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Results: 1 to 20 of 71

1.

High diversity of protistan plankton communities in remote high mountain lakes in the European Alps and the Himalayan mountains.

Kammerlander B, Breiner HW, Filker S, Sommaruga R, Sonntag B, Stoeck T.

FEMS Microbiol Ecol. 2015 Apr;91(4). pii: fiv010. doi: 10.1093/femsec/fiv010. Epub 2015 Jan 27.

PMID:
25764458
2.

Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms.

Forster D, Bittner L, Karkar S, Dunthorn M, Romac S, Audic S, Lopez P, Stoeck T, Bapteste E.

BMC Biol. 2015 Feb 24;13(1):16. [Epub ahead of print]

3.

Deep sequencing uncovers protistan plankton diversity in the Portuguese Ria Formosa solar saltern ponds.

Filker S, Gimmler A, Dunthorn M, Mahé F, Stoeck T.

Extremophiles. 2015 Mar;19(2):283-95. doi: 10.1007/s00792-014-0713-2. Epub 2014 Dec 4.

PMID:
25472012
4.

Protistan diversity in a permanently stratified meromictic lake (Lake Alatsee, SW Germany).

Oikonomou A, Filker S, Breiner HW, Stoeck T.

Environ Microbiol. 2014 Oct 20. doi: 10.1111/1462-2920.12666. [Epub ahead of print]

PMID:
25330396
5.

Comparing High-throughput Platforms for Sequencing the V4 Region of SSU-rDNA in Environmental Microbial Eukaryotic Diversity Surveys.

Mahé F, Mayor J, Bunge J, Chi J, Siemensmeyer T, Stoeck T, Wahl B, Paprotka T, Filker S, Dunthorn M.

J Eukaryot Microbiol. 2014 Oct 14. doi: 10.1111/jeu.12187. [Epub ahead of print]

PMID:
25312509
6.

Ciliates and the rare biosphere: a review.

Dunthorn M, Stoeck T, Clamp J, Warren A, Mahé F.

J Eukaryot Microbiol. 2014 Jul-Aug;61(4):404-9. doi: 10.1111/jeu.12121. Epub 2014 Jun 2. Review.

PMID:
24801645
7.

Patterns of rare and abundant marine microbial eukaryotes.

Logares R, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Gobet A, Kooistra WH, Mahé F, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Stoeck T, Santini S, Siano R, Wincker P, Zingone A, Richards TA, de Vargas C, Massana R.

Curr Biol. 2014 Apr 14;24(8):813-21. doi: 10.1016/j.cub.2014.02.050. Epub 2014 Apr 3.

PMID:
24704080
8.

"Candidatus Haloectosymbiotes riaformosensis" (Halobacteriaceae), an archaeal ectosymbiont of the hypersaline ciliate Platynematum salinarum.

Filker S, Kaiser M, Rosselló-Móra R, Dunthorn M, Lax G, Stoeck T.

Syst Appl Microbiol. 2014 Jun;37(4):244-51. doi: 10.1016/j.syapm.2014.01.001. Epub 2014 Mar 12.

PMID:
24629416
9.

Tritirachium candoliense sp. nov., a novel basidiomycetous fungus isolated from the anoxic zone of the Arabian Sea.

Manohar CS, Boekhout T, Müller WH, Stoeck T.

Fungal Biol. 2014 Feb;118(2):139-49. doi: 10.1016/j.funbio.2013.10.010. Epub 2013 Nov 21.

PMID:
24528637
10.

The chaos prevails: molecular phylogeny of the Haptoria (Ciliophora, Litostomatea).

Vďačný P, Breiner HW, Yashchenko V, Dunthorn M, Stoeck T, Foissner W.

Protist. 2014 Jan;165(1):93-111. doi: 10.1016/j.protis.2013.11.001. Epub 2013 Dec 1.

PMID:
24524973
11.

Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea.

Stief P, Fuchs-Ocklenburg S, Kamp A, Manohar CS, Houbraken J, Boekhout T, de Beer D, Stoeck T.

BMC Microbiol. 2014 Feb 11;14:35. doi: 10.1186/1471-2180-14-35.

12.
13.

Placing environmental next-generation sequencing amplicons from microbial eukaryotes into a phylogenetic context.

Dunthorn M, Otto J, Berger SA, Stamatakis A, Mahé F, Romac S, de Vargas C, Audic S; Biomarks Consortium, Stock A, Kauff F, Stoeck T.

Mol Biol Evol. 2014 Apr;31(4):993-1009. doi: 10.1093/molbev/msu055. Epub 2014 Jan 27.

14.

Morphology, ontogenesis and molecular phylogeny of Platynematum salinarum nov. spec., a new scuticociliate (Ciliophora, Scuticociliatia) from a solar saltern.

Foissner W, Jung JH, Filker S, Rudolph J, Stoeck T.

Eur J Protistol. 2014 Apr;50(2):174-84. doi: 10.1016/j.ejop.2013.10.001. Epub 2013 Oct 11.

PMID:
24370338
15.

Identification of the pathogenic ciliate Pseudocohnilembus persalinus (Oligohymenophorea: Scuticociliatia) by fluorescence in situ hybridization.

Zhan Z, Stoeck T, Dunthorn M, Xu K.

Eur J Protistol. 2014 Feb;50(1):16-24. doi: 10.1016/j.ejop.2013.09.004. Epub 2013 Oct 22.

PMID:
24287159
16.

Protistan grazing in a meromictic freshwater lake with anoxic bottom water.

Oikonomou A, Pachiadaki M, Stoeck T.

FEMS Microbiol Ecol. 2014 Mar;87(3):691-703. doi: 10.1111/1574-6941.12257. Epub 2013 Dec 5.

17.

New SSU-rDNA sequences for eleven colpodeans (Ciliophora, Colpodea) and description of Apocyrtolophosis nov. gen.

Foissner W, Bourland WA, Wolf KW, Stoeck T, Dunthorn M.

Eur J Protistol. 2014 Feb;50(1):40-6. doi: 10.1016/j.ejop.2013.09.003. Epub 2013 Oct 6.

PMID:
24210999
18.

The D1-D2 region of the large subunit ribosomal DNA as barcode for ciliates.

Stoeck T, Przybos E, Dunthorn M.

Mol Ecol Resour. 2014 May;14(3):458-68. doi: 10.1111/1755-0998.12195. Epub 2013 Nov 29.

PMID:
24165195
19.

Schmidingerothrix salinarum nov. spec. is the molecular sister of the large oxytrichid clade (ciliophora, hypotricha).

Foissner W, Filker S, Stoeck T.

J Eukaryot Microbiol. 2014 Jan-Feb;61(1):61-74. doi: 10.1111/jeu.12087. Epub 2013 Dec 10.

PMID:
24147743
20.

A morphogenetic survey on ciliate plankton from a mountain lake pinpoints the necessity of lineage-specific barcode markers in microbial ecology.

Stoeck T, Breiner HW, Filker S, Ostermaier V, Kammerlander B, Sonntag B.

Environ Microbiol. 2014 Feb;16(2):430-44. doi: 10.1111/1462-2920.12194. Epub 2013 Jul 15.

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