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Results: 1 to 20 of 87

1.

Evolutionary Acquisition of Cysteines determines FOXO Paralog-Specific Redox Signaling.

Putker M, Vos H, van Dorenmalen K, de Ruiter H, Duran AG, Snel B, Burgering BM, Vermeulen M, Dansen TB.

Antioxid Redox Signal. 2014 Jul 29. [Epub ahead of print]

PMID:
25069953
[PubMed - as supplied by publisher]
2.

Large-scale genetic perturbations reveal regulatory networks and an abundance of gene-specific repressors.

Kemmeren P, Sameith K, van de Pasch LA, Benschop JJ, Lenstra TL, Margaritis T, O'Duibhir E, Apweiler E, van Wageningen S, Ko CW, van Heesch S, Kashani MM, Ampatziadis-Michailidis G, Brok MO, Brabers NA, Miles AJ, Bouwmeester D, van Hooff SR, van Bakel H, Sluiters E, Bakker LV, Snel B, Lijnzaad P, van Leenen D, Groot Koerkamp MJ, Holstege FC.

Cell. 2014 Apr 24;157(3):740-52. doi: 10.1016/j.cell.2014.02.054.

PMID:
24766815
[PubMed - indexed for MEDLINE]
3.

Small homologous blocks in phytophthora genomes do not point to an ancient whole-genome duplication.

van Hooff JJ, Snel B, Seidl MF.

Genome Biol Evol. 2014 May;6(5):1079-85. doi: 10.1093/gbe/evu081.

PMID:
24760277
[PubMed - in process]
Free PMC Article
4.

Quantitative label-free phosphoproteomics of six different life stages of the late blight pathogen Phytophthora infestans reveals abundant phosphorylation of members of the CRN effector family.

Resjö S, Ali A, Meijer HJ, Seidl MF, Snel B, Sandin M, Levander F, Govers F, Andreasson E.

J Proteome Res. 2014 Apr 4;13(4):1848-59. doi: 10.1021/pr4009095. Epub 2014 Mar 17.

PMID:
24588563
[PubMed - in process]
5.

The histone modification H3K27me3 is retained after gene duplication and correlates with conserved noncoding sequences in Arabidopsis.

Berke L, Snel B.

Genome Biol Evol. 2014 Mar;6(3):572-9. doi: 10.1093/gbe/evu040.

PMID:
24567304
[PubMed - in process]
Free PMC Article
6.

A subfamily of putative cytokinin receptors is revealed by an analysis of the evolution of the two-component signaling system of plants.

Gruhn N, Halawa M, Snel B, Seidl MF, Heyl A.

Plant Physiol. 2014 May;165(1):227-37. doi: 10.1104/pp.113.228080. Epub 2014 Feb 11.

PMID:
24520157
[PubMed - in process]
Free PMC Article
7.

Arrayed BUB recruitment modules in the kinetochore scaffold KNL1 promote accurate chromosome segregation.

Vleugel M, Tromer E, Omerzu M, Groenewold V, Nijenhuis W, Snel B, Kops GJ.

J Cell Biol. 2013 Dec 23;203(6):943-55.

PMID:
24344183
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Shared protein complex subunits contribute to explaining disrupted co-occurrence.

Schneider A, Seidl MF, Snel B.

PLoS Comput Biol. 2013;9(7):e1003124. doi: 10.1371/journal.pcbi.1003124. Epub 2013 Jul 18.

PMID:
23874172
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

A predicted functional gene network for the plant pathogen Phytophthora infestans as a framework for genomic biology.

Seidl MF, Schneider A, Govers F, Snel B.

BMC Genomics. 2013 Jul 17;14:483. doi: 10.1186/1471-2164-14-483.

PMID:
23865555
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Distinctive expansion of potential virulence genes in the genome of the oomycete fish pathogen Saprolegnia parasitica.

Jiang RH, de Bruijn I, Haas BJ, Belmonte R, Löbach L, Christie J, van den Ackerveken G, Bottin A, Bulone V, Díaz-Moreno SM, Dumas B, Fan L, Gaulin E, Govers F, Grenville-Briggs LJ, Horner NR, Levin JZ, Mammella M, Meijer HJ, Morris P, Nusbaum C, Oome S, Phillips AJ, van Rooyen D, Rzeszutek E, Saraiva M, Secombes CJ, Seidl MF, Snel B, Stassen JH, Sykes S, Tripathy S, van den Berg H, Vega-Arreguin JC, Wawra S, Young SK, Zeng Q, Dieguez-Uribeondo J, Russ C, Tyler BM, van West P.

