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From within host dynamics to the epidemiology of infectious disease: Scientific overview and challenges.

Gutierrez JB, Galinski MR, Cantrell S, Voit EO.

Math Biosci. 2015 Apr 15. pii: S0025-5564(15)00085-1. doi: 10.1016/j.mbs.2015.04.004. [Epub ahead of print]


150 years of the mass action law.

Voit EO, Martens HA, Omholt SW.

PLoS Comput Biol. 2015 Jan 8;11(1):e1004012. doi: 10.1371/journal.pcbi.1004012. eCollection 2015 Jan.


A U-system approach for predicting metabolic behaviors and responses based on an alleged metabolic reaction network.

Sriyudthsak K, Sawada Y, Chiba Y, Yamashita Y, Kanaya S, Onouchi H, Fujiwara T, Naito S, Voit EO, Shiraishi F, Hirai MY.

BMC Syst Biol. 2014;8 Suppl 5:S4. doi: 10.1186/1752-0509-8-S5-S4. Epub 2014 Dec 12.


A heuristic model of alcohol dependence.

Qi Z, Tretter F, Voit EO.

PLoS One. 2014 Mar 21;9(3):e92221. doi: 10.1371/journal.pone.0092221. eCollection 2014.


Rotenone and paraquat perturb dopamine metabolism: A computational analysis of pesticide toxicity.

Qi Z, Miller GW, Voit EO.

Toxicology. 2014 Jan 6;315:92-101. doi: 10.1016/j.tox.2013.11.003. Epub 2013 Nov 20.


Metabolic and transcriptional analysis of acid stress in Lactococcus lactis, with a focus on the kinetics of lactic acid pools.

Carvalho AL, Turner DL, Fonseca LL, Solopova A, Catarino T, Kuipers OP, Voit EO, Neves AR, Santos H.

PLoS One. 2013 Jul 3;8(7):e68470. doi: 10.1371/journal.pone.0068470. Print 2013.


Coordination of rapid sphingolipid responses to heat stress in yeast.

Chen PW, Fonseca LL, Hannun YA, Voit EO.

PLoS Comput Biol. 2013;9(5):e1003078. doi: 10.1371/journal.pcbi.1003078. Epub 2013 May 30.


The neurochemical mobile with non-linear interaction matrix: an exploratory computational model.

Qi Z, Fieni D, Tretter F, Voit EO.

Pharmacopsychiatry. 2013 May;46 Suppl 1:S53-63. doi: 10.1055/s-0033-1337920. Epub 2013 Apr 18. Review.


Mesoscopic modeling as a starting point for computational analyses of cystic fibrosis as a systemic disease.

Voit EO.

Biochim Biophys Acta. 2014 Jan;1844(1 Pt B):258-70. doi: 10.1016/j.bbapap.2013.03.023. Epub 2013 Apr 6.


Function and design of the Nox1 system in vascular smooth muscle cells.

Yin W, Voit EO.

BMC Syst Biol. 2013 Mar 11;7:20. doi: 10.1186/1752-0509-7-20.


Characterizability of metabolic pathway systems from time series data.

Voit EO.

Math Biosci. 2013 Dec;246(2):315-25. doi: 10.1016/j.mbs.2013.01.008. Epub 2013 Feb 5.


Functional analysis of metabolic channeling and regulation in lignin biosynthesis: a computational approach.

Lee Y, Escamilla-TreviƱo L, Dixon RA, Voit EO.

PLoS Comput Biol. 2012;8(11):e1002769. doi: 10.1371/journal.pcbi.1002769. Epub 2012 Nov 8.


A feel for systems.

Voit EO, Newstetter WC, Kemp ML.

Mol Syst Biol. 2012;8:609. doi: 10.1038/msb.2012.41. No abstract available.


Estimation of dynamic flux profiles from metabolic time series data.

Chou IC, Voit EO.

BMC Syst Biol. 2012 Jul 9;6:84. doi: 10.1186/1752-0509-6-84.


Mesoscopic models of neurotransmission as intermediates between disease simulators and tools for discovering design principles.

Voit EO, Qi Z, Kikuchi S.

Pharmacopsychiatry. 2012 May;45 Suppl 1:S22-30. doi: 10.1055/s-0032-1304653. Epub 2012 May 7. Review. Erratum in: Pharmacopsychiatry. 2012 May;45 Suppl 1:e1. Qui, Z [corrected to Qi, Z].


Canonical modeling of the multi-scale regulation of the heat stress response in yeast.

Fonseca LL, Chen PW, Voit EO.

Metabolites. 2012 Feb 27;2(1):221-41. doi: 10.3390/metabo2010221.


Mathematical modeling and validation of the ergosterol pathway in Saccharomyces cerevisiae.

Alvarez-Vasquez F, Riezman H, Hannun YA, Voit EO.

PLoS One. 2011;6(12):e28344. doi: 10.1371/journal.pone.0028344. Epub 2011 Dec 14.


Constructing stochastic models from deterministic process equations by propensity adjustment.

Wu J, Vidakovic B, Voit EO.

BMC Syst Biol. 2011 Nov 8;5:187. doi: 10.1186/1752-0509-5-187.


Impact of delays and noise on dopamine signal transduction.

Wu J, Qi Z, Voit EO.

Stud Health Technol Inform. 2011;162:222-35.


Integrative analysis of transgenic alfalfa (Medicago sativa L.) suggests new metabolic control mechanisms for monolignol biosynthesis.

Lee Y, Chen F, Gallego-Giraldo L, Dixon RA, Voit EO.

PLoS Comput Biol. 2011 May;7(5):e1002047. doi: 10.1371/journal.pcbi.1002047. Epub 2011 May 19.

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