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Results: 1 to 20 of 96

1.

FlowClus: efficiently filtering and denoising pyrosequenced amplicons.

Gaspar JM, Thomas WK.

BMC Bioinformatics. 2015 Mar 27;16(1):105. doi: 10.1186/s12859-015-0532-1.

2.

Draft Genome Sequence of Photorhabdus temperata Strain Meg1, an Entomopathogenic Bacterium Isolated from Heterorhabditis megidis Nematodes.

Hurst SG 4th, Ghazal S, Morris K, Abebe-Akele F, Thomas WK, Badr UM, Hussein MA, AbouZaied MA, Khalil KM, Tisa LS.

Genome Announc. 2014 Dec 11;2(6). pii: e01273-14. doi: 10.1128/genomeA.01273-14.

3.

An SNP-based second-generation genetic map of Daphnia magna and its application to QTL analysis of phenotypic traits.

Routtu J, Hall MD, Albere B, Beisel C, Bergeron RD, Chaturvedi A, Choi JH, Colbourne J, De Meester L, Stephens MT, Stelzer CP, Solorzano E, Thomas WK, Pfrender ME, Ebert D.

BMC Genomics. 2014 Nov 27;15:1033. doi: 10.1186/1471-2164-15-1033.

4.

Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems.

Lallias D, Hiddink JG, Fonseca VG, Gaspar JM, Sung W, Neill SP, Barnes N, Ferrero T, Hall N, Lambshead PJ, Packer M, Thomas WK, Creer S.

ISME J. 2015 May;9(5):1208-21. doi: 10.1038/ismej.2014.213. Epub 2014 Nov 25.

6.

Nematodes from galls on Myrtaceae. VIII. Fergusobia from small galls on shoot buds, with descriptions of four new species.

Davies KA, Bartholomaeus F, Giblin-Davis RM, Ye W, Taylor GS, Thomas WK.

Zootaxa. 2014 Aug 28;3857:1-40. doi: 10.11646/zootaxa.3857.1.1.

PMID:
25283095
7.

Draft Genome Sequence of Frankia sp. Strain BMG5.23, a Salt-Tolerant Nitrogen-Fixing Actinobacterium Isolated from the Root Nodules of Casuarina glauca Grown in Tunisia.

Ghodhbane-Gtari F, Hurst SG 4th, Oshone R, Morris K, Abebe-Akele F, Thomas WK, Ktari A, Salem K, Gtari M, Tisa LS.

Genome Announc. 2014 May 29;2(3). pii: e00520-14. doi: 10.1128/genomeA.00520-14.

8.

Draft Genome Sequence of Frankia sp. Strain Thr, a Nitrogen-Fixing Actinobacterium Isolated from the Root Nodules of Casuarina cunninghamiana Grown in Egypt.

Hurst SG 4th, Oshone R, Ghodhbane-Gtari F, Morris K, Abebe-Akele F, Thomas WK, Ktari A, Salem K, Mansour S, Gtari M, Tisa LS.

Genome Announc. 2014 May 22;2(3). pii: e00493-14. doi: 10.1128/genomeA.00493-14.

9.

Draft Genome Sequence of Photorhabdus luminescens Strain BA1, an Entomopathogenic Bacterium Isolated from Nematodes Found in Egypt.

Ghazal S, Hurst SG 4th, Morris K, Abebe-Akele F, Thomas WK, Badr UM, Hussein MA, Abouzaied MA, Khalil KM, Tisa LS.

Genome Announc. 2014 May 1;2(2). pii: e00396-14. doi: 10.1128/genomeA.00396-14.

10.

A critique of Rossberg et al.: Noise obscures the genetic signal of meiobiotal ecospecies in ecogenomic datasets.

Morgan MJ, Bass D, Bik H, Birky CW, Blaxter M, Crisp MD, Derycke S, Fitch D, Fontaneto D, Hardy CM, King AJ, Kiontke KC, Moens T, Pawlowski JW, Porazinska D, Tang CQ, Thomas WK, Yeates DK, Creer S.

