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Results: 1 to 20 of 76

1.

Cytokine-Regulated GADD45G Induces Differentiation and Lineage Selection in Hematopoietic Stem Cells.

Thalheimer FB, Wingert S, De Giacomo P, Haetscher N, Rehage M, Brill B, Theis FJ, Hennighausen L, Schroeder T, Rieger MA.

Stem Cell Reports. 2014 Jun 19;3(1):34-43. doi: 10.1016/j.stemcr.2014.05.010. eCollection 2014 Jul 8.

PMID:
25068120
[PubMed]
Free PMC Article
2.

Allergic contact dermatitis in psoriasis patients: typical, delayed, and non-interacting.

Quaranta M, Eyerich S, Knapp B, Nasorri F, Scarponi C, Mattii M, Garzorz N, Harlfinger AT, Jaeger T, Grosber M, Pennino D, Mempel M, Schnopp C, Theis FJ, Albanesi C, Cavani A, Schmidt-Weber CB, Ring J, Eyerich K.

PLoS One. 2014 Jul 24;9(7):e101814. doi: 10.1371/journal.pone.0101814. eCollection 2014.

PMID:
25058585
[PubMed - in process]
Free PMC Article
3.

MCA: Multiresolution Correlation Analysis, a graphical tool for subpopulation identification in single-cell gene expression data.

Feigelman J, Theis FJ, Marr C.

BMC Bioinformatics. 2014 Jul 11;15(1):240. doi: 10.1186/1471-2105-15-240.

PMID:
25015590
[PubMed - in process]
Free Article
4.

Intraindividual genome expression analysis reveals a specific molecular signature of psoriasis and eczema.

Quaranta M, Knapp B, Garzorz N, Mattii M, Pullabhatla V, Pennino D, Andres C, Traidl-Hoffmann C, Cavani A, Theis FJ, Ring J, Schmidt-Weber CB, Eyerich S, Eyerich K.

Sci Transl Med. 2014 Jul 9;6(244):244ra90. doi: 10.1126/scitranslmed.3008946.

PMID:
25009230
[PubMed - in process]
5.

ODE Constrained Mixture Modelling: A Method for Unraveling Subpopulation Structures and Dynamics.

Hasenauer J, Hasenauer C, Hucho T, Theis FJ.

PLoS Comput Biol. 2014 Jul 3;10(7):e1003686. doi: 10.1371/journal.pcbi.1003686. eCollection 2014 Jul.

PMID:
24992156
[PubMed - in process]
Free PMC Article
6.

Novel genetic associations with serum level metabolites identified by phenotype set enrichment analyses.

Ried JS, Shin SY, Krumsiek J, Illig T, Theis FJ, Spector TD, Adamski J, Wichmann HE, Strauch K, Soranzo N, Suhre K, Gieger C.

Hum Mol Genet. 2014 Jun 13. pii: ddu301. [Epub ahead of print]

PMID:
24927737
[PubMed - as supplied by publisher]
7.

An atlas of genetic influences on human blood metabolites.

Shin SY, Fauman EB, Petersen AK, Krumsiek J, Santos R, Huang J, Arnold M, Erte I, Forgetta V, Yang TP, Walter K, Menni C, Chen L, Vasquez L, Valdes AM, Hyde CL, Wang V, Ziemek D, Roberts P, Xi L, Grundberg E; Multiple Tissue Human Expression Resource (MuTHER) Consortium, Waldenberger M, Richards JB, Mohney RP, Milburn MV, John SL, Trimmer J, Theis FJ, Overington JP, Suhre K, Brosnan MJ, Gieger C, Kastenmüller G, Spector TD, Soranzo N.

Nat Genet. 2014 Jun;46(6):543-50. doi: 10.1038/ng.2982. Epub 2014 May 11.

PMID:
24816252
[PubMed - in process]
8.

Posttranscriptional regulatory networks: from expression profiling to integrative analysis of mRNA and microRNA data.

Meyer SU, Stoecker K, Sass S, Theis FJ, Pfaffl MW.

Methods Mol Biol. 2014;1160:165-88. doi: 10.1007/978-1-4939-0733-5_15.

PMID:
24740230
[PubMed - in process]
9.

Probabilistic PCA of censored data: accounting for uncertainties in the visualization of high-throughput single-cell qPCR data.

Buettner F, Moignard V, Göttgens B, Theis FJ.

Bioinformatics. 2014 Jul 1;30(13):1867-75. doi: 10.1093/bioinformatics/btu134. Epub 2014 Mar 10.

