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Items: 1 to 20 of 348

1.

Higher-order Lie symmetries in identifiability and predictability analysis of dynamic models.

Merkt B, Timmer J, Kaschek D.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Jul;92(1-1):012920. Epub 2015 Jul 28.

PMID:
26274260
2.

Representative Sinusoids for Hepatic Four-Scale Pharmacokinetics Simulations.

Schwen LO, Schenk A, Kreutz C, Timmer J, Bartolomé Rodríguez MM, Kuepfer L, Preusser T.

PLoS One. 2015 Jul 29;10(7):e0133653. doi: 10.1371/journal.pone.0133653. eCollection 2015.

3.

Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems.

Raue A, Steiert B, Schelker M, Kreutz C, Maiwald T, Hass H, Vanlier J, Tönsing C, Adlung L, Engesser R, Mader W, Heinemann T, Hasenauer J, Schilling M, Höfer T, Klipp E, Theis F, Klingmüller U, Schöberl B, Timmer J.

Bioinformatics. 2015 Jul 3. pii: btv405. [Epub ahead of print]

PMID:
26142188
4.

Zero coronary calcium in the presence of three-vessel and left main coronary artery disease in a Hodgkin lymphoma survivor.

Engbers EM, Mouden M, Jager PL, Timmer JR.

Neth Heart J. 2015 Jul;23(7-8):395-8. doi: 10.1007/s12471-015-0719-0.

5.

Networks: On the relation of bi- and multivariate measures.

Mader W, Mader M, Timmer J, Thiel M, Schelter B.

Sci Rep. 2015 Jun 4;5:10805. doi: 10.1038/srep10805.

6.

Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models.

Karr JR, Williams AH, Zucker JD, Raue A, Steiert B, Timmer J, Kreutz C; DREAM8 Parameter Estimation Challenge Consortium, Wilkinson S, Allgood BA, Bot BM, Hoff BR, Kellen MR, Covert MW, Stolovitzky GA, Meyer P.

PLoS Comput Biol. 2015 May 28;11(5):e1004096. doi: 10.1371/journal.pcbi.1004096. eCollection 2015 May.

7.

Poster Session 2: Monday 4 May 2015, 08:00-18:00Room: Poster Area.

