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Results: 1 to 20 of 415

1.

Whole genome prediction for preimplantation genetic diagnosis.

Kumar A, Ryan A, Kitzman JO, Wemmer N, Snyder MW, Sigurjonsson S, Lee C, Banjevic M, Zarutskie PW, Lewis AP, Shendure J, Rabinowitz M.

Genome Med. 2015 Apr 8;7(1):35. doi: 10.1186/s13073-015-0160-4. eCollection 2015.

2.

Correction: AGAPE (Automated Genome Analysis PipelinE) for Pan-Genome Analysis of Saccharomyces cerevisiae.

Song G, Dickins BJ, Demeter J, Engel S, Gallagher J, Choe K, Dunn B, Snyder M, Cherry JM.

PLoS One. 2015 May 27;10(5):e0129184. doi: 10.1371/journal.pone.0129184. eCollection 2015.

3.

Characterization of novel transcripts in pseudorabies virus.

Tombácz D, Csabai Z, Oláh P, Havelda Z, Sharon D, Snyder M, Boldogkői Z.

Viruses. 2015 May 22;7(5):2727-44. doi: 10.3390/v7052727.

4.

Transcriptome Signature and Regulation in Human Somatic Cell Reprogramming.

Tanaka Y, Hysolli E, Su J, Xiang Y, Kim KY, Zhong M, Li Y, Heydari K, Euskirchen G, Snyder MP, Pan X, Weissman SM, Park IH.

Stem Cell Reports. 2015 Jun 9;4(6):1125-39. doi: 10.1016/j.stemcr.2015.04.009. Epub 2015 May 21.

5.

Collaborative drug therapy management: case studies of three community-based models of care.

Snyder ME, Earl TR, Gilchrist S, Greenberg M, Heisler H, Revels M, Matson-Koffman D.

Prev Chronic Dis. 2015 Mar 26;12:E39. doi: 10.5888/pcd12.140504.

6.
7.

Integrated systems analysis reveals a molecular network underlying autism spectrum disorders.

Li J, Shi M, Ma Z, Zhao S, Euskirchen G, Ziskin J, Urban A, Hallmayer J, Snyder M.

Mol Syst Biol. 2014 Dec 30;10:774. doi: 10.15252/msb.20145487.

8.

Exome sequencing and genome-wide copy number variant mapping reveal novel associations with sensorineural hereditary hearing loss.

Haraksingh RR, Jahanbani F, Rodriguez-Paris J, Gelernter J, Nadeau KC, Oghalai JS, Schrijver I, Snyder MP.

BMC Genomics. 2014 Dec 20;15:1155. doi: 10.1186/1471-2164-15-1155.

9.

Creating locally-resolved mobile-source emissions inputs for air quality modeling in support of an exposure study in Detroit, Michigan, USA.

Snyder M, Arunachalam S, Isakov V, Talgo K, Naess B, Valencia A, Omary M, Davis N, Cook R, Hanna A.

Int J Environ Res Public Health. 2014 Dec 9;11(12):12739-66. doi: 10.3390/ijerph111212739.

10.

Genomic era diagnosis and management of hereditary and sporadic colon cancer.

Esplin ED, Snyder MP.

World J Clin Oncol. 2014 Dec 10;5(5):1036-47. doi: 10.5306/wjco.v5.i5.1036. Review.

11.

The conserved histone deacetylase Rpd3 and its DNA binding subunit Ume6 control dynamic transcript architecture during mitotic growth and meiotic development.

Lardenois A, Stuparevic I, Liu Y, Law MJ, Becker E, Smagulova F, Waern K, Guilleux MH, Horecka J, Chu A, Kervarrec C, Strich R, Snyder M, Davis RW, Steinmetz LM, Primig M.

Nucleic Acids Res. 2015 Jan;43(1):115-28. doi: 10.1093/nar/gku1185. Epub 2014 Dec 3.

12.

Tryptophan PET-defined gross tumor volume offers better coverage of initial progression than standard MRI-based planning in glioblastoma patients.

Christensen M, Kamson DO, Snyder M, Kim H, Robinette NL, Mittal S, Juhász C.

J Radiat Oncol. 2014 Jun;3(2):131-138.

13.

Comparison of the transcriptional landscapes between human and mouse tissues.

Lin S, Lin Y, Nery JR, Urich MA, Breschi A, Davis CA, Dobin A, Zaleski C, Beer MA, Chapman WC, Gingeras TR, Ecker JR, Snyder MP.

Proc Natl Acad Sci U S A. 2014 Dec 2;111(48):17224-9. doi: 10.1073/pnas.1413624111. Epub 2014 Nov 20.

14.

Topologically associating domains are stable units of replication-timing regulation.

Pope BD, Ryba T, Dileep V, Yue F, Wu W, Denas O, Vera DL, Wang Y, Hansen RS, Canfield TK, Thurman RE, Cheng Y, Gülsoy G, Dennis JH, Snyder MP, Stamatoyannopoulos JA, Taylor J, Hardison RC, Kahveci T, Ren B, Gilbert DM.