PMID:
24618470
[PubMed - in process]
Free PMC Article
10.

iVUN: interactive Visualization of Uncertain biochemical reaction Networks.

Vehlow C, Hasenauer J, Kramer A, Raue A, Hug S, Timmer J, Radde N, Theis FJ, Weiskopf D.

BMC Bioinformatics. 2013;14 Suppl 19:S2. doi: 10.1186/1471-2105-14-S19-S2. Epub 2013 Nov 12.

PMID:
24564335
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Metabolite profiling reveals new insights into the regulation of serum urate in humans.

Albrecht E, Waldenberger M, Krumsiek J, Evans AM, Jeratsch U, Breier M, Adamski J, Koenig W, Zeilinger S, Fuchs C, Klopp N, Theis FJ, Wichmann HE, Suhre K, Illig T, Strauch K, Peters A, Gieger C, Kastenmüller G, Doering A, Meisinger C.

Metabolomics. 2014;10:141-151. Epub 2013 Jul 20.

PMID:
24482632
[PubMed]
Free PMC Article
12.

Parameterizing cell-to-cell regulatory heterogeneities via stochastic transcriptional profiles.

Bajikar SS, Fuchs C, Roller A, Theis FJ, Janes KA.

Proc Natl Acad Sci U S A. 2014 Feb 4;111(5):E626-35. doi: 10.1073/pnas.1311647111. Epub 2014 Jan 21.

PMID:
24449900
[PubMed - indexed for MEDLINE]
13.

miR-335 promotes mesendodermal lineage segregation and shapes a transcription factor gradient in the endoderm.

Yang D, Lutter D, Burtscher I, Uetzmann L, Theis FJ, Lickert H.

Development. 2014 Feb;141(3):514-25. doi: 10.1242/dev.104232.

PMID:
24449834
[PubMed - indexed for MEDLINE]
Free Article
14.

Modeling of 2D diffusion processes based on microscopy data: parameter estimation and practical identifiability analysis.

Hock S, Hasenauer J, Theis FJ.

BMC Bioinformatics. 2013;14 Suppl 10:S7. doi: 10.1186/1471-2105-14-S10-S7. Epub 2013 Aug 12.

PMID:
24267545
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A strategy to find gene combinations that identify children who progress rapidly to type 1 diabetes after islet autoantibody seroconversion.

Bonifacio E, Krumsiek J, Winkler C, Theis FJ, Ziegler AG.

Acta Diabetol. 2014 Jun;51(3):403-11. doi: 10.1007/s00592-013-0526-2. Epub 2013 Nov 19.

PMID:
24249616
[PubMed - in process]
16.

Lessons learned from quantitative dynamical modeling in systems biology.

Raue A, Schilling M, Bachmann J, Matteson A, Schelke M, Kaschek D, Hug S, Kreutz C, Harms BD, Theis FJ, Klingmüller U, Timmer J.

PLoS One. 2013 Sep 30;8(9):e74335. doi: 10.1371/journal.pone.0074335. eCollection 2013.

PMID:
24098642
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

An automatic method for robust and fast cell detection in bright field images from high-throughput microscopy.

Buggenthin F, Marr C, Schwarzfischer M, Hoppe PS, Hilsenbeck O, Schroeder T, Theis FJ.

BMC Bioinformatics. 2013 Oct 4;14:297. doi: 10.1186/1471-2105-14-297.

PMID:
24090363
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

A modular framework for gene set analysis integrating multilevel omics data.

Sass S, Buettner F, Mueller NS, Theis FJ.

Nucleic Acids Res. 2013 Nov;41(21):9622-33. doi: 10.1093/nar/gkt752. Epub 2013 Aug 23.

PMID:
23975194
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Method of conditional moments (MCM) for the Chemical Master Equation : A unified framework for the method of moments and hybrid stochastic-deterministic models.

Hasenauer J, Wolf V, Kazeroonian A, Theis FJ.

J Math Biol. 2013 Aug 6. [Epub ahead of print]

PMID:
23918091
[PubMed - as supplied by publisher]
20.

Wound-healing growth factor, basic FGF, induces Erk1/2-dependent mechanical hyperalgesia.

Andres C, Hasenauer J, Ahn HS, Joseph EK, Isensee J, Theis FJ, Allgöwer F, Levine JD, Dib-Hajj SD, Waxman SG, Hucho T.

Pain. 2013 Oct;154(10):2216-26. doi: 10.1016/j.pain.2013.07.005. Epub 2013 Jul 16.

PMID:
23867734
[PubMed - indexed for MEDLINE]

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