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Items: 1 to 20 of 38


Cross-Bridge Group Ensembles Describing Cooperativity in Thermodynamically Consistent Way.

Kalda M, Peterson P, Vendelin M.

PLoS One. 2015 Sep 11;10(9):e0137438. doi: 10.1371/journal.pone.0137438. eCollection 2015.


The location of energetic compartments affects energetic communication in cardiomyocytes.

Birkedal R, Laasmaa M, Vendelin M.

Front Physiol. 2014 Sep 29;5:376. doi: 10.3389/fphys.2014.00376. eCollection 2014.


Tight coupling of Na+/K+-ATPase with glycolysis demonstrated in permeabilized rat cardiomyocytes.

Sepp M, Sokolova N, Jugai S, Mandel M, Peterson P, Vendelin M.

PLoS One. 2014 Jun 16;9(6):e99413. doi: 10.1371/journal.pone.0099413. eCollection 2014.


ADP protects cardiac mitochondria under severe oxidative stress.

Sokolova N, Pan S, Provazza S, Beutner G, Vendelin M, Birkedal R, Sheu SS.

PLoS One. 2013 Dec 13;8(12):e83214. doi: 10.1371/journal.pone.0083214. eCollection 2013.


Unchanged mitochondrial organization and compartmentation of high-energy phosphates in creatine-deficient GAMT-/- mouse hearts.

Branovets J, Sepp M, Kotlyarova S, Jepihhina N, Sokolova N, Aksentijevic D, Lygate CA, Neubauer S, Vendelin M, Birkedal R.

Am J Physiol Heart Circ Physiol. 2013 Aug 15;305(4):H506-20. doi: 10.1152/ajpheart.00919.2012. Epub 2013 Jun 21.


Real-time determination of sarcomere length of a single cardiomyocyte during contraction.

Peterson P, Kalda M, Vendelin M.

Am J Physiol Cell Physiol. 2013 Mar;304(6):C519-31. doi: 10.1152/ajpcell.00032.2012. Epub 2012 Dec 19.


Sensitivity analysis of flux determination in heart by H₂ ¹⁸O -provided labeling using a dynamic Isotopologue model of energy transfer pathways.

Schryer DW, Peterson P, Illaste A, Vendelin M.

PLoS Comput Biol. 2012;8(12):e1002795. doi: 10.1371/journal.pcbi.1002795. Epub 2012 Dec 6.


Analysis of molecular movement reveals latticelike obstructions to diffusion in heart muscle cells.

Illaste A, Laasmaa M, Peterson P, Vendelin M.

Biophys J. 2012 Feb 22;102(4):739-48. doi: 10.1016/j.bpj.2012.01.012. Epub 2012 Feb 21.


Molecular dynamics simulations of creatine kinase and adenine nucleotide translocase in mitochondrial membrane patch.

Karo J, Peterson P, Vendelin M.

J Biol Chem. 2012 Mar 2;287(10):7467-76. doi: 10.1074/jbc.M111.332320. Epub 2012 Jan 12.


Permeabilized rat cardiomyocyte response demonstrates intracellular origin of diffusion obstacles.

Jepihhina N, Beraud N, Sepp M, Birkedal R, Vendelin M.

Biophys J. 2011 Nov 2;101(9):2112-21. doi: 10.1016/j.bpj.2011.09.025. Epub 2011 Nov 1.


Symbolic flux analysis for genome-scale metabolic networks.

Schryer DW, Vendelin M, Peterson P.

BMC Syst Biol. 2011 May 23;5:81. doi: 10.1186/1752-0509-5-81.


Application of regularized Richardson-Lucy algorithm for deconvolution of confocal microscopy images.

Laasmaa M, Vendelin M, Peterson P.

J Microsc. 2011 Aug;243(2):124-40. doi: 10.1111/j.1365-2818.2011.03486.x. Epub 2011 Feb 15.


Modulation of energy transfer pathways between mitochondria and myofibrils by changes in performance of perfused heart.

Vendelin M, Hoerter JA, Mateo P, Soboll S, Gillet B, Mazet JL.

J Biol Chem. 2010 Nov 26;285(48):37240-50. doi: 10.1074/jbc.M110.147116. Epub 2010 Sep 16.


ADP compartmentation analysis reveals coupling between pyruvate kinase and ATPases in heart muscle.

Sepp M, Vendelin M, Vija H, Birkedal R.

Biophys J. 2010 Jun 16;98(12):2785-93. doi: 10.1016/j.bpj.2010.03.025.


Intracellular diffusion restrictions in isolated cardiomyocytes from rainbow trout.

Sokolova N, Vendelin M, Birkedal R.

BMC Cell Biol. 2009 Dec 17;10:90. doi: 10.1186/1471-2121-10-90.


Diffusion restrictions surrounding mitochondria: a mathematical model of heart muscle fibers.

Ramay HR, Vendelin M.

Biophys J. 2009 Jul 22;97(2):443-52. doi: 10.1016/j.bpj.2009.04.062.


Bidirectionality and compartmentation of metabolic fluxes are revealed in the dynamics of isotopomer networks.

Schryer DW, Peterson P, Paalme T, Vendelin M.

Int J Mol Sci. 2009 Apr 17;10(4):1697-718. doi: 10.3390/ijms10041697. Review.


Anisotropic diffusion of fluorescently labeled ATP in rat cardiomyocytes determined by raster image correlation spectroscopy.

Vendelin M, Birkedal R.

Am J Physiol Cell Physiol. 2008 Nov;295(5):C1302-15. doi: 10.1152/ajpcell.00313.2008. Epub 2008 Sep 24.


The creatine kinase phosphotransfer network: thermodynamic and kinetic considerations, the impact of the mitochondrial outer membrane and modelling approaches.

Saks V, Kaambre T, Guzun R, Anmann T, Sikk P, Schlattner U, Wallimann T, Aliev M, Vendelin M.

Subcell Biochem. 2007;46:27-65. Review.


Regulation of respiration in brain mitochondria and synaptosomes: restrictions of ADP diffusion in situ, roles of tubulin, and mitochondrial creatine kinase.

Monge C, Beraud N, Kuznetsov AV, Rostovtseva T, Sackett D, Schlattner U, Vendelin M, Saks VA.

Mol Cell Biochem. 2008 Nov;318(1-2):147-65. doi: 10.1007/s11010-008-9865-7. Epub 2008 Jul 16.

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