Bouyoucef SE, Uusitalo V, Kamperidis V, De Graaf MA, Maaniitty T, Stenstrom I, Broersen A, Scholte AJ, Saraste A, Bax JJ, Knuuti J, Furuhashi T, Moroi M, Awaya T, Masai H, Minakawa M, Kunimasa T, Fukuda H, Sugi K, Berezin A, Kremzer A, Clerc OF, Kaufmann B, Possner M, Liga R, Vontobel J, Mikulicic F, Graeni C, Benz DC, Kaufmann PA, Buechel RB, Ferreira M, Cunha MJ, Albuquerque A, Ramos D, Costa G, Lima J, Pego M, Peix A, Cisneros L, Cabrera LO, Padron K, Rodriguez L, Heres F, Carrillo R, Mena E, Fernandez Y, Huizing ED, Van Dijk JD, Van Dalen JA, Timmer JR, Ottervanger JP, Slump CH, Jager PL, Venuraju S, Jeevarethinam A, Yerramasu A, Atwal S, Mehta VS, Lahiri A, Arjonilla Lopez A, Calero Rueda MJ, Gallardo G, Fernandez-Cuadrado J, Hernandez Aceituno D, Sanchez Hernandez J, Yoshida H, Mizukami A, Matsumura A, Smettei O, Abazid R, Sayed S, Mlynarska A, Mlynarski R, Golba K, Sosnowski M, Winther S, Svensson M, Jorgensen HS, Bouchelouche K, Gormsen LC, Holm NR, Botker HE, Ivarsen PR, Bottcher M, Cortes CM, Aramayo G EN, Daicz M, Casuscelli JF, Alaguibe ED, Neira Sepulveda A, Cerda M, Ganum GE, Embon M, Vigne J, Enilorac B, Lebasnier A, Valancogne L, Peyronnet D, Manrique A, Agostini D, Menendez D, Rajpal S, Kocherla C, Acharya M, Reddy P, Sazonova I, Ilushenkova Y, Batalov RE, Rogovskaya YV, Lishmanov YB, Popov SV, Varlamova NV, Prado Diaz S, Jimenez Rubio C, Gemma D, Refoyo Salicio E, Valbuena Lopez SC, Moreno Yanguela M, Torres M, Fernandez-Velilla M, Lopez-Sendon JL, Guzman Martinez G, Puente A, Rosales S, Martinez C, Cabada M, Melendez GM, Ferreira R, Gonzaga A, Santos J, Vijayan S, Smith S, Smith M, Muthusamy R, Takeishi Y, Oikawa M, Goral JL, Napoli J, Montana OR, Damico AC, Quiroz MC, Damico AE, Forcada PJ, Schmidberg JM, Zucchiatti NE, Olivieri DB, Jeevarethinam A, Venuraju S, Dumo A, Ruano S, Rakhit R, Davar J, Nair D, Cohen M, Darko D, Lahiri A, Yokota S, Ottervanger JP, Maas A, Mouden M, Timmer JR, Knollema S, Jager PL, Sanja Mazic SM, Lazovic B, Marina Djelic M, Jelena Suzic Lazic JS, Tijana Acimovic TA, Milica Deleva MD, Vesnina ZH, Zafrir N, Bental T, Mats I, Solodky A, Gutstein A, Hasid Y, Belzer D, Kornowski R, Ben Said R, Ben Mansour N, Ibn Haj Amor H, Chourabi C, Hagui A, Fehri W, Hawala H, Shugushev Z, Patrikeev A, Maximkin D, Chepurnoy A, Kallianpur V, Mambetov A, Dokshokov G, Teresinska A, Wozniak O, Maciag A, Wnuk J, Dabrowski A, Czerwiec A, Jezierski J, Biernacka K, Robinson J, Prosser J, Cheung G, Allan S, Mcmaster G, Reid S, Tarbuck A, Martin W, Queiroz RC, Falcao A, Giorgi M, Imada R, Nogueira SA, Chalela WA, Kalil Filho R, Meneghetti WA, Matveev VV, Bubyenov AS, Podzolkov VI, Shugushev Z, Maximkin D, Chepurnoy A, Baranovich V, Faibushevich A, Kolzhecova Y, Volkova O, Kallianpur V, Peix A, Cabrera LO, Padron K, Rodriguez L, Fernandez J, Lopez G, Mena E, Fernandez Y, Dondi M, Paez D, Butcher