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Results: 1 to 20 of 62

1.

The RNA-binding protein HuR is essential for the B cell antibody response.

Diaz-Muñoz MD, Bell SE, Fairfax K, Monzon-Casanova E, Cunningham AF, Gonzalez-Porta M, Andrews SR, Bunik VI, Zarnack K, Curk T, Heggermont WA, Heymans S, Gibson GE, Kontoyiannis DL, Ule J, Turner M.

Nat Immunol. 2015 Feb 23. doi: 10.1038/ni.3115. [Epub ahead of print]

PMID:
25706746
[PubMed - as supplied by publisher]
2.

Splicing changes in SMA mouse motoneurons and SMN-depleted neuroblastoma cells: Evidence for involvement of splicing regulatory proteins.

Huo Q, Kayikci M, Odermatt P, Meyer K, Michels O, Saxena S, Ule J, Schümperli D.

RNA Biol. 2014 Nov 2;11(11):1430-47. doi: 10.1080/15476286.2014.996494.

PMID:
25692239
[PubMed - in process]
3.

Nuclear matrix protein Matrin3 regulates alternative splicing and forms overlapping regulatory networks with PTB.

Coelho MB, Attig J, Bellora N, König J, Hallegger M, Kayikci M, Eyras E, Ule J, Smith CW.

EMBO J. 2015 Jan 19. pii: e201489852. [Epub ahead of print]

PMID:
25599992
[PubMed - as supplied by publisher]
Free Article
4.

Promiscuous RNA binding ensures effective encapsidation of APOBEC3 proteins by HIV-1.

Apolonia L, Schulz R, Curk T, Rocha P, Swanson CM, Schaller T, Ule J, Malim MH.

PLoS Pathog. 2015 Jan 15;11(1):e1004609. doi: 10.1371/journal.ppat.1004609. eCollection 2015 Jan.

PMID:
25590131
[PubMed - in process]
Free PMC Article
5.

The coilin interactome identifies hundreds of small noncoding RNAs that traffic through Cajal bodies.

Machyna M, Kehr S, Straube K, Kappei D, Buchholz F, Butter F, Ule J, Hertel J, Stadler PF, Neugebauer KM.

Mol Cell. 2014 Nov 6;56(3):389-99. doi: 10.1016/j.molcel.2014.10.004. Epub 2014 Nov 6.

PMID:
25514182
[PubMed - indexed for MEDLINE]
6.

3' UTR length and messenger ribonucleoprotein composition determine endocleavage efficiencies at termination codons.

Boehm V, Haberman N, Ottens F, Ule J, Gehring NH.

Cell Rep. 2014 Oct 23;9(2):555-68. doi: 10.1016/j.celrep.2014.09.012. Epub 2014 Oct 9.

PMID:
25310981
[PubMed - in process]
Free Article
7.

CPSF30 and Wdr33 directly bind to AAUAAA in mammalian mRNA 3' processing.

Chan SL, Huppertz I, Yao C, Weng L, Moresco JJ, Yates JR 3rd, Ule J, Manley JL, Shi Y.

Genes Dev. 2014 Nov 1;28(21):2370-80. doi: 10.1101/gad.250993.114. Epub 2014 Oct 9.

PMID:
25301780
[PubMed - indexed for MEDLINE]
8.

A global regulatory mechanism for activating an exon network required for neurogenesis.

Raj B, Irimia M, Braunschweig U, Sterne-Weiler T, O'Hanlon D, Lin ZY, Chen GI, Easton LE, Ule J, Gingras AC, Eyras E, Blencowe BJ.

Mol Cell. 2014 Oct 2;56(1):90-103. doi: 10.1016/j.molcel.2014.08.011. Epub 2014 Sep 11.

PMID:
25219497
[PubMed - indexed for MEDLINE]
9.

Rbfox2-coordinated alternative splicing of Mef2d and Rock2 controls myoblast fusion during myogenesis.

Singh RK, Xia Z, Bland CS, Kalsotra A, Scavuzzo MA, Curk T, Ule J, Li W, Cooper TA.

Mol Cell. 2014 Aug 21;55(4):592-603. doi: 10.1016/j.molcel.2014.06.035. Epub 2014 Jul 31.

PMID:
25087874
[PubMed - indexed for MEDLINE]
10.

Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders.

