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Results: 1 to 20 of 94

1.

Combined Single-Cell Functional and Gene Expression Analysis Resolves Heterogeneity within Stem Cell Populations.

Wilson NK, Kent DG, Buettner F, Shehata M, Macaulay IC, Calero-Nieto FJ, Sánchez Castillo M, Oedekoven CA, Diamanti E, Schulte R, Ponting CP, Voet T, Caldas C, Stingl J, Green AR, Theis FJ, Göttgens B.

Cell Stem Cell. 2015 May 20. pii: S1934-5909(15)00162-9. doi: 10.1016/j.stem.2015.04.004. [Epub ahead of print]

PMID:
26004780
2.

Diffusion maps for high-dimensional single-cell analysis of differentiation data.

Haghverdi L, Buettner F, Theis FJ.

Bioinformatics. 2015 May 21. pii: btv325. [Epub ahead of print]

PMID:
26002886
3.

Neurodevelopment. Live imaging of adult neural stem cell behavior in the intact and injured zebrafish brain.

Barbosa JS, Sanchez-Gonzalez R, Di Giaimo R, Baumgart EV, Theis FJ, Götz M, Ninkovic J.

Science. 2015 May 15;348(6236):789-93. doi: 10.1126/science.aaa2729.

PMID:
25977550
4.

Next-generation sequencing reveals novel differentially regulated mRNAs, lncRNAs, miRNAs, sdRNAs and a piRNA in pancreatic cancer.

Müller S, Raulefs S, Bruns P, Afonso-Grunz F, Plötner A, Thermann R, Jäger C, Schlitter AM, Kong B, Regel I, Roth WK, Rotter B, Hoffmeier K, Kahl G, Koch I, Theis FJ, Kleeff J, Winter P, Michalski CW.

Mol Cancer. 2015 Apr 25;14(1):94. doi: 10.1186/s12943-015-0358-5.

5.

A critical period for postnatal adaptive plasticity in a model of motor axon miswiring.

Helmbrecht MS, Soellner H, Castiblanco-Urbina MA, Winzeck S, Sundermeier J, Theis FJ, Fouad K, Huber AB.

PLoS One. 2015 Apr 13;10(4):e0123643. doi: 10.1371/journal.pone.0123643. eCollection 2015.

6.

Opposing effects of allogrooming on disease transmission in ant societies.

Theis FJ, Ugelvig LV, Marr C, Cremer S.

Philos Trans R Soc Lond B Biol Sci. 2015 May 26;370(1669). pii: 20140108. doi: 10.1098/rstb.2014.0108.

PMID:
25870394
7.

Multi-omic signature of body weight change: results from a population-based cohort study.

Wahl S, Vogt S, Stückler F, Krumsiek J, Bartel J, Kacprowski T, Schramm K, Carstensen M, Rathmann W, Roden M, Jourdan C, Kangas AJ, Soininen P, Ala-Korpela M, Nöthlings U, Boeing H, Theis FJ, Meisinger C, Waldenberger M, Suhre K, Homuth G, Gieger C, Kastenmüller G, Illig T, Linseisen J, Peters A, Prokisch H, Herder C, Thorand B, Grallert H.

BMC Med. 2015 Mar 9;13:48. doi: 10.1186/s12916-015-0282-y.

8.

Decoding the regulatory network of early blood development from single-cell gene expression measurements.

Moignard V, Woodhouse S, Haghverdi L, Lilly AJ, Tanaka Y, Wilkinson AC, Buettner F, Macaulay IC, Jawaid W, Diamanti E, Nishikawa S, Piterman N, Kouskoff V, Theis FJ, Fisher J, Göttgens B.

Nat Biotechnol. 2015 Mar;33(3):269-76. doi: 10.1038/nbt.3154. Epub 2015 Feb 9.

PMID:
25664528
9.

A subset of metastatic pancreatic ductal adenocarcinomas depends quantitatively on oncogenic Kras/Mek/Erk-induced hyperactive mTOR signalling.

Kong B, Wu W, Cheng T, Schlitter AM, Qian C, Bruns P, Jian Z, Jäger C, Regel I, Raulefs S, Behler N, Irmler M, Beckers J, Friess H, Erkan M, Siveke JT, Tannapfel A, Hahn SA, Theis FJ, Esposito I, Kleeff J, Michalski CW.

Gut. 2015 Jan 19. pii: gutjnl-2014-307616. doi: 10.1136/gutjnl-2014-307616. [Epub ahead of print]

PMID:
25601637
10.

Metabolism gene signatures and surgical site infections in abdominal surgery.

