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Results: 1 to 20 of 34

1.

Expanding the RpoS/σS-network by RNA sequencing and identification of σS-controlled small RNAs in Salmonella.

Lévi-Meyrueis C, Monteil V, Sismeiro O, Dillies MA, Monot M, Jagla B, Coppée JY, Dupuy B, Norel F.

PLoS One. 2014 May 8;9(5):e96918. doi: 10.1371/journal.pone.0096918. eCollection 2014.

PMID:
24810289
[PubMed - in process]
Free PMC Article
2.

A putative regulatory genetic locus modulates virulence in the pathogen Leptospira interrogans.

Eshghi A, Becam J, Lambert A, Sismeiro O, Dillies MA, Jagla B, Wunder EA Jr, Ko AI, Coppee JY, Goarant C, Picardeau M.

Infect Immun. 2014 Jun;82(6):2542-52. doi: 10.1128/IAI.01803-14. Epub 2014 Mar 31.

PMID:
24686063
[PubMed - indexed for MEDLINE]
3.

Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum.

Siegel TN, Hon CC, Zhang Q, Lopez-Rubio JJ, Scheidig-Benatar C, Martins RM, Sismeiro O, Coppée JY, Scherf A.

BMC Genomics. 2014 Feb 22;15:150. doi: 10.1186/1471-2164-15-150.

PMID:
24559473
[PubMed - in process]
Free PMC Article
4.

The intestinal microbiota interferes with the microRNA response upon oral Listeria infection.

Archambaud C, Sismeiro O, Toedling J, Soubigou G, Bécavin C, Lechat P, Lebreton A, Ciaudo C, Cossart P.

MBio. 2013 Dec 10;4(6):e00707-13. doi: 10.1128/mBio.00707-13.

PMID:
24327339
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Massive activation of archaeal defense genes during viral infection.

Quax TE, Voet M, Sismeiro O, Dillies MA, Jagla B, Coppée JY, Sezonov G, Forterre P, van der Oost J, Lavigne R, Prangishvili D.

J Virol. 2013 Aug;87(15):8419-28. doi: 10.1128/JVI.01020-13. Epub 2013 May 22.

PMID:
23698312
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genome-wide identification of regulatory RNAs in the human pathogen Clostridium difficile.

Soutourina OA, Monot M, Boudry P, Saujet L, Pichon C, Sismeiro O, Semenova E, Severinov K, Le Bouguenec C, Coppée JY, Dupuy B, Martin-Verstraete I.

PLoS Genet. 2013 May;9(5):e1003493. doi: 10.1371/journal.pgen.1003493. Epub 2013 May 9.

PMID:
23675309
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Identification of RNA partners of viral proteins in infected cells.

Komarova AV, Combredet C, Sismeiro O, Dillies MA, Jagla B, Sanchez David RY, Vabret N, Coppée JY, Vidalain PO, Tangy F.

RNA Biol. 2013 Jun;10(6):944-56. doi: 10.4161/rna.24453. Epub 2013 Apr 1.

PMID:
23595062
[PubMed - indexed for MEDLINE]
8.

Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26.

Andres J, Arsène-Ploetze F, Barbe V, Brochier-Armanet C, Cleiss-Arnold J, Coppée JY, Dillies MA, Geist L, Joublin A, Koechler S, Lassalle F, Marchal M, Médigue C, Muller D, Nesme X, Plewniak F, Proux C, Ramírez-Bahena MH, Schenowitz C, Sismeiro O, Vallenet D, Santini JM, Bertin PN.

Genome Biol Evol. 2013;5(5):934-53. doi: 10.1093/gbe/evt061.

PMID:
23589360
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica.

Hon CC, Weber C, Sismeiro O, Proux C, Koutero M, Deloger M, Das S, Agrahari M, Dillies MA, Jagla B, Coppee JY, Bhattacharya A, Guillen N.

Nucleic Acids Res. 2013 Feb 1;41(3):1936-52. doi: 10.1093/nar/gks1271. Epub 2012 Dec 20.

PMID:
23258700
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Dicer-2- and Piwi-mediated RNA interference in Rift Valley fever virus-infected mosquito cells.

Léger P, Lara E, Jagla B, Sismeiro O, Mansuroglu Z, Coppée JY, Bonnefoy E, Bouloy M.

J Virol. 2013 Feb;87(3):1631-48. doi: 10.1128/JVI.02795-12. Epub 2012 Nov 21.

