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Clinical Sequencing Exploratory Research Consortium: Accelerating Evidence-Based Practice of Genomic Medicine.

Green RC, Goddard KA, Jarvik GP, Amendola LM, Appelbaum PS, Berg JS, Bernhardt BA, Biesecker LG, Biswas S, Blout CL, Bowling KM, Brothers KB, Burke W, Caga-Anan CF, Chinnaiyan AM, Chung WK, Clayton EW, Cooper GM, East K, Evans JP, Fullerton SM, Garraway LA, Garrett JR, Gray SW, Henderson GE, Hindorff LA, Holm IA, Lewis MH, Hutter CM, Janne PA, Joffe S, Kaufman D, Knoppers BM, Koenig BA, Krantz ID, Manolio TA, McCullough L, McEwen J, McGuire A, Muzny D, Myers RM, Nickerson DA, Ou J, Parsons DW, Petersen GM, Plon SE, Rehm HL, Roberts JS, Robinson D, Salama JS, Scollon S, Sharp RR, Shirts B, Spinner NB, Tabor HK, Tarczy-Hornoch P, Veenstra DL, Wagle N, Weck K, Wilfond BS, Wilhelmsen K, Wolf SM, Wynn J, Yu JH; CSER Consortium.

Am J Hum Genet. 2016 May 12. pii: S0002-9297(16)30106-9. doi: 10.1016/j.ajhg.2016.04.011. [Epub ahead of print]


Harnessing next-generation informatics for personalizing medicine: a report from AMIA's 2014 Health Policy Invitational Meeting.

Wiley LK, Tarczy-Hornoch P, Denny JC, Freimuth RR, Overby CL, Shah N, Martin RD, Sarkar IN.

J Am Med Inform Assoc. 2016 Mar;23(2):413-9. doi: 10.1093/jamia/ocv111. Epub 2016 Feb 5.


Physician perspectives of CYP2C19 and clopidogrel drug-gene interaction active clinical decision support alerts.

Nishimura AA, Shirts BH, Salama J, Smith JW, Devine B, Tarczy-Hornoch P.

Int J Med Inform. 2016 Feb;86:117-25. doi: 10.1016/j.ijmedinf.2015.11.004. Epub 2015 Nov 11.


Characterizing Secondary Use of Clinical Data.

Lee ES, Black RA, Harrington RD, Tarczy-Hornoch P, Facmi.

AMIA Jt Summits Transl Sci Proc. 2015 Mar 25;2015:92-6. eCollection 2015.


Pragmatic and Ethical Challenges of Incorporating the Genome into the Electronic Medical Record.

Nishimura AA, Tarczy-Hornoch P, Shirts BH.

Curr Genet Med Rep. 2014 Dec 1;2(4):201-211.


CSER and eMERGE: current and potential state of the display of genetic information in the electronic health record.

Shirts BH, Salama JS, Aronson SJ, Chung WK, Gray SW, Hindorff LA, Jarvik GP, Plon SE, Stoffel EM, Tarczy-Hornoch PZ, Van Allen EM, Weck KE, Chute CG, Freimuth RR, Grundmeier RW, Hartzler AL, Li R, Peissig PL, Peterson JF, Rasmussen LV, Starren JB, Williams MS, Overby CL.

J Am Med Inform Assoc. 2015 Nov;22(6):1231-42. doi: 10.1093/jamia/ocv065. Epub 2015 Jul 3.


Making pharmacogenomic-based prescribing alerts more effective: A scenario-based pilot study with physicians.

Overby CL, Devine EB, Abernethy N, McCune JS, Tarczy-Hornoch P.

J Biomed Inform. 2015 Jun;55:249-59. doi: 10.1016/j.jbi.2015.04.011. Epub 2015 May 7.


Development of clinical decision support alerts for pharmacogenomic incidental findings from exome sequencing.

Nishimura AA, Shirts BH, Dorschner MO, Amendola LM, Smith JW, Jarvik GP, Tarczy-Hornoch P.

Genet Med. 2015 Nov;17(11):939-42. doi: 10.1038/gim.2015.5. Epub 2015 Mar 5.


A nationwide survey of trauma center information technology leverage capacity for mental health comorbidity screening.

Van Eaton EG, Zatzick DF, Gallagher TH, Tarczy-Hornoch P, Rivara FP, Flum DR, Peterson R, Maier RV.

J Am Coll Surg. 2014 Sep;219(3):505-10.e1. doi: 10.1016/j.jamcollsurg.2014.02.032. Epub 2014 Apr 21.