Blanco S, Dietmann S, Flores JV, Hussain S, Kutter C, Humphreys P, Lukk M, Lombard P, Treps L, Popis M, Kellner S, Hölter SM, Garrett L, Wurst W, Becker L, Klopstock T, Fuchs H, Gailus-Durner V, Hrabĕ de Angelis M, Káradóttir RT, Helm M, Ule J, Gleeson JG, Odom DT, Frye M.

EMBO J. 2014 Sep 17;33(18):2020-39. doi: 10.15252/embj.201489282. Epub 2014 Jul 25.

PMID:
25063673
[PubMed - indexed for MEDLINE]
Free Article
11.

Crosslinking-immunoprecipitation (iCLIP) analysis reveals global regulatory roles of hnRNP L.

Rossbach O, Hung LH, Khrameeva E, Schreiner S, König J, Curk T, Zupan B, Ule J, Gelfand MS, Bindereif A.

RNA Biol. 2014 Feb;11(2):146-55. doi: 10.4161/rna.27991. Epub 2014 Feb 7.

PMID:
24526010
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

'Oming in on RNA-protein interactions.

Rinn JL, Ule J.

Genome Biol. 2014 Jan 31;15(1):401. doi: 10.1186/gb4158. No abstract available.

PMID:
24485348
[PubMed - in process]
Free PMC Article
13.

RNAmotifs: prediction of multivalent RNA motifs that control alternative splicing.

Cereda M, Pozzoli U, Rot G, Juvan P, Schweitzer A, Clark T, Ule J.

Genome Biol. 2014 Jan 31;15(1):R20. doi: 10.1186/gb-2014-15-1-r20.

PMID:
24485098
[PubMed - in process]
Free PMC Article
14.

Hexanucleotide repeats in ALS/FTD form length-dependent RNA foci, sequester RNA binding proteins, and are neurotoxic.

Lee YB, Chen HJ, Peres JN, Gomez-Deza J, Attig J, Stalekar M, Troakes C, Nishimura AL, Scotter EL, Vance C, Adachi Y, Sardone V, Miller JW, Smith BN, Gallo JM, Ule J, Hirth F, Rogelj B, Houart C, Shaw CE.

Cell Rep. 2013 Dec 12;5(5):1178-86. doi: 10.1016/j.celrep.2013.10.049. Epub 2013 Nov 27.

PMID:
24290757
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Alu elements: at the crossroads between disease and evolution.

Ule J.

Biochem Soc Trans. 2013 Dec;41(6):1532-5. doi: 10.1042/BST20130157. Review.

PMID:
24256249
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Molecular basis of UG-rich RNA recognition by the human splicing factor TDP-43.

Lukavsky PJ, Daujotyte D, Tollervey JR, Ule J, Stuani C, Buratti E, Baralle FE, Damberger FF, Allain FH.

Nat Struct Mol Biol. 2013 Dec;20(12):1443-9. doi: 10.1038/nsmb.2698. Epub 2013 Nov 17.

PMID:
24240615
[PubMed - indexed for MEDLINE]
17.

What, where, and when: the importance of post-transcriptional regulation in the brain.

Kiebler MA, Scheiffele P, Ule J.

Front Neurosci. 2013 Oct 29;7:192. doi: 10.3389/fnins.2013.00192. eCollection 2013. No abstract available.

PMID:
24194693
[PubMed]
Free PMC Article
18.

iCLIP: protein-RNA interactions at nucleotide resolution.

Huppertz I, Attig J, D'Ambrogio A, Easton LE, Sibley CR, Sugimoto Y, Tajnik M, König J, Ule J.

Methods. 2014 Feb;65(3):274-87. doi: 10.1016/j.ymeth.2013.10.011. Epub 2013 Oct 25.

PMID:
24184352
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

NSun2-mediated cytosine-5 methylation of vault noncoding RNA determines its processing into regulatory small RNAs.

Hussain S, Sajini AA, Blanco S, Dietmann S, Lombard P, Sugimoto Y, Paramor M, Gleeson JG, Odom DT, Ule J, Frye M.

Cell Rep. 2013 Jul 25;4(2):255-61. doi: 10.1016/j.celrep.2013.06.029. Epub 2013 Jul 18.

PMID:
23871666
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Sixty years of genome biology.

Doolittle WF, Fraser P, Gerstein MB, Graveley BR, Henikoff S, Huttenhower C, Oshlack A, Ponting CP, Rinn JL, Schatz MC, Ule J, Weigel D, Weinstock GM.

Genome Biol. 2013 Apr 25;14(4):113. doi: 10.1186/gb-2013-14-4-113.

PMID:
23651518
[PubMed - in process]
Free PMC Article
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