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Results: 8

1.

Directed module detection in a large-scale expression compendium.

Fu Q, Lemmens K, Sanchez-Rodriguez A, Thijs IM, Meysman P, Sun H, Fierro AC, Engelen K, Marchal K.

Methods Mol Biol. 2012;804:131-65. doi: 10.1007/978-1-61779-361-5_8.

PMID:
22144152
[PubMed - indexed for MEDLINE]
2.

A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2.

Thiele I, Hyduke DR, Steeb B, Fankam G, Allen DK, Bazzani S, Charusanti P, Chen FC, Fleming RM, Hsiung CA, De Keersmaecker SC, Liao YC, Marchal K, Mo ML, Özdemir E, Raghunathan A, Reed JL, Shin SI, Sigurbjörnsdóttir S, Steinmann J, Sudarsan S, Swainston N, Thijs IM, Zengler K, Palsson BO, Adkins JN, Bumann D.

BMC Syst Biol. 2011 Jan 18;5:8. doi: 10.1186/1752-0509-5-8.

PMID:
21244678
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The AI-2-dependent regulator LsrR has a limited regulon in Salmonella Typhimurium.

Thijs IM, Zhao H, De Weerdt A, Engelen K, De Coster D, Schoofs G, McClelland M, Vanderleyden J, Marchal K, De Keersmaecker SC.

Cell Res. 2010 Aug;20(8):966-9. doi: 10.1038/cr.2010.104. Epub 2010 Jul 13. No abstract available.

PMID:
20628367
[PubMed - indexed for MEDLINE]
4.

Genome-wide detection of predicted non-coding RNAs in Rhizobium etli expressed during free-living and host-associated growth using a high-resolution tiling array.

Vercruysse M, Fauvart M, Cloots L, Engelen K, Thijs IM, Marchal K, Michiels J.

BMC Genomics. 2010 Jan 20;11:53. doi: 10.1186/1471-2164-11-53.

PMID:
20089193
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

DISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli.

Lemmens K, De Bie T, Dhollander T, De Keersmaecker SC, Thijs IM, Schoofs G, De Weerdt A, De Moor B, Vanderleyden J, Collado-Vides J, Engelen K, Marchal K.

Genome Biol. 2009;10(3):R27. doi: 10.1186/gb-2009-10-3-r27. Epub 2009 Mar 6.

PMID:
19265557
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Combining omics data to unravel the regulatory network controlling Salmonella invasion of epithelial cells.

Thijs IM, De Keersmaecker SC, Fadda A, Engelen K, Zhao H, McClelland M, Marchal K, Vanderleyden I.

Commun Agric Appl Biol Sci. 2007;72(1):55-9. No abstract available.

PMID:
18018860
[PubMed - indexed for MEDLINE]
7.

Delineation of the Salmonella enterica serovar Typhimurium HilA regulon through genome-wide location and transcript analysis.

Thijs IM, De Keersmaecker SC, Fadda A, Engelen K, Zhao H, McClelland M, Marchal K, Vanderleyden J.

J Bacteriol. 2007 Jul;189(13):4587-96. Epub 2007 May 4.

PMID:
17483226
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Integration of omics data: how well does it work for bacteria?

De Keersmaecker SC, Thijs IM, Vanderleyden J, Marchal K.

Mol Microbiol. 2006 Dec;62(5):1239-50. Epub 2006 Oct 16. Review.

PMID:
17040488
[PubMed - indexed for MEDLINE]

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