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Results: 1 to 20 of 22

1.

ENViz: a Cytoscape App for integrated statistical analysis and visualization of sample-matched data with multiple data types.

Steinfeld I, Navon R, Creech ML, Yakhini Z, Tsalenko A.

Bioinformatics. 2015 May 15;31(10):1683-5. doi: 10.1093/bioinformatics/btu853. Epub 2015 Jan 9.

2.

Specific genomic and transcriptomic aberrations in tumors induced by partial hepatectomy of a chronically inflamed murine liver.

Ella E, Heim D, Stoyanov E, Harari-Steinfeld R, Steinfeld I, Pappo O, Perlman TS, Nachmansson N, Rivkin L, Olam D, Abramovitch R, Wege H, Galun E, Goldenberg D.

Oncotarget. 2014 Nov 15;5(21):10318-31.

3.

Association of N-glycosylation with breast carcinoma and systemic features using high-resolution quantitative UPLC.

Saldova R, Asadi Shehni A, Haakensen VD, Steinfeld I, Hilliard M, Kifer I, Helland A, Yakhini Z, Børresen-Dale AL, Rudd PM.

J Proteome Res. 2014 May 2;13(5):2314-27. doi: 10.1021/pr401092y. Epub 2014 Apr 11.

PMID:
24669823
4.

Molecular rules governing de novo methylation in cancer.

Nejman D, Straussman R, Steinfeld I, Ruvolo M, Roberts D, Yakhini Z, Cedar H.

Cancer Res. 2014 Mar 1;74(5):1475-83. doi: 10.1158/0008-5472.CAN-13-3042. Epub 2014 Jan 22.

5.

RPE specification in the chick is mediated by surface ectoderm-derived BMP and Wnt signalling.

Steinfeld J, Steinfeld I, Coronato N, Hampel ML, Layer PG, Araki M, Vogel-Höpker A.

Development. 2013 Dec;140(24):4959-69. doi: 10.1242/dev.096990. Epub 2013 Nov 13.

6.

Deregulation of cancer-related miRNAs is a common event in both benign and malignant human breast tumors.

Tahiri A, Leivonen SK, Lüders T, Steinfeld I, Ragle Aure M, Geisler J, Mäkelä R, Nord S, Riis ML, Yakhini Z, Kleivi Sahlberg K, Børresen-Dale AL, Perälä M, Bukholm IR, Kristensen VN.

Carcinogenesis. 2014 Jan;35(1):76-85. doi: 10.1093/carcin/bgt333. Epub 2013 Oct 8.

7.

Identifying in-trans process associated genes in breast cancer by integrated analysis of copy number and expression data.

Aure MR, Steinfeld I, Baumbusch LO, Liestøl K, Lipson D, Nyberg S, Naume B, Sahlberg KK, Kristensen VN, Børresen-Dale AL, Lingjærde OC, Yakhini Z.

PLoS One. 2013;8(1):e53014. doi: 10.1371/journal.pone.0053014. Epub 2013 Jan 30.

8.

miRNA target enrichment analysis reveals directly active miRNAs in health and disease.

Steinfeld I, Navon R, Ach R, Yakhini Z.

Nucleic Acids Res. 2013 Feb 1;41(3):e45. doi: 10.1093/nar/gks1142. Epub 2012 Dec 2.

9.

Global methylation patterns in idiopathic pulmonary fibrosis.

Rabinovich EI, Kapetanaki MG, Steinfeld I, Gibson KF, Pandit KV, Yu G, Yakhini Z, Kaminski N.

PLoS One. 2012;7(4):e33770. doi: 10.1371/journal.pone.0033770. Epub 2012 Apr 10.

10.

miRNA-mRNA integrated analysis reveals roles for miRNAs in primary breast tumors.

Enerly E, Steinfeld I, Kleivi K, Leivonen SK, Aure MR, Russnes HG, Rønneberg JA, Johnsen H, Navon R, Rødland E, Mäkelä R, Naume B, Perälä M, Kallioniemi O, Kristensen VN, Yakhini Z, Børresen-Dale AL.

PLoS One. 2011 Feb 22;6(2):e16915. doi: 10.1371/journal.pone.0016915.

11.

Bridging the physician and CAM practitioner communication gap: suggested framework for communication between physicians and CAM practitioners based on a cross professional survey from Israel.

Schiff E, Frenkel M, Shilo M, Levy M, Schachter L, Freifeld Y, Steinfeld I, Maizes V, Ben-Arye E.

Patient Educ Couns. 2011 Nov;85(2):188-93. doi: 10.1016/j.pec.2010.08.029. Epub 2010 Nov 1.

PMID:
21041056
12.

EGF decreases the abundance of microRNAs that restrain oncogenic transcription factors.

Avraham R, Sas-Chen A, Manor O, Steinfeld I, Shalgi R, Tarcic G, Bossel N, Zeisel A, Amit I, Zwang Y, Enerly E, Russnes HG, Biagioni F, Mottolese M, Strano S, Blandino G, Børresen-Dale AL, Pilpel Y, Yakhini Z, Segal E, Yarden Y.

Sci Signal. 2010 Jun 1;3(124):ra43. doi: 10.1126/scisignal.2000876.

13.

Novel rank-based statistical methods reveal microRNAs with differential expression in multiple cancer types.

Navon R, Wang H, Steinfeld I, Tsalenko A, Ben-Dor A, Yakhini Z.

PLoS One. 2009 Nov 25;4(11):e8003. doi: 10.1371/journal.pone.0008003.

14.

Developmental programming of CpG island methylation profiles in the human genome.

Straussman R, Nejman D, Roberts D, Steinfeld I, Blum B, Benvenisty N, Simon I, Yakhini Z, Cedar H.

Nat Struct Mol Biol. 2009 May;16(5):564-71. doi: 10.1038/nsmb.1594. Epub 2009 Apr 19.

PMID:
19377480
15.

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists.

Eden E, Navon R, Steinfeld I, Lipson D, Yakhini Z.

BMC Bioinformatics. 2009 Feb 3;10:48. doi: 10.1186/1471-2105-10-48.

16.

Small deletion variants have stable breakpoints commonly associated with alu elements.

de Smith AJ, Walters RG, Coin LJ, Steinfeld I, Yakhini Z, Sladek R, Froguel P, Blakemore AI.

PLoS One. 2008 Aug 29;3(8):e3104. doi: 10.1371/journal.pone.0003104.

17.

Clinically driven semi-supervised class discovery in gene expression data.

Steinfeld I, Navon R, Ardigò D, Zavaroni I, Yakhini Z.

Bioinformatics. 2008 Aug 15;24(16):i90-7. doi: 10.1093/bioinformatics/btn279.

18.

The fine-scale and complex architecture of human copy-number variation.

Perry GH, Ben-Dor A, Tsalenko A, Sampas N, Rodriguez-Revenga L, Tran CW, Scheffer A, Steinfeld I, Tsang P, Yamada NA, Park HS, Kim JI, Seo JS, Yakhini Z, Laderman S, Bruhn L, Lee C.

Am J Hum Genet. 2008 Mar;82(3):685-95. doi: 10.1016/j.ajhg.2007.12.010. Epub 2008 Jan 24.

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