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Results: 8

1.

Regulatory elements of Caenorhabditis elegans ribosomal protein genes.

Sleumer MC, Wei G, Wang Y, Chang H, Xu T, Chen R, Zhang MQ.

BMC Genomics. 2012 Aug 28;13:433. doi: 10.1186/1471-2164-13-433.

2.

Conserved elements associated with ribosomal genes and their trans-splice acceptor sites in Caenorhabditis elegans.

Sleumer MC, Mah AK, Baillie DL, Jones SJ.

Nucleic Acids Res. 2010 May;38(9):2990-3004. doi: 10.1093/nar/gkq003. Epub 2010 Jan 25.

3.

Caenorhabditis elegans cisRED: a catalogue of conserved genomic elements.

Sleumer MC, Bilenky M, He A, Robertson G, Thiessen N, Jones SJ.

Nucleic Acids Res. 2009 Mar;37(4):1323-34. doi: 10.1093/nar/gkn1041. Epub 2009 Jan 16.

4.

ORegAnno: an open-access community-driven resource for regulatory annotation.

Griffith OL, Montgomery SB, Bernier B, Chu B, Kasaian K, Aerts S, Mahony S, Sleumer MC, Bilenky M, Haeussler M, Griffith M, Gallo SM, Giardine B, Hooghe B, Van Loo P, Blanco E, Ticoll A, Lithwick S, Portales-Casamar E, Donaldson IJ, Robertson G, Wadelius C, De Bleser P, Vlieghe D, Halfon MS, Wasserman W, Hardison R, Bergman CM, Jones SJ; Open Regulatory Annotation Consortium.

Nucleic Acids Res. 2008 Jan;36(Database issue):D107-13. Epub 2007 Nov 15.

5.

The molecular signature and cis-regulatory architecture of a C. elegans gustatory neuron.

Etchberger JF, Lorch A, Sleumer MC, Zapf R, Jones SJ, Marra MA, Holt RA, Moerman DG, Hobert O.

Genes Dev. 2007 Jul 1;21(13):1653-74.

6.

The ELT-2 GATA-factor and the global regulation of transcription in the C. elegans intestine.

McGhee JD, Sleumer MC, Bilenky M, Wong K, McKay SJ, Goszczynski B, Tian H, Krich ND, Khattra J, Holt RA, Baillie DL, Kohara Y, Marra MA, Jones SJ, Moerman DG, Robertson AG.

Dev Biol. 2007 Feb 15;302(2):627-45. Epub 2006 Oct 21.

7.

ORegAnno: an open access database and curation system for literature-derived promoters, transcription factor binding sites and regulatory variation.

Montgomery SB, Griffith OL, Sleumer MC, Bergman CM, Bilenky M, Pleasance ED, Prychyna Y, Zhang X, Jones SJ.

Bioinformatics. 2006 Mar 1;22(5):637-40. Epub 2006 Jan 5.

8.

cisRED: a database system for genome-scale computational discovery of regulatory elements.

Robertson G, Bilenky M, Lin K, He A, Yuen W, Dagpinar M, Varhol R, Teague K, Griffith OL, Zhang X, Pan Y, Hassel M, Sleumer MC, Pan W, Pleasance ED, Chuang M, Hao H, Li YY, Robertson N, Fjell C, Li B, Montgomery SB, Astakhova T, Zhou J, Sander J, Siddiqui AS, Jones SJ.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D68-73.

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