PLoS Genet. 2013 Jun;9(6):e1003272. doi: 10.1371/journal.pgen.1003272. Epub 2013 Jun 13.

PMID:
23785293
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A TPR domain-containing N-terminal module of MPS1 is required for its kinetochore localization by Aurora B.

Nijenhuis W, von Castelmur E, Littler D, De Marco V, Tromer E, Vleugel M, van Osch MH, Snel B, Perrakis A, Kops GJ.

J Cell Biol. 2013 Apr 15;201(2):217-31. doi: 10.1083/jcb.201210033. Epub 2013 Apr 8.

PMID:
23569217
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Bioinformatic inference of specific and general transcription factor binding sites in the plant pathogen Phytophthora infestans.

Seidl MF, Wang RP, Van den Ackerveken G, Govers F, Snel B.

PLoS One. 2012;7(12):e51295. doi: 10.1371/journal.pone.0051295. Epub 2012 Dec 12.

PMID:
23251489
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

ABI4: versatile activator and repressor.

Wind JJ, Peviani A, Snel B, Hanson J, Smeekens SC.

Trends Plant Sci. 2013 Mar;18(3):125-32. doi: 10.1016/j.tplants.2012.10.004. Epub 2012 Nov 20.

PMID:
23182343
[PubMed - indexed for MEDLINE]
14.

Contribution of the epigenetic mark H3K27me3 to functional divergence after whole genome duplication in Arabidopsis.

Berke L, Sanchez-Perez GF, Snel B.

Genome Biol. 2012 Oct 3;13(10):R94. doi: 10.1186/gb-2012-13-10-r94.

PMID:
23034476
[PubMed - in process]
Free PMC Article
15.

Evolution and function of the mitotic checkpoint.

Vleugel M, Hoogendoorn E, Snel B, Kops GJ.

Dev Cell. 2012 Aug 14;23(2):239-50. doi: 10.1016/j.devcel.2012.06.013. Review.

PMID:
22898774
[PubMed - indexed for MEDLINE]
Free Article
16.

Gene duplications contribute to the overrepresentation of interactions between proteins of a similar age.

Fokkens L, Hogeweg P, Snel B.

BMC Evol Biol. 2012 Jun 25;12:99.

PMID:
22732003
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

The vertebrate mitotic checkpoint protein BUBR1 is an unusual pseudokinase.

Suijkerbuijk SJ, van Dam TJ, Karagöz GE, von Castelmur E, Hubner NC, Duarte AM, Vleugel M, Perrakis A, Rüdiger SG, Snel B, Kops GJ.

Dev Cell. 2012 Jun 12;22(6):1321-9. doi: 10.1016/j.devcel.2012.03.009.

PMID:
22698286
[PubMed - indexed for MEDLINE]
Free Article
18.

The R-spondin protein family.

de Lau WB, Snel B, Clevers HC.

Genome Biol. 2012;13(3):242. doi: 10.1186/gb-2012-13-3-242. Review.

PMID:
22439850
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Effector identification in the lettuce downy mildew Bremia lactucae by massively parallel transcriptome sequencing.

Stassen JH, Seidl MF, Vergeer PW, Nijman IJ, Snel B, Cuppen E, Van den Ackerveken G.

Mol Plant Pathol. 2012 Sep;13(7):719-31. doi: 10.1111/j.1364-3703.2011.00780.x. Epub 2012 Feb 1.

PMID:
22293108
[PubMed - indexed for MEDLINE]
20.

Reconstruction of oomycete genome evolution identifies differences in evolutionary trajectories leading to present-day large gene families.

Seidl MF, Van den Ackerveken G, Govers F, Snel B.

Genome Biol Evol. 2012;4(3):199-211. doi: 10.1093/gbe/evs003. Epub 2012 Jan 9.

PMID:
22230142
[PubMed - indexed for MEDLINE]
Free PMC Article

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