C, Reyes E, Al-Housni MB, Green R, Santiago H, Ghiotto F, Hinton-Taylor S, Pottle A, Mason M, Underwood SR, Casans Tormo I, Diaz-Exposito R, Plancha-Burguera E, Elsaban K, Alsakhri H, Yoshinaga K, Ochi N, Tomiyama Y, Katoh C, Inoue M, Nishida M, Suzuki E, Manabe O, Ito YM, Tamaki N, Tahilyani A, Jafary F, Ho Hee Hwa HH, Ozdemir S, Kirilmaz B, Barutcu A, Tan YZ, Celik F, Sakgoz S, Cabada Gamboa M, Puente Barragan A, Morales Vitorino N, Medina Servin MA, Hindorf C, Akil S, Hedeer F, Jogi J, Engblom H, Martire VD, Pis Diez ER, Martire MV, Portillo DO, Hoff CM, Balche A, Majgaard J, Tolbod LP, Harms HJ, Bouchelouche K, Soerensen J, Froekiaer J, Gormsen LC, Nudi F, Neri G, Procaccini E, Pinto A, Vetere M, Biondi-Zoccai G, Falcao A, Chalela WA, Giorgi M, Imada R, Soares J Jr, Do Val R, Oliveira MA, Kalil Filho R, Meneghetti JC, Tekabe Y, Anthony T, Li Q, Schmidt AM, Johnson L, Groenman M, Tarkia M, Kakela M, Halonen P, Kiviniemi T, Pietila M, Yla-Herttuala S, Knuuti J, Roivainen A, Saraste A, Nekolla S, Swirzek S, Higuchi T, Reder S, Schachoff S, Bschorner M, Laitinen I, Robinson S, Yousefi B, Schwaiger M, Kero T, Lindsjo L, Antoni G, Westermark P, Carlson K, Wikstrom G, Sorensen J, Lubberink M, Rouzet F, Cognet T, Guedj K, Morvan M, El Shoukr F, Louedec L, Choqueux C, Nicoletti A, Le Guludec D, Jimenez-Heffernan A, Munoz-Beamud F, Sanchez De Mora E, Borrachero C, Salgado C, Ramos-Font C, Lopez-Martin J, Hidalgo ML, Lopez-Aguilar R, Soriano E, Okizaki A, Nakayama M, Ishitoya S, Sato J, Takahashi K, Burchert I, Caobelli F, Wollenweber T, Nierada M, Fulsche J, Dieckmann C, Bengel FM, Shuaib S, Mahlum D, Port S, Gemma D, Refoyo E, Cuesta E, Guzman G, Lopez T, Valbuena S, Fernandez-Velilla M, Del Prado S, Moreno M, Lopez-Sendon JL, Harbinson M, Donnelly L, Einstein AJ, Johnson LL, Deluca AJ, Kontak AC, Groves DW, Stant J, Pozniakoff T, Cheng B, Rabbani LE, Bokhari S, Caobelli F, Schuetze C, Nierada M, Fulsche J, Dieckmann C, Bengel FM, Aguade-Bruix S, Pizzi MN, Romero-Farina G, Terricabras M, Villasboas D, Castell-Conesa J, Candell-Riera J, Brunner S, Gross L, Todica A, Lehner S, Di Palo A, Niccoli Asabella A, Magarelli C, Notaristefano A, Ferrari C, Rubini G, Sellem A, Melki S, Elajmi W, Hammami H, Ziadi MC, Montero J, Ameriso JL, Villavicencio RL, Benito Gonzalez TF, Mayorga Bajo A, Gutierrez Caro R, Rodriguez Santamarta M, Alvarez Roy L, Martinez Paz E, Barinaga Martin C, Martin Fernandez J, Alonso Rodriguez D, Iglesias Garriz I, Gemma D, Refoyo E, Cuesta E, Guzman G, Valbuena S, Rosillo S, Del Prado S, Torres M, Moreno M, Lopez-Sendon JL, Taleb S, Cherkaoui Salhi G, Regbaoui Y, Ait Idir M, Guensi A, Puente A, Rosales S, Martinez C, Cabada M, Benito Gonzalez TF, Mayorga Bajo A, Gutierrez Caro R, Rodriguez Santamarta M, Alvarez Roy L, Martinez Paz E, Martin Lopez CE, Castano Ruiz M, Martin Fernandez J, Iglesias Garriz I.