Nature. 2014 Nov 20;515(7527):402-5. doi: 10.1038/nature13986.

15.

Principles of regulatory information conservation between mouse and human.

Cheng Y, Ma Z, Kim BH, Wu W, Cayting P, Boyle AP, Sundaram V, Xing X, Dogan N, Li J, Euskirchen G, Lin S, Lin Y, Visel A, Kawli T, Yang X, Patacsil D, Keller CA, Giardine B; Mouse ENCODE Consortium, Kundaje A, Wang T, Pennacchio LA, Weng Z, Hardison RC, Snyder MP.

Nature. 2014 Nov 20;515(7527):371-5. doi: 10.1038/nature13985.

16.

A comparative encyclopedia of DNA elements in the mouse genome.

Yue F, Cheng Y, Breschi A, Vierstra J, Wu W, Ryba T, Sandstrom R, Ma Z, Davis C, Pope BD, Shen Y, Pervouchine DD, Djebali S, Thurman RE, Kaul R, Rynes E, Kirilusha A, Marinov GK, Williams BA, Trout D, Amrhein H, Fisher-Aylor K, Antoshechkin I, DeSalvo G, See LH, Fastuca M, Drenkow J, Zaleski C, Dobin A, Prieto P, Lagarde J, Bussotti G, Tanzer A, Denas O, Li K, Bender MA, Zhang M, Byron R, Groudine MT, McCleary D, Pham L, Ye Z, Kuan S, Edsall L, Wu YC, Rasmussen MD, Bansal MS, Kellis M, Keller CA, Morrissey CS, Mishra T, Jain D, Dogan N, Harris RS, Cayting P, Kawli T, Boyle AP, Euskirchen G, Kundaje A, Lin S, Lin Y, Jansen C, Malladi VS, Cline MS, Erickson DT, Kirkup VM, Learned K, Sloan CA, Rosenbloom KR, Lacerda de Sousa B, Beal K, Pignatelli M, Flicek P, Lian J, Kahveci T, Lee D, Kent WJ, Ramalho Santos M, Herrero J, Notredame C, Johnson A, Vong S, Lee K, Bates D, Neri F, Diegel M, Canfield T, Sabo PJ, Wilken MS, Reh TA, Giste E, Shafer A, Kutyavin T, Haugen E, Dunn D, Reynolds AP, Neph S, Humbert R, Hansen RS, De Bruijn M, Selleri L, Rudensky A, Josefowicz S, Samstein R, Eichler EE, Orkin SH, Levasseur D, Papayannopoulou T, Chang KH, Skoultchi A, Gosh S, Disteche C, Treuting P, Wang Y, Weiss MJ, Blobel GA, Cao X, Zhong S, Wang T, Good PJ, Lowdon RF, Adams LB, Zhou XQ, Pazin MJ, Feingold EA, Wold B, Taylor J, Mortazavi A, Weissman SM, Stamatoyannopoulos JA, Snyder MP, Guigo R, Gingeras TR, Gilbert DM, Hardison RC, Beer MA, Ren B; Mouse ENCODE Consortium.

Nature. 2014 Nov 20;515(7527):355-64. doi: 10.1038/nature13992.

17.

Large-scale genomic sequencing of extraintestinal pathogenic Escherichia coli strains.

Salipante SJ, Roach DJ, Kitzman JO, Snyder MW, Stackhouse B, Butler-Wu SM, Lee C, Cookson BT, Shendure J.

Genome Res. 2015 Jan;25(1):119-28. doi: 10.1101/gr.180190.114. Epub 2014 Nov 4.

18.

STRESS AND TRAUMA: Psychotherapy and Pharmacotherapy for Depersonalization/Derealization Disorder.

Gentile JP, Snyder M, Marie Gillig P.

Innov Clin Neurosci. 2014 Jul;11(7-8):37-41.

19.

Widespread contribution of transposable elements to the innovation of gene regulatory networks.

Sundaram V, Cheng Y, Ma Z, Li D, Xing X, Edge P, Snyder MP, Wang T.

Genome Res. 2014 Dec;24(12):1963-76. doi: 10.1101/gr.168872.113. Epub 2014 Oct 15.

20.

Reply to Brunet and Doolittle: Both selected effect and causal role elements can influence human biology and disease.

Kellis M, Wold B, Snyder MP, Bernstein BE, Kundaje A, Marinov GK, Ward LD, Birney E, Crawford GE, Dekker J, Dunham I, Elnitski LL, Farnham PJ, Feingold EA, Gerstein M, Giddings MC, Gilbert DM, Gingeras TR, Green ED, Guigo R, Hubbard T, Kent J, Lieb JD, Myers RM, Pazin MJ, Ren B, Stamatoyannopoulos J, Weng Z, White KP, Hardison RC.

Proc Natl Acad Sci U S A. 2014 Aug 19;111(33):E3366. No abstract available.

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