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Results: 1 to 20 of 74

1.

Revisiting N2 fixation in Guerrero Negro intertidal microbial mats with a functional single-cell approach.

Woebken D, Burow LC, Behnam F, Mayali X, Schintlmeister A, Fleming ED, Prufert-Bebout L, Singer SW, Cortés AL, Hoehler TM, Pett-Ridge J, Spormann AM, Wagner M, Weber PK, Bebout BM.

ISME J. 2014 Oct 10. doi: 10.1038/ismej.2014.144. [Epub ahead of print]

PMID:
25303712
[PubMed - as supplied by publisher]
2.

Bacteria from diverse habitats colonize and compete in the mouse gut.

Seedorf H, Griffin NW, Ridaura VK, Reyes A, Cheng J, Rey FE, Smith MI, Simon GM, Scheffrahn RH, Woebken D, Spormann AM, Van Treuren W, Ursell LK, Pirrung M, Robbins-Pianka A, Cantarel BL, Lombard V, Henrissat B, Knight R, Gordon JI.

Cell. 2014 Oct 9;159(2):253-66. doi: 10.1016/j.cell.2014.09.008. Epub 2014 Oct 2.

PMID:
25284151
[PubMed - in process]
3.

Nanoliter qPCR platform for highly parallel, quantitative assessment of reductive dehalogenase genes and populations of dehalogenating microorganisms in complex environments.

Mayer-Blackwell K, Azizian MF, Machak C, Vitale E, Carpani G, de Ferra F, Semprini L, Spormann AM.

Environ Sci Technol. 2014 Aug 19;48(16):9659-67. doi: 10.1021/es500918w. Epub 2014 Jul 21.

PMID:
25046033
[PubMed - in process]
4.

Influence of setup and carbon source on the bacterial community of biocathodes in microbial electrolysis cells.

Croese E, Jeremiasse AW, Marshall IP, Spormann AM, Euverink GJ, Geelhoed JS, Stams AJ, Plugge CM.

Enzyme Microb Technol. 2014 Jul-Aug;61-62:67-75. doi: 10.1016/j.enzmictec.2014.04.019. Epub 2014 May 9.

PMID:
24910339
[PubMed - in process]
5.

Hydrogenase-independent uptake and metabolism of electrons by the archaeon Methanococcus maripaludis.

Lohner ST, Deutzmann JS, Logan BE, Leigh J, Spormann AM.

ISME J. 2014 Aug;8(8):1673-81. doi: 10.1038/ismej.2014.82. Epub 2014 May 20.

PMID:
24844759
[PubMed - indexed for MEDLINE]
6.

Identification of Desulfobacterales as primary hydrogenotrophs in a complex microbial mat community.

Burow LC, Woebken D, Marshall IP, Singer SW, Pett-Ridge J, Prufert-Bebout L, Spormann AM, Bebout BM, Weber PK, Hoehler TM.

Geobiology. 2014 May;12(3):221-30. doi: 10.1111/gbi.12080.

PMID:
24730641
[PubMed - in process]
7.

Fermentation couples Chloroflexi and sulfate-reducing bacteria to Cyanobacteria in hypersaline microbial mats.

Lee JZ, Burow LC, Woebken D, Everroad RC, Kubo MD, Spormann AM, Weber PK, Pett-Ridge J, Bebout BM, Hoehler TM.

Front Microbiol. 2014 Feb 26;5:61. doi: 10.3389/fmicb.2014.00061. eCollection 2014.

PMID:
24616716
[PubMed]
Free PMC Article
8.

Single cell genomic study of Dehalococcoidetes species from deep-sea sediments of the Peruvian Margin.

Kaster AK, Mayer-Blackwell K, Pasarelli B, Spormann AM.

ISME J. 2014 Sep;8(9):1831-42. doi: 10.1038/ismej.2014.24. Epub 2014 Mar 6.

PMID:
24599070
[PubMed - indexed for MEDLINE]
9.

Microbially enhanced dissolution of HgS in an acid mine drainage system in the California Coast Range.

Jew AD, Behrens SF, Rytuba JJ, Kappler A, Spormann AM, Brown GE Jr.

Geobiology. 2014 Jan;12(1):20-33. doi: 10.1111/gbi.12066. Epub 2013 Nov 13.

PMID:
24224806
[PubMed - indexed for MEDLINE]
10.