PMID:
23175368
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans.

Dhamgaye S, Bernard M, Lelandais G, Sismeiro O, Lemoine S, Coppée JY, Le Crom S, Prasad R, Devaux F.

BMC Genomics. 2012 Aug 16;13:396.

PMID:
22897889
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence.

Sahr T, Rusniok C, Dervins-Ravault D, Sismeiro O, Coppee JY, Buchrieser C.

RNA Biol. 2012 Apr;9(4):503-19. doi: 10.4161/rna.20270. Epub 2012 Apr 1.

PMID:
22546937
[PubMed - indexed for MEDLINE]
13.

Naive and primed murine pluripotent stem cells have distinct miRNA expression profiles.

Jouneau A, Ciaudo C, Sismeiro O, Brochard V, Jouneau L, Vandormael-Pournin S, Coppée JY, Zhou Q, Heard E, Antoniewski C, Cohen-Tannoudji M.

RNA. 2012 Feb;18(2):253-64. doi: 10.1261/rna.028878.111. Epub 2011 Dec 27.

PMID:
22201644
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans.

Koechler S, Cleiss-Arnold J, Proux C, Sismeiro O, Dillies MA, Goulhen-Chollet F, Hommais F, Lièvremont D, Arsène-Ploetze F, Coppée JY, Bertin PN.

BMC Microbiol. 2010 Feb 18;10:53. doi: 10.1186/1471-2180-10-53.

PMID:
20167112
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The endogenous siRNA pathway is involved in heterochromatin formation in Drosophila.

Fagegaltier D, Bougé AL, Berry B, Poisot E, Sismeiro O, Coppée JY, Théodore L, Voinnet O, Antoniewski C.

Proc Natl Acad Sci U S A. 2009 Dec 15;106(50):21258-63. doi: 10.1073/pnas.0809208105. Epub 2009 Nov 30.

PMID:
19948966
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Control of flagellar gene regulation in Legionella pneumophila and its relation to growth phase.

Albert-Weissenberger C, Sahr T, Sismeiro O, Hacker J, Heuner K, Buchrieser C.

J Bacteriol. 2010 Jan;192(2):446-55. doi: 10.1128/JB.00610-09. Epub 2009 Nov 13.

PMID:
19915024
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

FlexiChip package: an universal microarray with a dedicated analysis software for high-thoughput SNPs detection linked to anti-malarial drug resistance.

Steenkeste N, Dillies MA, Khim N, Sismeiro O, Chy S, Lim P, Crameri A, Bouchier C, Mercereau-Puijalon O, Beck HP, Imwong M, Dondorp AM, Socheat D, Rogier C, Coppée JY, Ariey F.

Malar J. 2009 Oct 15;8:229. doi: 10.1186/1475-2875-8-229.

PMID:
19828052
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Genomic polymorphism in the population of Candida glabrata: gene copy-number variation and chromosomal translocations.

Muller H, Thierry A, Coppée JY, Gouyette C, Hennequin C, Sismeiro O, Talla E, Dujon B, Fairhead C.

Fungal Genet Biol. 2009 Mar;46(3):264-76. doi: 10.1016/j.fgb.2008.11.006. Epub 2008 Dec 6.

PMID:
19084610
[PubMed - indexed for MEDLINE]
19.

Dynamic RNA profiling in Plasmodium falciparum synchronized blood stages exposed to lethal doses of artesunate.

Natalang O, Bischoff E, Deplaine G, Proux C, Dillies MA, Sismeiro O, Guigon G, Bonnefoy S, Patarapotikul J, Mercereau-Puijalon O, Coppée JY, David PH.

BMC Genomics. 2008 Aug 18;9:388. doi: 10.1186/1471-2164-9-388.

PMID:
18706115
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Chemotaxis of Entamoeba histolytica towards the pro-inflammatory cytokine TNF is based on PI3K signalling, cytoskeleton reorganization and the Galactose/N-acetylgalactosamine lectin activity.

Blazquez S, Guigon G, Weber C, Syan S, Sismeiro O, Coppée JY, Labruyère E, Guillén N.

Cell Microbiol. 2008 Aug;10(8):1676-86. doi: 10.1111/j.1462-5822.2008.01158.x. Epub 2008 Apr 16.

PMID:
18419774
[PubMed - indexed for MEDLINE]

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