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Results: 1 to 20 of 32

1.

Assessment of accuracy and precision of quantification of ultra-widefield images.

Sagong M, van Hemert J, Olmos de Koo LC, Barnett C, Sadda SR.

Ophthalmology. 2015 Apr;122(4):864-6. doi: 10.1016/j.ophtha.2014.11.016. Epub 2015 Jan 8. No abstract available.

PMID:
25576995
2.

Blood vessel segmentation and width estimation in ultra-wide field scanning laser ophthalmoscopy.

Pellegrini E, Robertson G, Trucco E, MacGillivray TJ, Lupascu C, van Hemert J, Williams MC, Newby DE, van Beek EJ, Houston G.

Biomed Opt Express. 2014 Nov 17;5(12):4329-4337. eCollection 2014 Dec 1.

3.

Retinal Area Detector from Scanning Laser Ophthalmoscope (SLO) Images for Diagnosing Retinal Diseases.

Haleem MS, Han L, van Hemert J, Li B, Fleming A.

IEEE J Biomed Health Inform. 2014 Aug 26. [Epub ahead of print]

PMID:
25167560
4.

Precise montaging and metric quantification of retinal surface area from ultra-widefield fundus photography and fluorescein angiography.

Croft DE, van Hemert J, Wykoff CC, Clifton D, Verhoek M, Fleming A, Brown DM.

Ophthalmic Surg Lasers Imaging Retina. 2014 Jul-Aug;45(4):312-7. doi: 10.3928/23258160-20140709-07.

PMID:
25037013
5.

Histatin 5 binds to Porphyromonas gingivalis hemagglutinin B (HagB) and alters HagB-induced chemokine responses.

Borgwardt DS, Martin AD, Van Hemert JR, Yang J, Fischer CL, Recker EN, Nair PR, Vidva R, Chandrashekaraiah S, Progulske-Fox A, Drake D, Cavanaugh JE, Vali S, Zhang Y, Brogden KA.

Sci Rep. 2014 Jan 29;4:3904. doi: 10.1038/srep03904.

6.

Automatic extraction of retinal features from colour retinal images for glaucoma diagnosis: a review.

Haleem MS, Han L, van Hemert J, Li B.

Comput Med Imaging Graph. 2013 Oct-Dec;37(7-8):581-96. doi: 10.1016/j.compmedimag.2013.09.005. Epub 2013 Sep 27. Review.

PMID:
24139134
7.

Towards automatic detection of abnormal retinal capillaries in ultra-widefield-of-view retinal angiographic exams.

Zutis K, Trucco E, Hubschman JP, Reed D, Shah S, van Hemert J.

Conf Proc IEEE Eng Med Biol Soc. 2013;2013:7372-5. doi: 10.1109/EMBC.2013.6611261.

PMID:
24111448
8.

Human β-defensin-3 alters, but does not inhibit, the binding of Porphyromonas gingivalis haemagglutinin B to the surface of human dendritic cells.

Van Hemert JR, Recker EN, Dietrich D, Progulske-Fox A, Kurago ZB, Walters KS, Cavanaugh JE, Brogden KA.

Int J Antimicrob Agents. 2012 Jul;40(1):75-9. doi: 10.1016/j.ijantimicag.2012.03.007. Epub 2012 May 9.

9.

Comparative analysis of grapevine whole-genome gene predictions, functional annotation, categorization and integration of the predicted gene sequences.

Grimplet J, Van Hemert J, Carbonell-Bejerano P, Díaz-Riquelme J, Dickerson J, Fennell A, Pezzotti M, Martínez-Zapater JM.

BMC Res Notes. 2012 May 3;5:213. doi: 10.1186/1756-0500-5-213.

10.

EnzML: multi-label prediction of enzyme classes using InterPro signatures.

De Ferrari L, Aitken S, van Hemert J, Goryanin I.

BMC Bioinformatics. 2012 Apr 25;13:61. doi: 10.1186/1471-2105-13-61.

11.

Discriminating response groups in metabolic and regulatory pathway networks.

Van Hemert JL, Dickerson JA.

Bioinformatics. 2012 Apr 1;28(7):947-54. doi: 10.1093/bioinformatics/bts039. Epub 2012 Feb 4.

12.

PLEXdb: gene expression resources for plants and plant pathogens.

Dash S, Van Hemert J, Hong L, Wise RP, Dickerson JA.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1194-201. doi: 10.1093/nar/gkr938. Epub 2011 Nov 13.

13.

Validation and mismatch repair of workflows through typed data streams.

Yaikhom G, Atkinson MP, van Hemert JI, Corcho O, Krause A.

Philos Trans A Math Phys Eng Sci. 2011 Aug 28;369(1949):3285-99. doi: 10.1098/rsta.2011.0135.

PMID:
21768140
14.

Performance database: capturing data for optimizing distributed streaming workflows.

Liew CS, Atkinson MP, Ostrowski R, Cole M, van Hemert JI, Han L.

Philos Trans A Math Phys Eng Sci. 2011 Aug 28;369(1949):3268-84. doi: 10.1098/rsta.2011.0134.

PMID:
21768139
15.

A user-friendly web portal for T-Coffee on supercomputers.

Rius J, Cores F, Solsona F, van Hemert JI, Koetsier J, Notredame C.

BMC Bioinformatics. 2011 May 12;12:150. doi: 10.1186/1471-2105-12-150.

16.

CytoModeler: a tool for bridging large-scale network analysis and dynamic quantitative modeling.

Xia T, Van Hemert J, Dickerson JA.

Bioinformatics. 2011 Jun 1;27(11):1578-80. doi: 10.1093/bioinformatics/btr150. Epub 2011 Apr 20.

17.

Automatically identifying and annotating mouse embryo gene expression patterns.

Han L, van Hemert JI, Baldock RA.

Bioinformatics. 2011 Apr 15;27(8):1101-7. doi: 10.1093/bioinformatics/btr105. Epub 2011 Feb 25.

18.

A garter snake transcriptome: pyrosequencing, de novo assembly, and sex-specific differences.

Schwartz TS, Tae H, Yang Y, Mockaitis K, Van Hemert JL, Proulx SR, Choi JH, Bronikowski AM.

BMC Genomics. 2010 Dec 7;11:694. doi: 10.1186/1471-2164-11-694.

19.

PathwayAccess: CellDesigner plugins for pathway databases.

Van Hemert JL, Dickerson JA.

Bioinformatics. 2010 Sep 15;26(18):2345-6. doi: 10.1093/bioinformatics/btq423. Epub 2010 Jul 20.

20.

Monte Carlo randomization tests for large-scale abundance datasets on the GPU.

Van Hemert JL, Dickerson JA.

Comput Methods Programs Biomed. 2011 Jan;101(1):80-6. doi: 10.1016/j.cmpb.2010.04.010. Epub 2010 Jun 11.

PMID:
20541280
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