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Identification and Characterization of Terpene Synthases Potentially Involved in the Formation of Volatile Terpenes in Carrot (Daucus carota L.) Roots.

Mossaab Y, Tholl D, Cormier G, Jensen R, Simon PW, Ibdah M.

J Agric Food Chem. 2015 Apr 30. [Epub ahead of print]


A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.

Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW.

BMC Genomics. 2014 Dec 16;15:1118. doi: 10.1186/1471-2164-15-1118.


Composition and (in)homogeneity of carotenoid crystals in carrot cells revealed by high resolution Raman imaging.

Roman M, Marzec KM, Grzebelus E, Simon PW, Baranska M, Baranski R.

Spectrochim Acta A Mol Biomol Spectrosc. 2014 Oct 18;136PC:1395-1400. doi: 10.1016/j.saa.2014.10.026. [Epub ahead of print]


Morphometrics of Daucus (Apiaceae): a counterpart to a phylogenomic study.

Arbizu C, Reitsma KR, Simon PW, Spooner DM.

Am J Bot. 2014 Nov;101(11):2005-16. doi: 10.3732/ajb.1400252. Epub 2014 Oct 30.


Phylogenomics of the carrot genus (Daucus, Apiaceae).

Arbizu C, Ruess H, Senalik D, Simon PW, Spooner DM.

Am J Bot. 2014 Oct;101(10):1666-85. doi: 10.3732/ajb.1400106. Epub 2014 Jul 30.


Mitochondrial atp9 genes from petaloid male-sterile and male-fertile carrots differ in their status of heteroplasmy, recombination involvement, post-transcriptional processing as well as accumulation of RNA and protein product.

Szklarczyk M, Szymański M, Wójcik-Jagła M, Simon PW, Weihe A, Börner T.

Theor Appl Genet. 2014 Aug;127(8):1689-701. doi: 10.1007/s00122-014-2331-x. Epub 2014 Jun 10.


Conversion of a diversity arrays technology marker differentiating wild and cultivated carrots to a co-dominant cleaved amplified polymorphic site marker.

Macko-Podgórni A, Iorizzo M, Smółka K, Simon PW, Grzebelus D.

Acta Biochim Pol. 2014;61(1):19-22. Epub 2014 Mar 17.


Diversity, genetic mapping, and signatures of domestication in the carrot (Daucus carota L.) genome, as revealed by Diversity Arrays Technology (DArT) markers.

Grzebelus D, Iorizzo M, Senalik D, Ellison S, Cavagnaro P, Macko-Podgorni A, Heller-Uszynska K, Kilian A, Nothnagel T, Allender C, Simon PW, Baranski R.

Mol Breed. 2014;33:625-637. Epub 2013 Oct 26.


Maize genotype and food matrix affect the provitamin A carotenoid bioefficacy from staple and carrot-fortified feeds in Mongolian gerbils (Meriones unguiculatus).

Schmaelzle S, Gannon B, Crawford S, Arscott SA, Goltz S, Palacios-Rojas N, Pixley KV, Simon PW, Tanumihardjo SA.

J Agric Food Chem. 2014 Jan 8;62(1):136-43. doi: 10.1021/jf403548w. Epub 2013 Dec 23.


Inheritance and mapping of Mj-2, a new source of root-knot nematode (Meloidogyne javanica) resistance in carrot.

Ali A, Matthews WC, Cavagnaro PF, Iorizzo M, Roberts PA, Simon PW.

J Hered. 2014 Mar-Apr;105(2):288-91. doi: 10.1093/jhered/est090. Epub 2013 Dec 11.


Formation of norisoprenoid flavor compounds in carrot (Daucus carota L.) roots: characterization of a cyclic-specific carotenoid cleavage dioxygenase 1 gene.

Yahyaa M, Bar E, Dubey NK, Meir A, Davidovich-Rikanati R, Hirschberg J, Aly R, Tholl D, Simon PW, Tadmor Y, Lewinsohn E, Ibdah M.

J Agric Food Chem. 2013 Dec 18;61(50):12244-52. doi: 10.1021/jf404085k. Epub 2013 Dec 5.


Next-generation sequencing, FISH mapping and synteny-based modeling reveal mechanisms of decreasing dysploidy in Cucumis.

Yang L, Koo DH, Li D, Zhang T, Jiang J, Luan F, Renner SS, Hénaff E, Sanseverino W, Garcia-Mas J, Casacuberta J, Senalik DA, Simon PW, Chen J, Weng Y.

Plant J. 2014 Jan;77(1):16-30. doi: 10.1111/tpj.12355. Epub 2013 Dec 3.


DcSto: carrot Stowaway-like elements are abundant, diverse, and polymorphic.

Macko-Podgorni A, Nowicka A, Grzebelus E, Simon PW, Grzebelus D.

Genetica. 2013 Jun;141(4-6):255-67. doi: 10.1007/s10709-013-9725-6. Epub 2013 Jun 18.


Genetic structure and domestication of carrot (Daucus carota subsp. sativus) (Apiaceae).

Iorizzo M, Senalik DA, Ellison SL, Grzebelus D, Cavagnaro PF, Allender C, Brunet J, Spooner DM, Van Deynze A, Simon PW.

Am J Bot. 2013 May;100(5):930-8. doi: 10.3732/ajb.1300055. Epub 2013 Apr 17.


Expression and mapping of anthocyanin biosynthesis genes in carrot.

Yildiz M, Willis DK, Cavagnaro PF, Iorizzo M, Abak K, Simon PW.

Theor Appl Genet. 2013 Jul;126(7):1689-702. doi: 10.1007/s00122-013-2084-y. Epub 2013 Mar 24.


Molecular mapping of vernalization requirement and fertility restoration genes in carrot.

Alessandro MS, Galmarini CR, Iorizzo M, Simon PW.

Theor Appl Genet. 2013 Feb;126(2):415-23. doi: 10.1007/s00122-012-1989-1. Epub 2012 Sep 27.


Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.).

Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE.

Theor Appl Genet. 2012 Jan;124(1):87-96. doi: 10.1007/s00122-011-1689-2. Epub 2011 Sep 9.


De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity.

Iorizzo M, Senalik DA, Grzebelus D, Bowman M, Cavagnaro PF, Matvienko M, Ashrafi H, Van Deynze A, Simon PW.

BMC Genomics. 2011 Aug 2;12:389. doi: 10.1186/1471-2164-12-389.


Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.

Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW.

BMC Genomics. 2011 Aug 1;12:386. doi: 10.1186/1471-2164-12-386.


Comparative FISH mapping of Daucus species (Apiaceae family).

Iovene M, Cavagnaro PF, Senalik D, Buell CR, Jiang J, Simon PW.

Chromosome Res. 2011 May;19(4):493-506. doi: 10.1007/s10577-011-9202-y. Epub 2011 May 6.

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