Inferring community dynamics of organohalide-respiring bacteria in chemostats by covariance of rdhA gene abundance.

Marshall IP, Azizian MF, Semprini L, Spormann AM.

FEMS Microbiol Ecol. 2014 Feb;87(2):428-40. doi: 10.1111/1574-6941.12235. Epub 2013 Oct 28.

PMID:
24118060
[PubMed - indexed for MEDLINE]
11.

PdeB, a cyclic Di-GMP-specific phosphodiesterase that regulates Shewanella oneidensis MR-1 motility and biofilm formation.

Chao L, Rakshe S, Leff M, Spormann AM.

J Bacteriol. 2013 Sep;195(17):3827-33. doi: 10.1128/JB.00498-13. Epub 2013 Jun 21.

PMID:
23794617
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The mxd operon in Shewanella oneidensis MR-1 is induced in response to starvation and regulated by ArcS/ArcA and BarA/UvrY.

Müller J, Shukla S, Jost KA, Spormann AM.

BMC Microbiol. 2013 May 27;13:119. doi: 10.1186/1471-2180-13-119.

PMID:
23705927
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Identification of a reductive tetrachloroethene dehalogenase in Shewanella sediminis.

Lohner ST, Spormann AM.

Philos Trans R Soc Lond B Biol Sci. 2013 Mar 11;368(1616):20120326. doi: 10.1098/rstb.2012.0326. Print 2013 Apr 19.

PMID:
23479755
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Effects of sulfate reduction on the bacterial community and kinetic parameters of a dechlorinating culture under chemostat growth conditions.

Berggren DR, Marshall IP, Azizian MF, Spormann AM, Semprini L.

Environ Sci Technol. 2013 Feb 19;47(4):1879-86. doi: 10.1021/es304244z. Epub 2013 Jan 28.

PMID:
23316874
[PubMed - indexed for MEDLINE]
15.

Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics.

Burow LC, Woebken D, Marshall IP, Lindquist EA, Bebout BM, Prufert-Bebout L, Hoehler TM, Tringe SG, Pett-Ridge J, Weber PK, Spormann AM, Singer SW.

ISME J. 2013 Apr;7(4):817-29. doi: 10.1038/ismej.2012.150. Epub 2012 Nov 29.

PMID:
23190731
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A Single-cell genome for Thiovulum sp.

Marshall IP, Blainey PC, Spormann AM, Quake SR.

Appl Environ Microbiol. 2012 Dec;78(24):8555-63. doi: 10.1128/AEM.02314-12. Epub 2012 Sep 28.

PMID:
23023751
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi.

Löffler FE, Yan J, Ritalahti KM, Adrian L, Edwards EA, Konstantinidis KT, Müller JA, Fullerton H, Zinder SH, Spormann AM.

Int J Syst Evol Microbiol. 2013 Feb;63(Pt 2):625-35. doi: 10.1099/ijs.0.034926-0. Epub 2012 Apr 27.

PMID:
22544797
[PubMed - indexed for MEDLINE]
18.

Identification of a novel cyanobacterial group as active diazotrophs in a coastal microbial mat using NanoSIMS analysis.

Woebken D, Burow LC, Prufert-Bebout L, Bebout BM, Hoehler TM, Pett-Ridge J, Spormann AM, Weber PK, Singer SW.

ISME J. 2012 Jul;6(7):1427-39. doi: 10.1038/ismej.2011.200. Epub 2012 Jan 12.

PMID:
22237543
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay.

Burow LC, Woebken D, Bebout BM, McMurdie PJ, Singer SW, Pett-Ridge J, Prufert-Bebout L, Spormann AM, Weber PK, Hoehler TM.

ISME J. 2012 Apr;6(4):863-74. doi: 10.1038/ismej.2011.142. Epub 2011 Oct 20.

PMID:
22011721
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

The Hydrogenase Chip: a tiling oligonucleotide DNA microarray technique for characterizing hydrogen-producing and -consuming microbes in microbial communities.

Marshall IP, Berggren DR, Azizian MF, Burow LC, Semprini L, Spormann AM.

ISME J. 2012 Apr;6(4):814-26. doi: 10.1038/ismej.2011.136. Epub 2011 Oct 13.

PMID:
21993396
[PubMed - indexed for MEDLINE]
Free PMC Article

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