Proc Biol Sci. 2014 Mar 26;281(1783):20133076. doi: 10.1098/rspb.2013.3076. Print 2014 May 22. No abstract available.

PMID:
24671969
11.

Draft Genome Sequence of Frankia sp. Strain CcI6, a Salt-Tolerant Nitrogen-Fixing Actinobacterium Isolated from the Root Nodule of Casuarina cunninghamiana.

Mansour SR, Oshone R, Hurst SG 4th, Morris K, Thomas WK, Tisa LS.

Genome Announc. 2014 Jan 16;2(1). pii: e01205-13. doi: 10.1128/genomeA.01205-13.

12.

The genome of Romanomermis culicivorax: revealing fundamental changes in the core developmental genetic toolkit in Nematoda.

Schiffer PH, Kroiher M, Kraus C, Koutsovoulos GD, Kumar S, Camps JI, Nsah NA, Stappert D, Morris K, Heger P, Altmüller J, Frommolt P, Nürnberg P, Thomas WK, Blaxter ML, Schierenberg E.

BMC Genomics. 2013 Dec 27;14:923. doi: 10.1186/1471-2164-14-923.

13.

Large-scale detection of in vivo transcription errors.

Gout JF, Thomas WK, Smith Z, Okamoto K, Lynch M.

Proc Natl Acad Sci U S A. 2013 Nov 12;110(46):18584-9. doi: 10.1073/pnas.1309843110. Epub 2013 Oct 28.

14.

Intra-genomic variation in the ribosomal repeats of nematodes.

Bik HM, Fournier D, Sung W, Bergeron RD, Thomas WK.

PLoS One. 2013 Oct 11;8(10):e78230. doi: 10.1371/journal.pone.0078230. eCollection 2013.

15.

Comparison and validation of 2 analytical methods for measurement of urinary sucrose and fructose excretion.

Song X, Navarro SL, Diep P, Thomas WK, Razmpoosh EC, Schwarz Y, Wang CY, Kratz M, Neuhouser ML, Lampe JW.

Nutr Res. 2013 Sep;33(9):696-703. doi: 10.1016/j.nutres.2013.05.017. Epub 2013 Jul 3.

16.

Assessing the consequences of denoising marker-based metagenomic data.

Gaspar JM, Thomas WK.

PLoS One. 2013;8(3):e60458. doi: 10.1371/journal.pone.0060458. Epub 2013 Mar 25.

17.

The nature and frequency of chimeras in eukaryotic metagenetic samples.

Porazinska DL, Giblin-Davis RM, Sung W, Thomas WK.

J Nematol. 2012 Mar;44(1):18-25.

18.

Nematodes from galls on Myrtaceae. IV. Fergusobia from flat leaf galls on Eucalyptus and Corymbia, with descriptions of two new species.

Davies KA, Giblin-Davis RM, Ye W, Taylor GS, Thomas WK.

Zootaxa. 2013 Nov 26;3741:151-71. doi: 10.11646/zootaxa.3741.1.5.

PMID:
25112980
19.

Nematodes from galls on Myrtaceae. V. Fergusobia from large multilocular shoot bud galls from Angophora and Eucalyptus in Australia, with descriptions of six new species.

Davies KA, Giblin-Davis RM, Ye W, Lisnawita L, Taylor GS, Thomas WK.

Zootaxa. 2013 Nov 26;3741:101-40. doi: 10.11646/zootaxa.3741.1.3.

PMID:
25112978
20.

Extraordinary genome stability in the ciliate Paramecium tetraurelia.

Sung W, Tucker AE, Doak TG, Choi E, Thomas WK, Lynch M.

Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19339-44. doi: 10.1073/pnas.1210663109. Epub 2012 Nov 5.

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