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Results: 1 to 20 of 66

1.

Ciliates and the rare biosphere: a review.

Dunthorn M, Stoeck T, Clamp J, Warren A, Mahé F.

J Eukaryot Microbiol. 2014 Jul;61(4):404-9. doi: 10.1111/jeu.12121. Epub 2014 Jun 2.

PMID:
24801645
[PubMed - in process]
2.

Patterns of rare and abundant marine microbial eukaryotes.

Logares R, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Gobet A, Kooistra WH, Mahé F, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Stoeck T, Santini S, Siano R, Wincker P, Zingone A, Richards TA, de Vargas C, Massana R.

Curr Biol. 2014 Apr 14;24(8):813-21. doi: 10.1016/j.cub.2014.02.050. Epub 2014 Apr 3.

PMID:
24704080
[PubMed - in process]
3.

"Candidatus Haloectosymbiotes riaformosensis" (Halobacteriaceae), an archaeal ectosymbiont of the hypersaline ciliate Platynematum salinarum.

Filker S, Kaiser M, Rosselló-Móra R, Dunthorn M, Lax G, Stoeck T.

Syst Appl Microbiol. 2014 Jun;37(4):244-51. doi: 10.1016/j.syapm.2014.01.001. Epub 2014 Mar 12.

PMID:
24629416
[PubMed - in process]
4.

Tritirachium candoliense sp. nov., a novel basidiomycetous fungus isolated from the anoxic zone of the Arabian Sea.

Manohar CS, Boekhout T, Müller WH, Stoeck T.

Fungal Biol. 2014 Feb;118(2):139-49. doi: 10.1016/j.funbio.2013.10.010. Epub 2013 Nov 21.

PMID:
24528637
[PubMed - in process]
5.

The chaos prevails: molecular phylogeny of the Haptoria (Ciliophora, Litostomatea).

Vďačný P, Breiner HW, Yashchenko V, Dunthorn M, Stoeck T, Foissner W.

Protist. 2014 Jan;165(1):93-111. doi: 10.1016/j.protis.2013.11.001. Epub 2013 Dec 1.

PMID:
24524973
[PubMed - in process]
6.

Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea.

Stief P, Fuchs-Ocklenburg S, Kamp A, Manohar CS, Houbraken J, Boekhout T, de Beer D, Stoeck T.

BMC Microbiol. 2014 Feb 11;14:35. doi: 10.1186/1471-2180-14-35.

PMID:
24517718
[PubMed - in process]
Free PMC Article
7.

Morphology and ontogenesis of Psilotrichides hawaiiensis nov. gen., nov. spec. and molecular phylogeny of the Psilotrichidae (Ciliophora, Hypotrichia).

Heber D, Stoeck T, Foissner W.

J Eukaryot Microbiol. 2014 May-Jun;61(3):260-77. doi: 10.1111/jeu.12104.

PMID:
24498929
[PubMed - in process]
8.

Placing environmental next-generation sequencing amplicons from microbial eukaryotes into a phylogenetic context.

Dunthorn M, Otto J, Berger SA, Stamatakis A, Mahé F, Romac S, de Vargas C, Audic S; Biomarks Consortium, Stock A, Kauff F, Stoeck T.

Mol Biol Evol. 2014 Apr;31(4):993-1009. doi: 10.1093/molbev/msu055. Epub 2014 Jan 27.

PMID:
24473288
[PubMed - in process]
9.

Morphology, ontogenesis and molecular phylogeny of Platynematum salinarum nov. spec., a new scuticociliate (Ciliophora, Scuticociliatia) from a solar saltern.

Foissner W, Jung JH, Filker S, Rudolph J, Stoeck T.

Eur J Protistol. 2014 Apr;50(2):174-84. doi: 10.1016/j.ejop.2013.10.001. Epub 2013 Oct 11.

PMID:
24370338
[PubMed - in process]
10.

Identification of the pathogenic ciliate Pseudocohnilembus persalinus (Oligohymenophorea: Scuticociliatia) by fluorescence in situ hybridization.

Zhan Z, Stoeck T, Dunthorn M, Xu K.

Eur J Protistol. 2014 Feb;50(1):16-24. doi: 10.1016/j.ejop.2013.09.004. Epub 2013 Oct 22.

PMID:
24287159
[PubMed - indexed for MEDLINE]
11.

Protistan grazing in a meromictic freshwater lake with anoxic bottom water.

Oikonomou A, Pachiadaki M, Stoeck T.

FEMS Microbiol Ecol. 2014 Mar;87(3):691-703. doi: 10.1111/1574-6941.12257. Epub 2013 Dec 5.