Eur Heart J Cardiovasc Imaging. 2015 May;16 Suppl 1:i38-i55. doi: 10.1093/ehjci/jev052. No abstract available.

PMID:
25939928
8.

Poster Session 1: Sunday 3 May 2015, 08:30-18:00Room: Poster Area.

Taniguchi Y, Takahashi Y, Toba T, Yamada S, Yokoi K, Kobayashi S, Okajima S, Shimane A, Kawai H, Yasaka Y, Smanio P, Oliveira MA, Machado L, Cestari P, Medeiros E, Fukuzawa S, Okino S, Ikeda A, Maekawa J, Ichikawa S, Kuroiwa N, Yamanaka K, Igarashi A, Inagaki M, Patel K, Mahan M, Ananthasubramaniam K, Mouden M, Yokota S, Ottervanger JP, Knollema S, Timmer JR, Jager PL, Padron K, Peix A, Cabrera LO, Pena Bofill V, Valera D, Rodriguez Nande L, Carrillo Hernandez R, Mena Esnard E, Fernandez Columbie Y, Bertella E, Baggiano A, Mushtaq S, Segurini C, Loguercio M, Conte E, Beltrama V, Petulla' M, Andreini D, Pontone G, Guzic Salobir B, Dolenc Novak M, Jug B, Kacjan B, Novak Z, Vrtovec M, Mushtaq S, Pontone G, Bertella E, Conte E, Segurini C, Volpato V, Baggiano A, Formenti A, Pepi M, Andreini D, Ajanovic R, Husic-Selimovic A, Zujovic-Ajanovic A, Mlynarski R, Mlynarska A, Golba K, Sosnowski M, Ameta D, Goyal M, Kumar D, Chandra S, Sethi R, Puri A, Dwivedi SK, Narain VS, Saran RK, Nekolla S, Rischpler C, Nicolosi S, Langwieser N, Dirschinger R, Laugwitz KL, Schwaiger M, Goral JL, Napoli J, Forcada PJ, Zucchiatti NE, Damico AC, Damico AE, Olivieri DB, Lavorato MA, Dubesarsky EA, Montana OR, Salgado C, Jimenez-Heffernan A, Ramos-Font C, Lopez-Martin J, Sanchez De Mora E, Lopez-Aguilar R, Manovel A, Martinez AB, Rivera F, Soriano E, Maroz-Vadalazhskaya N, Trisvetova E, Vrublevskaya O, Abazid R, Kattea M, Saqqah H, Sayed S, Smettei O, Winther S, Svensson M, Birn H, Jorgensen HS, Botker HE, Ivarsen P, Bottcher M, Maaniitty T, Stenstrom I, Saraste A, Pikkarainen E, Uusitalo V, Ukkonen H, Kajander S, Bax J, Knuuti J, Choi TY, Park HB, Lee CH, Lee JH, Seo YS, Cho YH, Hwang ES, Cho DK, Sanchez Enrique C, Ferrera C, Olmos C, Jimenez-Ballve A, Perez-Castejon MJ, Fernandez C, Vivas D, Vilacosta I, Nagamachi S, Onizuka H, Nishii R, Mizutani Y, Kitamura K, Lo Presti M, Polizzi V, Pino PG, Luzi G, Bellavia D, Fiorilli R, Madeo A, Malouf J, Buffa V, Musumeci F, Rosales S, Puente A, Zafrir N, Shochat T, Mats A, Solodky A, Kornowski R, Lorber A, Boemio A, Pellegrino T, Paolillo S, Piscopo V, Carotenuto R, Russo B, Pellegrino S, De Matteis G, Perrone-Filardi P, Cuocolo A, Piscopo V, Pellegrino T, Boemio A, Carotenuto R, Russo B, Pellegrino S, De Matteis G, Petretta M, Cuocolo A, Amirov N, Ibatullin M, Sadykov A A, Saifullina G, Ruano R, Diego Dominguez M, Rodriguez Gabella T, Diego Nieto A, Diaz Gonzalez LG, Garcia-Talavera JR, Sanchez Fernandez PL, Leen AC, Al Younis I, Zandbergen-Harlaar S, Verberne HJ, Gimelli A, Veltman CE, Wolterbeek R, Bax JJ, Scholte A, Mooney D, Rosenblatt JA, Dunn TL, Vasaiwala SC, Okuda K, Nakajima K, Nystrom K, Edenbrandt L, Matsuo S, Wakabayashi H, Hashimoto M, Kinuya S, Iric-Cupic V, Milanov S, Davidovic G, Zdravkovic V, Ashikaga K, Yoneyama K, Akashi Y, Shugushev Z, Maximkin D, Chepurnoy A, Volkova O, Baranovich V, Faibushevich A, El Tahlawi M, Elmurr A, Alzubaidi S, Sakrana A, Gouda M, El Tahlawi R, Sellem A, Melki S, Elajmi W, Hammami H, Okano M, Kato T, Kimura M, Funasako M, Nakane E, Miyamoto S, Izumi T, Haruna T, Inoko M, Massardo T, Swett E, Fernandez R, Vera V, Zhindon J, Fernandez R, Swett E, Vera V, Zhindon JP, Alay R, Massardo T, Ohshima S, Nishio M, Kojima A, Tamai S, Kobayashi T, Murohara T, Burrell S, Van Rosendael A, Van Den Hoogen I, De Graaf MA, Roelofs J, Kroft LJ, Bax JJ, Scholte AJ, Rjabceva I, Krumina G, Kalvelis A, Chanakhchyan F, Vakhromeeva M, Kankiya E, Koppes J, Knol R, Wondergem M, Van Der Ploeg T, Van Der Zant FM, Lazarenko SV, Bruin VS, Pan XB, Declerck JM, Van Der Zant FM, Knol RJ, Juarez-Orozco LE, Alexanderson E, Slart R, Tio RA, Dierckx RA, Zeebregts CJ, Boersma HH, Hillege HL, Martinez-Aguilar MM, Jordan-Rios A, Christensen TE, Ahtarovski KA, Bang LE, Holmvang L, Soeholm H, Ghotbi AA, Andersson H, Ihlemann N, Kjaer A, Hasbak P, Gulya M, Lishmanov YB, Zavadovskii KW, Lebedev DI, Stahle M, Hellberg S, Liljenback H, Virta J, Metsala O, Yla-Herttuala S, Saukko P, Knuuti J, Saraste A, Roivainen A, Thackeray JT, Wang Y, Bankstahl JP, Wollert KC, Bengel FM, Saushkina YU, Evtushenko V, Minin S, Efimova I, Evtushenko A, Smishlyaev K, Lishmanov YU, Maslov L, Okuda K, Nakajima K, Kirihara Y, Sugino S, Matsuo S, Taki J, Hashimoto M, Kinuya S, Ahmadian A, Berman J, Govender P, Ruberg F, Miller E, Piriou N, Pallardy A, Valette F, Cahouch Z, Mathieu C, Warin-Fresse K, Gueffet JP, Serfaty JM, Trochu JN, Kraeber-Bodere F, Van Dijk JD, Mouden M, Ottervanger JP, Van Dalen JA, Jager PL, Zafrir N, Ofrk H, Vaturi M, Shochat T, Hassid Y, Belzer D, Sagie A, Kornowski R, Kaminek M, Metelkova I, Budikova M, Koranda P, Henzlova L, Sovova E, Kincl V, Drozdova A, Jordan M, Shahid F, Teoh YP, Thamen R, Hara N, Onoguchi M, Hojyo O, Kawaguchi Y, Murai M, Udaka F, Matsuzawa Y, Bulugahapitiya DS, Avison M, Martin J, Liu YH, Wu J, Liu C, Sinusas A, Daou D, Sabbah R, Bouladhour H, Coaguila C, Aguade-Bruix S, Pizzi MN, Romero-Farina G, Candell-Riera J, Castell-Conesa J, Patchett N, Sverdlov A, Miller E, Daou D, Sabbah R, Bouladhour H, Coaguila C, Smettei O, Abazid R, Boulaamayl El Fatemi S, Sallam L, Snipelisky D, Park J, Ray J, Shapiro BS, Kostkiewicz M, Szot W, Holcman K, Lesniak-Sobelga A, Podolec P, Clerc OF, Possner M, Liga R, Vontobel J, Mikulicic F, Graeni C, Benz DC, Herzog BA, Gaemperli O, Kaufmann PA.