Comparative effectiveness of next generation genomic sequencing for disease diagnosis: design of a randomized controlled trial in patients with colorectal cancer/polyposis syndromes.

Gallego CJ, Bennette CS, Heagerty P, Comstock B, Horike-Pyne M, Hisama F, Amendola LM, Bennett RL, Dorschner MO, Tarczy-Hornoch P, Grady WM, Fullerton SM, Trinidad SB, Regier DA, Nickerson DA, Burke W, Patrick DL, Jarvik GP, Veenstra DL.

Contemp Clin Trials. 2014 Sep;39(1):1-8. doi: 10.1016/j.cct.2014.06.016. Epub 2014 Jul 3.


Usability evaluation of pharmacogenomics clinical decision support aids and clinical knowledge resources in a computerized provider order entry system: a mixed methods approach.

Devine EB, Lee CJ, Overby CL, Abernethy N, McCune J, Smith JW, Tarczy-Hornoch P.

Int J Med Inform. 2014 Jul;83(7):473-83. doi: 10.1016/j.ijmedinf.2014.04.008. Epub 2014 May 9.


Implementation of a "real-world" learning health care system: Washington State's Comparative Effectiveness Research Translation Network (CERTAIN).

Flum DR, Alfonso-Cristancho R, Devine EB, Devlin A, Farrokhi E, Tarczy-Hornoch P, Kessler L, Lavallee D, Patrick DL, Gore JL, Sullivan SD; CERTAIN Collaborative.

Surgery. 2014 May;155(5):860-6. doi: 10.1016/j.surg.2014.01.004.


Refining the structure and content of clinical genomic reports.

Dorschner MO, Amendola LM, Shirts BH, Kiedrowski L, Salama J, Gordon AS, Fullerton SM, Tarczy-Hornoch P, Byers PH, Jarvik GP.

Am J Med Genet C Semin Med Genet. 2014 Mar;166C(1):85-92. doi: 10.1002/ajmg.c.31395. Epub 2014 Mar 10.


A Template for Authoring and Adapting Genomic Medicine Content in the eMERGE Infobutton Project.

Overby CL, Rasmussen LV, Hartzler A, Connolly JJ, Peterson JF, Hedberg RE, Freimuth RR, Shirts BH, Denny JC, Larson EB, Chute CG, Jarvik GP, Ralston JD, Shuldiner AR, Starren J, Kullo IJ, Tarczy-Hornoch P, Williams MS.

AMIA Annu Symp Proc. 2014 Nov 14;2014:944-53. eCollection 2014.


Achieving and sustaining automated health data linkages for learning systems: barriers and solutions.

Van Eaton EG, Devlin AB, Devine EB, Flum DR, Tarczy-Hornoch P.

EGEMS (Wash DC). 2014 Jul 24;2(2):1069. doi: 10.13063/2327-9214.1069. eCollection 2014.


Automating data abstraction in a quality improvement platform for surgical and interventional procedures.

Yetisgen M, Klassen P, Tarczy-Hornoch P.

EGEMS (Wash DC). 2014 Nov 26;2(1):1114. doi: 10.13063/2327-9214.1114. eCollection 2014.


Availability of structured and unstructured clinical data for comparative effectiveness research and quality improvement: a multisite assessment.

Capurro D, PhD MY, van Eaton E, Black R, Tarczy-Hornoch P.

EGEMS (Wash DC). 2014 Jul 11;2(1):1079. doi: 10.13063/2327-9214.1079. eCollection 2014.


Biotrust: a comprehensive system for acquiring and distributing biospecimens.

Anderson N, Ponko S, Black T, Prosser J, Stein B, Tarczy-Hornoch P, Porter P.

AMIA Jt Summits Transl Sci Proc. 2013 Mar 18;2013:4. eCollection 2013.


A survey of informatics approaches to whole-exome and whole-genome clinical reporting in the electronic health record.

Tarczy-Hornoch P, Amendola L, Aronson SJ, Garraway L, Gray S, Grundmeier RW, Hindorff LA, Jarvik G, Karavite D, Lebo M, Plon SE, Van Allen E, Weck KE, White PS, Yang Y.

Genet Med. 2013 Oct;15(10):824-32. doi: 10.1038/gim.2013.120. Epub 2013 Sep 26.


Opportunities for genomic clinical decision support interventions.

Overby CL, Kohane I, Kannry JL, Williams MS, Starren J, Bottinger E, Gottesman O, Denny JC, Weng C, Tarczy-Hornoch P, Hripcsak G.

Genet Med. 2013 Oct;15(10):817-23. doi: 10.1038/gim.2013.128. Epub 2013 Sep 19. No abstract available.

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