PMID:
24256471
[PubMed - indexed for MEDLINE]
12.

New SSU-rDNA sequences for eleven colpodeans (Ciliophora, Colpodea) and description of Apocyrtolophosis nov. gen.

Foissner W, Bourland WA, Wolf KW, Stoeck T, Dunthorn M.

Eur J Protistol. 2014 Feb;50(1):40-6. doi: 10.1016/j.ejop.2013.09.003. Epub 2013 Oct 6.

PMID:
24210999
[PubMed - indexed for MEDLINE]
13.

The D1-D2 region of the large subunit ribosomal DNA as barcode for ciliates.

Stoeck T, Przybos E, Dunthorn M.

Mol Ecol Resour. 2014 May;14(3):458-68. doi: 10.1111/1755-0998.12195. Epub 2013 Nov 29.

PMID:
24165195
[PubMed - in process]
14.

Schmidingerothrix salinarum nov. spec. is the molecular sister of the large oxytrichid clade (ciliophora, hypotricha).

Foissner W, Filker S, Stoeck T.

J Eukaryot Microbiol. 2014 Jan-Feb;61(1):61-74. doi: 10.1111/jeu.12087. Epub 2013 Dec 10.

PMID:
24147743
[PubMed - in process]
15.

A morphogenetic survey on ciliate plankton from a mountain lake pinpoints the necessity of lineage-specific barcode markers in microbial ecology.

Stoeck T, Breiner HW, Filker S, Ostermaier V, Kammerlander B, Sonntag B.

Environ Microbiol. 2014 Feb;16(2):430-44. doi: 10.1111/1462-2920.12194. Epub 2013 Jul 15.

PMID:
23848238
[PubMed - indexed for MEDLINE]
Free Article
16.

Evidence for isolated evolution of deep-sea ciliate communities through geological separation and environmental selection.

Stock A, Edgcomb V, Orsi W, Filker S, Breiner HW, Yakimov MM, Stoeck T.

BMC Microbiol. 2013 Jul 8;13:150. doi: 10.1186/1471-2180-13-150.

PMID:
23834625
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Morphology of Bromeliophrya quadristicha n. spec., an inhabitant of tank bromeliads (Bromeliaceae), and phylogeny of the Bromeliophryidae (Ciliophora, Tetrahymenida).

Foissner W, Stoeck T.

J Eukaryot Microbiol. 2013 May-Jun;60(3):223-34. doi: 10.1111/jeu.12020. Epub 2013 Jan 24.

PMID:
23346872
[PubMed - indexed for MEDLINE]
18.

Environmental selection of protistan plankton communities in hypersaline anoxic deep-sea basins, Eastern Mediterranean Sea.

Filker S, Stock A, Breiner HW, Edgcomb V, Orsi W, Yakimov MM, Stoeck T.

Microbiologyopen. 2013 Feb;2(1):54-63. doi: 10.1002/mbo3.56. Epub 2012 Dec 13.

PMID:
23239531
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy.

Guillou L, Bachar D, Audic S, Bass D, Berney C, Bittner L, Boutte C, Burgaud G, de Vargas C, Decelle J, Del Campo J, Dolan JR, Dunthorn M, Edvardsen B, Holzmann M, Kooistra WH, Lara E, Le Bescot N, Logares R, Mahé F, Massana R, Montresor M, Morard R, Not F, Pawlowski J, Probert I, Sauvadet AL, Siano R, Stoeck T, Vaulot D, Zimmermann P, Christen R.

Nucleic Acids Res. 2013 Jan;41(Database issue):D597-604. doi: 10.1093/nar/gks1160. Epub 2012 Nov 27.

PMID:
23193267
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms.

Pawlowski J, Audic S, Adl S, Bass D, Belbahri L, Berney C, Bowser SS, Cepicka I, Decelle J, Dunthorn M, Fiore-Donno AM, Gile GH, Holzmann M, Jahn R, Jirků M, Keeling PJ, Kostka M, Kudryavtsev A, Lara E, Lukeš J, Mann DG, Mitchell EA, Nitsche F, Romeralo M, Saunders GW, Simpson AG, Smirnov AV, Spouge JL, Stern RF, Stoeck T, Zimmermann J, Schindel D, de Vargas C.

PLoS Biol. 2012;10(11):e1001419. doi: 10.1371/journal.pbio.1001419. Epub 2012 Nov 6. No abstract available.

PMID:
23139639
[PubMed - indexed for MEDLINE]
Free PMC Article

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