Eur Heart J Cardiovasc Imaging. 2015 May;16 Suppl 1:i11-i28. doi: 10.1093/ehjci/jev051. No abstract available.

PMID:
25939923
9.

Disentangling the Complexity of HGF Signaling by Combining Qualitative and Quantitative Modeling.

D'Alessandro LA, Samaga R, Maiwald T, Rho SH, Bonefas S, Raue A, Iwamoto N, Kienast A, Waldow K, Meyer R, Schilling M, Timmer J, Klamt S, Klingmüller U.

PLoS Comput Biol. 2015 Apr 23;11(4):e1004192. doi: 10.1371/journal.pcbi.1004192. eCollection 2015 Apr.

10.

USP18 lack in microglia causes destructive interferonopathy of the mouse brain.

Goldmann T, Zeller N, Raasch J, Kierdorf K, Frenzel K, Ketscher L, Basters A, Staszewski O, Brendecke SM, Spiess A, Tay TL, Kreutz C, Timmer J, Mancini GM, Blank T, Fritz G, Biber K, Lang R, Malo D, Merkler D, Heikenwälder M, Knobeloch KP, Prinz M.

EMBO J. 2015 Jun 12;34(12):1612-29. doi: 10.15252/embj.201490791. Epub 2015 Apr 20.

