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Results: 1 to 20 of 97

1.

Systemic Suppression of the Shoot Metabolism upon Rice Root Nematode Infection.

Kyndt T, Denil S, Bauters L, Van Criekinge W, De Meyer T.

PLoS One. 2014 Sep 12;9(9):e106858. doi: 10.1371/journal.pone.0106858. eCollection 2014.

PMID:
25216177
[PubMed - in process]
Free PMC Article
2.

We are all individuals… bioinformatics in the personalized medicine era.

Van Neste L, Van Criekinge W.

Cell Oncol (Dordr). 2014 Sep 10. [Epub ahead of print]

PMID:
25204962
[PubMed - as supplied by publisher]
3.

Illumina sequencing of 15 deafness genes using fragmented amplicons.

Van Nieuwerburgh F, De Keulenaer S, De Schrijver J, Vandesompele J, Van Criekinge W, Coucke PJ, Deforce D.

BMC Res Notes. 2014 Aug 9;7(1):509. doi: 10.1186/1756-0500-7-509.

PMID:
25106482
[PubMed - in process]
Free Article
4.

Food-derived opioid peptides inhibit cysteine uptake with redox and epigenetic consequences.

Trivedi MS, Shah JS, Al-Mughairy S, Hodgson NW, Simms B, Trooskens GA, Van Criekinge W, Deth RC.

J Nutr Biochem. 2014 Oct;25(10):1011-8. doi: 10.1016/j.jnutbio.2014.05.004. Epub 2014 Jun 6.

PMID:
25018147
[PubMed - in process]
Free Article
5.

Reduced Rate of Repeated Prostate Biopsies Observed in ConfirmMDx Clinical Utility Field Study.

Wojno KJ, Costa FJ, Cornell RJ, Small JD, Pasin E, Van Criekinge W, Bigley JW, Van Neste L.

Am Health Drug Benefits. 2014 May;7(3):129-34.

PMID:
24991397
[PubMed]
Free PMC Article
6.

Bacterial diversity assessment in Antarctic terrestrial and aquatic microbial mats: a comparison between bidirectional pyrosequencing and cultivation.

Tytgat B, Verleyen E, Obbels D, Peeters K, De Wever A, D'hondt S, De Meyer T, Van Criekinge W, Vyverman W, Willems A.

PLoS One. 2014 Jun 2;9(6):e97564. doi: 10.1371/journal.pone.0097564. eCollection 2014.

PMID:
24887330
[PubMed - in process]
Free PMC Article
7.

Clinical Validation of an Epigenetic Assay to Predict Negative Histopathological Results in Repeat Prostate Biopsies.

Partin AW, Van Neste L, Klein EA, Marks LS, Gee JR, Troyer DA, Rieger-Christ K, Jones JS, Magi-Galluzzi C, Mangold LA, Trock BJ, Lance RS, Bigley JW, Van Criekinge W, Epstein JI.

J Urol. 2014 Apr 18. pii: S0022-5347(14)03341-2. doi: 10.1016/j.juro.2014.04.013. [Epub ahead of print]

PMID:
24747657
[PubMed - as supplied by publisher]
8.

N-terminal proteomics and ribosome profiling provide a comprehensive view of the alternative translation initiation landscape in mice and men.

Van Damme P, Gawron D, Van Criekinge W, Menschaert G.

Mol Cell Proteomics. 2014 May;13(5):1245-61. doi: 10.1074/mcp.M113.036442. Epub 2014 Mar 12.

PMID:
24623590
[PubMed - in process]
9.

My-Forensic-Loci-queries (MyFLq) framework for analysis of forensic STR data generated by massive parallel sequencing.

Van Neste C, Vandewoestyne M, Van Criekinge W, Deforce D, Van Nieuwerburgh F.

Forensic Sci Int Genet. 2014 Mar;9:1-8. doi: 10.1016/j.fsigen.2013.10.012. Epub 2013 Oct 31.

PMID:
24528572
[PubMed - in process]
Free Article
10.

Emerging evidence for CHFR as a cancer biomarker: from tumor biology to precision medicine.

Derks S, Cleven AH, Melotte V, Smits KM, Brandes JC, Azad N, van Criekinge W, de Bruïne AP, Herman JG, van Engeland M.

Cancer Metastasis Rev. 2013 Dec 28. [Epub ahead of print]

PMID:
24375389
[PubMed - as supplied by publisher]
Free PMC Article
11.

Staphylococcal enterotoxin B influences the DNA methylation pattern in nasal polyp tissue: a preliminary study.

Pérez-Novo CA, Zhang Y, Denil S, Trooskens G, De Meyer T, Van Criekinge W, Van Cauwenberge P, Zhang L, Bachert C.

Allergy Asthma Clin Immunol. 2013 Dec 16;9(1):48. doi: 10.1186/1710-1492-9-48.

PMID:
24341752
[PubMed]
Free PMC Article
12.

Next-generation technologies and data analytical approaches for epigenomics.

