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Items: 16

1.

Cell-Free DNA Analysis of Targeted Genomic Regions in Maternal Plasma for Non-Invasive Prenatal Testing of Trisomy 21, Trisomy 18, Trisomy 13 and Fetal Sex.

Koumbaris G, Kypri E, Tsangaras K, Achilleos A, Mina P, Neofytou M, Velissariou V, Georgia C, Kallikas I, González-Liñán A, Benusiene E, Latos-Bielenska A, Marek P, Santana A, Nagy N, Széll M, Laudanski P, Papageorgiou EA, Ioannides M, Patsalis PC.

Clin Chem. 2016 Apr 26. pii: clinchem.2015.252502. [Epub ahead of print]

PMID:
27117469
2.

Erratum for Alfano et al., Episodic Diversifying Selection Shaped the Genomes of Gibbon Ape Leukemia Virus and Related Gammaretroviruses.

Alfano N, Kolokotronis SO, Tsangaras K, Roca AL, Xu W, Eiden MV, Greenwood AD.

J Virol. 2016 Mar 28;90(8):4254. doi: 10.1128/JVI.00210-16. Print 2016 Apr 15. No abstract available.

3.

Evolutionary Relationships among Extinct and Extant Sloths: The Evidence of Mitogenomes and Retroviruses.

Slater GJ, Cui P, Forasiepi AM, Lenz D, Tsangaras K, Voirin B, de Moraes-Barros N, MacPhee RD, Greenwood AD.

Genome Biol Evol. 2016 Feb 14;8(3):607-21. doi: 10.1093/gbe/evw023.

4.

Episodic Diversifying Selection Shaped the Genomes of Gibbon Ape Leukemia Virus and Related Gammaretroviruses.

Alfano N, Kolokotronis SO, Tsangaras K, Roca AL, Xu W, Eiden MV, Greenwood AD.

J Virol. 2015 Dec 4;90(4):1757-72. doi: 10.1128/JVI.02745-15. Erratum in: J Virol. 2016 Apr 15;90(8):4254.

PMID:
26637454
5.

An Evolutionarily Young Polar Bear (Ursus maritimus) Endogenous Retrovirus Identified from Next Generation Sequence Data.

Tsangaras K, Mayer J, Alquezar-Planas DE, Greenwood AD.

Viruses. 2015 Nov 24;7(11):6089-107. doi: 10.3390/v7112927.

6.

Sequence variation of koala retrovirus transmembrane protein p15E among koalas from different geographic regions.

Ishida Y, McCallister C, Nikolaidis N, Tsangaras K, Helgen KM, Greenwood AD, Roca AL.

Virology. 2015 Jan 15;475:28-36. doi: 10.1016/j.virol.2014.10.036. Epub 2014 Nov 22.

7.

Hybridization capture using short PCR products enriches small genomes by capturing flanking sequences (CapFlank).

Tsangaras K, Wales N, Sicheritz-Pontén T, Rasmussen S, Michaux J, Ishida Y, Morand S, Kampmann ML, Gilbert MT, Greenwood AD.

PLoS One. 2014 Oct 2;9(10):e109101. doi: 10.1371/journal.pone.0109101. eCollection 2014.

8.

Negative purifying selection drives prion and doppel protein evolution.

Tsangaras K, Kolokotronis SO, Ulrich RG, Morand S, Michaux J, Greenwood AD.

J Mol Evol. 2014 Aug;79(1-2):12-20. doi: 10.1007/s00239-014-9632-1. Epub 2014 Jul 20.

PMID:
25038839
9.

Biogeography and taxonomy of extinct and endangered monk seals illuminated by ancient DNA and skull morphology.

Scheel DM, Slater GJ, Kolokotronis SO, Potter CW, Rotstein DS, Tsangaras K, Greenwood AD, Helgen KM.

Zookeys. 2014 May 14;(409):1-33. doi: 10.3897/zookeys.409.6244. eCollection 2014.

10.

Hybridization capture reveals evolution and conservation across the entire Koala retrovirus genome.

Tsangaras K, Siracusa MC, Nikolaidis N, Ishida Y, Cui P, Vielgrader H, Helgen KM, Roca AL, Greenwood AD.

PLoS One. 2014 Apr 21;9(4):e95633. doi: 10.1371/journal.pone.0095633. eCollection 2014.

11.

Polar bear encephalitis: establishment of a comprehensive next-generation pathogen analysis pipeline for captive and free-living wildlife.

Szentiks CA, Tsangaras K, Abendroth B, Scheuch M, Stenglein MD, Wohlsein P, Heeger F, Höveler R, Chen W, Sun W, Damiani A, Nikolin V, Gruber AD, Grobbel M, Kalthoff D, Höper D, Czirják GÁ, Derisi J, Mazzoni CJ, Schüle A, Aue A, East ML, Hofer H, Beer M, Osterrieder N, Greenwood AD.

J Comp Pathol. 2014 May;150(4):474-88. doi: 10.1016/j.jcpa.2013.12.005. Epub 2013 Dec 19.

PMID:
24534459
12.

A novel endogenous betaretrovirus group characterized from polar bears (Ursus maritimus) and giant pandas (Ailuropoda melanoleuca).

Mayer J, Tsangaras K, Heeger F, Avila-Arcos M, Stenglein MD, Chen W, Sun W, Mazzoni CJ, Osterrieder N, Greenwood AD.

Virology. 2013 Aug 15;443(1):1-10. doi: 10.1016/j.virol.2013.05.008. Epub 2013 May 29.

13.

Historically low mitochondrial DNA diversity in koalas (Phascolarctos cinereus).

Tsangaras K, Ávila-Arcos MC, Ishida Y, Helgen KM, Roca AL, Greenwood AD.

BMC Genet. 2012 Oct 24;13:92. doi: 10.1186/1471-2156-13-92.

14.

One hundred twenty years of koala retrovirus evolution determined from museum skins.

Ávila-Arcos MC, Ho SY, Ishida Y, Nikolaidis N, Tsangaras K, Hönig K, Medina R, Rasmussen M, Fordyce SL, Calvignac-Spencer S, Willerslev E, Gilbert MT, Helgen KM, Roca AL, Greenwood AD.

Mol Biol Evol. 2013 Feb;30(2):299-304. doi: 10.1093/molbev/mss223. Epub 2012 Sep 14. Erratum in: Mol Biol Evol. 2013 May;30(5):1237.

15.

A potentially fatal mix of herpes in zoos.

Greenwood AD, Tsangaras K, Ho SY, Szentiks CA, Nikolin VM, Ma G, Damiani A, East ML, Lawrenz A, Hofer H, Osterrieder N.

Curr Biol. 2012 Sep 25;22(18):1727-31. doi: 10.1016/j.cub.2012.07.035. Epub 2012 Aug 16.

16.

Museums and disease: using tissue archive and museum samples to study pathogens.

Tsangaras K, Greenwood AD.

Ann Anat. 2012 Jan 20;194(1):58-73. doi: 10.1016/j.aanat.2011.04.003. Epub 2011 May 11. Review.

PMID:
21641784
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