Kong B, Bruns P, Raulefs S, Rieder S, Paul L, Prazeresda Costa O, Buch T, Theis FJ, Michalski CW, Kleeff J.

Int J Surg. 2015 Feb;14:67-74. doi: 10.1016/j.ijsu.2015.01.009. Epub 2015 Jan 16.

PMID:
25599917
11.

Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells.

Buettner F, Natarajan KN, Casale FP, Proserpio V, Scialdone A, Theis FJ, Teichmann SA, Marioni JC, Stegle O.

Nat Biotechnol. 2015 Feb;33(2):155-60. doi: 10.1038/nbt.3102. Epub 2015 Jan 19.

PMID:
25599176
12.

Network-based approach for analyzing intra- and interfluid metabolite associations in human blood, urine, and saliva.

Do KT, Kastenmüller G, Mook-Kanamori DO, Yousri NA, Theis FJ, Suhre K, Krumsiek J.

J Proteome Res. 2015 Feb 6;14(2):1183-94. doi: 10.1021/pr501130a. Epub 2014 Dec 9.

PMID:
25434815
13.

Erratum to: Feature ranking of type 1 diabetes susceptibility genes improves prediction of type 1 diabetes.

Winkler C, Krumsiek J, Buettner F, Angermüller C, Giannopoulou EZ, Theis FJ, Ziegler AG, Bonifacio E.

Diabetologia. 2015 Jan;58(1):206. doi: 10.1007/s00125-014-3435-1. No abstract available.

PMID:
25374276
14.

Bayesian blind source separation for data with network structure.

Illner K, Fuchs C, Theis FJ.

J Comput Biol. 2014 Nov;21(11):855-65. doi: 10.1089/cmb.2014.0117. Epub 2014 Oct 10.

PMID:
25302766
15.

miR-23a-3p causes cellular senescence by targeting hyaluronan synthase 2: possible implication for skin aging.

Röck K, Tigges J, Sass S, Schütze A, Florea AM, Fender AC, Theis FJ, Krutmann J, Boege F, Fritsche E, Reifenberger G, Fischer JW.

J Invest Dermatol. 2015 Feb;135(2):369-77. doi: 10.1038/jid.2014.422. Epub 2014 Sep 29.

PMID:
25264594
16.

RAMONA: a Web application for gene set analysis on multilevel omics data.

Sass S, Buettner F, Mueller NS, Theis FJ.

Bioinformatics. 2015 Jan 1;31(1):128-30. doi: 10.1093/bioinformatics/btu610. Epub 2014 Sep 18.

PMID:
25236464
17.

Feature ranking of type 1 diabetes susceptibility genes improves prediction of type 1 diabetes.

Winkler C, Krumsiek J, Buettner F, Angermüller C, Giannopoulou EZ, Theis FJ, Ziegler AG, Bonifacio E.

Diabetologia. 2014 Dec;57(12):2521-9. doi: 10.1007/s00125-014-3362-1. Epub 2014 Sep 4. Erratum in: Diabetologia. 2015 Jan;58(1):206.

PMID:
25186292
18.

Hypothalamic miR-103 protects from hyperphagic obesity in mice.

Vinnikov IA, Hajdukiewicz K, Reymann J, Beneke J, Czajkowski R, Roth LC, Novak M, Roller A, Dörner N, Starkuviene V, Theis FJ, Erfle H, Schütz G, Grinevich V, Konopka W.

J Neurosci. 2014 Aug 6;34(32):10659-74. doi: 10.1523/JNEUROSCI.4251-13.2014.

19.

Cytokine-regulated GADD45G induces differentiation and lineage selection in hematopoietic stem cells.

Thalheimer FB, Wingert S, De Giacomo P, Haetscher N, Rehage M, Brill B, Theis FJ, Hennighausen L, Schroeder T, Rieger MA.

Stem Cell Reports. 2014 Jun 19;3(1):34-43. doi: 10.1016/j.stemcr.2014.05.010. eCollection 2014 Jul 8.

20.

Allergic contact dermatitis in psoriasis patients: typical, delayed, and non-interacting.

Quaranta M, Eyerich S, Knapp B, Nasorri F, Scarponi C, Mattii M, Garzorz N, Harlfinger AT, Jaeger T, Grosber M, Pennino D, Mempel M, Schnopp C, Theis FJ, Albanesi C, Cavani A, Schmidt-Weber CB, Ring J, Eyerich K.

PLoS One. 2014 Jul 24;9(7):e101814. doi: 10.1371/journal.pone.0101814. eCollection 2014.

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