PMID:
25896511
11.

Assessing parameter identifiability for dynamic causal modeling of fMRI data.

Arand C, Scheller E, Seeber B, Timmer J, Klöppel S, Schelter B.

Front Neurosci. 2015 Feb 20;9:43. doi: 10.3389/fnins.2015.00043. eCollection 2015.

12.

The Interplay Between Host Genetic Variation, Viral Replication, and Microbial Translocation in Untreated HIV-Infected Individuals.

Perkins MR, Bartha I, Timmer JK, Liebner JC, Wollinsky D, Günthard HF, Hauser C, Bernasconi E, Hoffmann M, Calmy A, Battegay M, Telenti A, Douek DC, Fellay J; Swiss HIV Cohort Study.

J Infect Dis. 2015 Aug 15;212(4):578-84. doi: 10.1093/infdis/jiv089. Epub 2015 Feb 20.

PMID:
25701868
13.

Myocardial scar characteristics based on cardiac magnetic resonance imaging is associated with ventricular tachyarrhythmia in patients with ischemic cardiomyopathy.

Demirel F, Adiyaman A, Timmer JR, Dambrink JH, Kok M, Boeve WJ, Elvan A.

Int J Cardiol. 2014 Dec 15;177(2):392-9. doi: 10.1016/j.ijcard.2014.08.132. Epub 2014 Aug 29.

PMID:
25440471
14.

Influence of proton-pump inhibitors on stomach wall uptake of 99mTc-tetrofosmin in cadmium-zinc-telluride SPECT myocardial perfusion imaging.

Mouden M, Rijkee KS, Schreuder N, Timmer JR, Jager PL.

Nucl Med Commun. 2015 Feb;36(2):143-7. doi: 10.1097/MNM.0000000000000222.

PMID:
25356621
15.

Orthogonal optogenetic triple-gene control in Mammalian cells.

Müller K, Engesser R, Timmer J, Zurbriggen MD, Weber W.

ACS Synth Biol. 2014 Nov 21;3(11):796-801. doi: 10.1021/sb500305v. Epub 2014 Oct 28.

PMID:
25343333
16.

The virtual liver: state of the art and future perspectives.

Drasdo D, Bode J, Dahmen U, Dirsch O, Dooley S, Gebhardt R, Ghallab A, Godoy P, Häussinger D, Hammad S, Hoehme S, Holzhütter HG, Klingmüller U, Kuepfer L, Timmer J, Zerial M, Hengstler JG.

Arch Toxicol. 2014 Dec;88(12):2071-5. doi: 10.1007/s00204-014-1384-6. No abstract available.

PMID:
25331938
17.

Assessing the strength of directed influences among neural signals: an approach to noisy data.

Sommerlade L, Thiel M, Mader M, Mader W, Timmer J, Platt B, Schelter B.

J Neurosci Methods. 2015 Jan 15;239:47-64. doi: 10.1016/j.jneumeth.2014.09.007. Epub 2014 Sep 23.

PMID:
25256644
18.

Spatial mapping of dynamic cerebral autoregulation by multichannel near-infrared spectroscopy in high-grade carotid artery disease.

Reinhard M, Schumacher FK, Rutsch S, Oeinck M, Timmer J, Mader I, Schelter B, Weiller C, Kaller CP.

J Biomed Opt. 2014 Sep;19(9):97005. doi: 10.1117/1.JBO.19.9.097005.

PMID:
25253194
19.

The ratio of the lateral correlation length and particle radius determines the density profile of spherical molecules near a fluctuating membrane.

Córdoba-Valdés F, Castañeda-Priego R, Timmer J, Fleck C.

Soft Matter. 2014 Nov 14;10(42):8475-81. doi: 10.1039/c4sm01550a.

PMID:
25238488
20.

In vitro study to simulate the intracardiac magnetohydrodynamic effect.

Buchenberg WB, Mader W, Hoppe G, Lorenz R, Menza M, Büchert M, Timmer J, Jung B.

Magn Reson Med. 2015 Sep;74(3):850-7. doi: 10.1002/mrm.25456. Epub 2014 Sep 15.

PMID:
25224650
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