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2005 1
2008 1
2009 1
2010 6
2011 2
2012 1
2024 0

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Page 1
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome".
Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, Ward NL, Angiuoli SV, Crabtree J, Jones AL, Durkin AS, Deboy RT, Davidsen TM, Mora M, Scarselli M, Margarit y Ros I, Peterson JD, Hauser CR, Sundaram JP, Nelson WC, Madupu R, Brinkac LM, Dodson RJ, Rosovitz MJ, Sullivan SA, Daugherty SC, Haft DH, Selengut J, Gwinn ML, Zhou L, Zafar N, Khouri H, Radune D, Dimitrov G, Watkins K, O'Connor KJ, Smith S, Utterback TR, White O, Rubens CE, Grandi G, Madoff LC, Kasper DL, Telford JL, Wessels MR, Rappuoli R, Fraser CM. Tettelin H, et al. Among authors: sundaram jp. Proc Natl Acad Sci U S A. 2005 Sep 27;102(39):13950-5. doi: 10.1073/pnas.0506758102. Epub 2005 Sep 19. Proc Natl Acad Sci U S A. 2005. PMID: 16172379 Free PMC article.
VIGOR, an annotation program for small viral genomes.
Wang S, Sundaram JP, Spiro D. Wang S, et al. Among authors: sundaram jp. BMC Bioinformatics. 2010 Sep 7;11:451. doi: 10.1186/1471-2105-11-451. BMC Bioinformatics. 2010. PMID: 20822531 Free PMC article.
Pathema: a clade-specific bioinformatics resource center for pathogen research.
Brinkac LM, Davidsen T, Beck E, Ganapathy A, Caler E, Dodson RJ, Durkin AS, Harkins DM, Lorenzi H, Madupu R, Sebastian Y, Shrivastava S, Thiagarajan M, Orvis J, Sundaram JP, Crabtree J, Galens K, Zhao Y, Inman JM, Montgomery R, Schobel S, Galinsky K, Tanenbaum DM, Resnick A, Zafar N, White O, Sutton G. Brinkac LM, et al. Among authors: sundaram jp. Nucleic Acids Res. 2010 Jan;38(Database issue):D408-14. doi: 10.1093/nar/gkp850. Epub 2009 Oct 20. Nucleic Acids Res. 2010. PMID: 19843611 Free PMC article.
Bovine Genome Database: integrated tools for genome annotation and discovery.
Childers CP, Reese JT, Sundaram JP, Vile DC, Dickens CM, Childs KL, Salih H, Bennett AK, Hagen DE, Adelson DL, Elsik CG. Childers CP, et al. Among authors: sundaram jp. Nucleic Acids Res. 2011 Jan;39(Database issue):D830-4. doi: 10.1093/nar/gkq1235. Epub 2010 Dec 1. Nucleic Acids Res. 2011. PMID: 21123190 Free PMC article.
Ergatis: a web interface and scalable software system for bioinformatics workflows.
Orvis J, Crabtree J, Galens K, Gussman A, Inman JM, Lee E, Nampally S, Riley D, Sundaram JP, Felix V, Whitty B, Mahurkar A, Wortman J, White O, Angiuoli SV. Orvis J, et al. Among authors: sundaram jp. Bioinformatics. 2010 Jun 15;26(12):1488-92. doi: 10.1093/bioinformatics/btq167. Epub 2010 Apr 22. Bioinformatics. 2010. PMID: 20413634 Free PMC article.
Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus.
Fedorova ND, Khaldi N, Joardar VS, Maiti R, Amedeo P, Anderson MJ, Crabtree J, Silva JC, Badger JH, Albarraq A, Angiuoli S, Bussey H, Bowyer P, Cotty PJ, Dyer PS, Egan A, Galens K, Fraser-Liggett CM, Haas BJ, Inman JM, Kent R, Lemieux S, Malavazi I, Orvis J, Roemer T, Ronning CM, Sundaram JP, Sutton G, Turner G, Venter JC, White OR, Whitty BR, Youngman P, Wolfe KH, Goldman GH, Wortman JR, Jiang B, Denning DW, Nierman WC. Fedorova ND, et al. Among authors: sundaram jp. PLoS Genet. 2008 Apr 11;4(4):e1000046. doi: 10.1371/journal.pgen.1000046. PLoS Genet. 2008. PMID: 18404212 Free PMC article.