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Results: 9

1.

Automatic prediction of polysaccharide utilization loci in Bacteroidetes species.

Terrapon N, Lombard V, Gilbert HJ, Henrissat B.

Bioinformatics. 2015 Mar 1;31(5):647-55. doi: 10.1093/bioinformatics/btu716. Epub 2014 Oct 28.

PMID:
25355788
2.

Identification of divergent protein domains by combining HMM-HMM comparisons and co-occurrence detection.

Ghouila A, Florent I, Guerfali FZ, Terrapon N, Laouini D, Yahia SB, Gascuel O, Bréhélin L.

PLoS One. 2014 Jun 5;9(6):e95275. doi: 10.1371/journal.pone.0095275. eCollection 2014.

3.

Molecular traces of alternative social organization in a termite genome.

Terrapon N, Li C, Robertson HM, Ji L, Meng X, Booth W, Chen Z, Childers CP, Glastad KM, Gokhale K, Gowin J, Gronenberg W, Hermansen RA, Hu H, Hunt BG, Huylmans AK, Khalil SM, Mitchell RD, Munoz-Torres MC, Mustard JA, Pan H, Reese JT, Scharf ME, Sun F, Vogel H, Xiao J, Yang W, Yang Z, Yang Z, Zhou J, Zhu J, Brent CS, Elsik CG, Goodisman MA, Liberles DA, Roe RM, Vargo EL, Vilcinskas A, Wang J, Bornberg-Bauer E, Korb J, Zhang G, Liebig J.

Nat Commun. 2014 May 20;5:3636. doi: 10.1038/ncomms4636.

PMID:
24845553
4.

How do gut microbes break down dietary fiber?

Terrapon N, Henrissat B.

Trends Biochem Sci. 2014 Apr;39(4):156-8. doi: 10.1016/j.tibs.2014.02.005. Epub 2014 Mar 5.

PMID:
24613530
5.

DoMosaics: software for domain arrangement visualization and domain-centric analysis of proteins.

Moore AD, Held A, Terrapon N, Weiner J 3rd, Bornberg-Bauer E.

Bioinformatics. 2014 Jan 15;30(2):282-3. doi: 10.1093/bioinformatics/btt640. Epub 2013 Nov 12.

6.

Rapid similarity search of proteins using alignments of domain arrangements.

Terrapon N, Weiner J, Grath S, Moore AD, Bornberg-Bauer E.

Bioinformatics. 2014 Jan 15;30(2):274-81. doi: 10.1093/bioinformatics/btt379. Epub 2013 Jul 4.

7.

Fitting hidden Markov models of protein domains to a target species: application to Plasmodium falciparum.

Terrapon N, Gascuel O, Maréchal E, Bréhélin L.

BMC Bioinformatics. 2012 May 1;13:67. doi: 10.1186/1471-2105-13-67.

8.

EuPathDomains: the divergent domain database for eukaryotic pathogens.

Ghouila A, Terrapon N, Gascuel O, Guerfali FZ, Laouini D, Maréchal E, Bréhélin L.

Infect Genet Evol. 2011 Jun;11(4):698-707. doi: 10.1016/j.meegid.2010.09.008. Epub 2010 Nov 4.

PMID:
20920608
9.

Detection of new protein domains using co-occurrence: application to Plasmodium falciparum.

Terrapon N, Gascuel O, Maréchal E, Bréehélin L.

Bioinformatics. 2009 Dec 1;25(23):3077-83. doi: 10.1093/bioinformatics/btp560. Epub 2009 Sep 28.

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