Mensaert K, Denil S, Trooskens G, Van Criekinge W, Thas O, De Meyer T.

Environ Mol Mutagen. 2014 Apr;55(3):155-70. doi: 10.1002/em.21841. Epub 2013 Dec 10. Review.

PMID:
24327356
[PubMed - indexed for MEDLINE]
13.

MEN1 gene mutation and reduced expression are associated with poor prognosis in pulmonary carcinoids.

Swarts DR, Scarpa A, Corbo V, Van Criekinge W, van Engeland M, Gatti G, Henfling ME, Papotti M, Perren A, Ramaekers FC, Speel EJ, Volante M.

J Clin Endocrinol Metab. 2014 Feb;99(2):E374-8. doi: 10.1210/jc.2013-2782. Epub 2013 Nov 25.

PMID:
24276465
[PubMed - indexed for MEDLINE]
14.

Genome-wide methylation profiling reveals Zinc finger protein 516 (ZNF516) and FK-506-binding protein 6 (FKBP6) promoters frequently methylated in cervical neoplasia, associated with HPV status and ethnicity in a Chilean population.

Brebi P, Maldonado L, Noordhuis MG, Ili C, Leal P, Garcia P, Brait M, Ribas J, Michailidi C, Perez J, Soudry E, Tapia O, Guzman P, Muñoz S, Van Neste L, Van Criekinge W, Irizarry R, Sidransky D, Roa JC, Guerrero-Preston R.

Epigenetics. 2014 Feb 1;9(2):308-17. doi: 10.4161/epi.27120. Epub 2013 Nov 15.

PMID:
24241165
[PubMed - in process]
15.

The effect of VEGF-targeted therapy on biomarker expression in sequential tissue from patients with metastatic clear cell renal cancer.

Sharpe K, Stewart GD, Mackay A, Van Neste C, Rofe C, Berney D, Kayani I, Bex A, Wan E, O'Mahony FC, O'Donnell M, Chowdhury S, Doshi R, Ho-Yen C, Gerlinger M, Baker D, Smith N, Davies B, Sahdev A, Boleti E, De Meyer T, Van Criekinge W, Beltran L, Lu YJ, Harrison DJ, Reynolds AR, Powles T.

Clin Cancer Res. 2013 Dec 15;19(24):6924-34. doi: 10.1158/1078-0432.CCR-13-1631. Epub 2013 Oct 15.

PMID:
24130073
[PubMed - indexed for MEDLINE]
16.

Combining in silico prediction and ribosome profiling in a genome-wide search for novel putatively coding sORFs.

Crappé J, Van Criekinge W, Trooskens G, Hayakawa E, Luyten W, Baggerman G, Menschaert G.

BMC Genomics. 2013 Sep 23;14:648. doi: 10.1186/1471-2164-14-648.

PMID:
24059539
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

An exploration of pathways involved in lung carcinoid progression using gene expression profiling.

Swarts DR, Van Neste L, Henfling ME, Eijkenboom I, Eijk PP, van Velthuysen ML, Vink A, Volante M, Ylstra B, Van Criekinge W, van Engeland M, Ramaekers FC, Speel EJ.

Carcinogenesis. 2013 Dec;34(12):2726-37. doi: 10.1093/carcin/bgt271. Epub 2013 Aug 8.

PMID:
23929435
[PubMed - indexed for MEDLINE]
18.

Transcriptional analysis through RNA sequencing of giant cells induced by Meloidogyne graminicola in rice roots.

Ji H, Gheysen G, Denil S, Lindsey K, Topping JF, Nahar K, Haegeman A, De Vos WH, Trooskens G, Van Criekinge W, De Meyer T, Kyndt T.

J Exp Bot. 2013 Sep;64(12):3885-98. doi: 10.1093/jxb/ert219. Epub 2013 Jul 23.

PMID:
23881398
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The CpG island methylator phenotype: what's in a name?

Hughes LA, Melotte V, de Schrijver J, de Maat M, Smit VT, Bovée JV, French PJ, van den Brandt PA, Schouten LJ, de Meyer T, van Criekinge W, Ahuja N, Herman JG, Weijenberg MP, van Engeland M.

Cancer Res. 2013 Oct 1;73(19):5858-68. doi: 10.1158/0008-5472.CAN-12-4306. Epub 2013 Jun 25.

PMID:
23801749
[PubMed - indexed for MEDLINE]
20.

Methylation-specific digital karyotyping of HPV16E6E7-expressing human keratinocytes identifies novel methylation events in cervical carcinogenesis.

Steenbergen RD, Ongenaert M, Snellenberg S, Trooskens G, van der Meide WF, Pandey D, Bloushtain-Qimron N, Polyak K, Meijer CJ, Snijders PJ, Van Criekinge W.

J Pathol. 2013 Sep;231(1):53-62. doi: 10.1002/path.4210. Epub 2013 Jul 8.

PMID:
23674368
[PubMed - indexed for MEDLINE]

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