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Prostaglandin-modulated umbilical cord blood hematopoietic stem cell transplantation.

Cutler C, Multani P, Robbins D, Kim HT, Le T, Hoggatt J, Pelus LM, Desponts C, Chen YB, Rezner B, Armand P, Koreth J, Glotzbecker B, Ho VT, Alyea E, Isom M, Kao G, Armant M, Silberstein L, Hu P, Soiffer RJ, Scadden DT, Ritz J, Goessling W, North TE, Mendlein J, Ballen K, Zon LI, Antin JH, Shoemaker DD.

Blood. 2013 Oct 24;122(17):3074-81. doi: 10.1182/blood-2013-05-503177. Epub 2013 Aug 30.


Species delimitation: a case study in a problematic ant taxon.

Ross KG, Gotzek D, Ascunce MS, Shoemaker DD.

Syst Biol. 2010 Mar;59(2):162-84. doi: 10.1093/sysbio/syp089. Epub 2009 Dec 14.


Gene discovery using massively parallel pyrosequencing to develop ESTs for the flesh fly Sarcophaga crassipalpis.

Hahn DA, Ragland GJ, Shoemaker DD, Denlinger DL.

BMC Genomics. 2009 May 19;10:234. doi: 10.1186/1471-2164-10-234.


Estimation of the number of founders of an invasive pest insect population: the fire ant Solenopsis invicta in the USA.

Ross KG, Shoemaker DD.

Proc Biol Sci. 2008 Oct 7;275(1648):2231-40. doi: 10.1098/rspb.2008.0412.


Molecular phylogeny of fire ants of the Solenopsis saevissima species-group based on mtDNA sequences.

Shoemaker DD, Ahrens ME, Ross KG.

Mol Phylogenet Evol. 2006 Jan;38(1):200-15. Epub 2005 Sep 19.


Species delimitation in native South American fire ants.

Ross KG, Shoemaker DD.

Mol Ecol. 2005 Oct;14(11):3419-38.


Social parasitism in fire ants (Solenopsis spp.): a potential mechanism for interspecies transfer of Wolbachia.

Dedeine F, Ahrens M, Calcaterra L, Shoemaker DD.

Mol Ecol. 2005 Apr;14(5):1543-8.


Committee on Food Nutrition.

Woollard DC, Shoemaker DD, Ackman RG, Eitenmiller RR, Mossoba MM, Sharpless KE, Smith R, Wolf WR, Bonnin E, Phillips JG, Williams SM.

J AOAC Int. 2005 Jan-Feb;88(1):371-2. No abstract available.


Decreased diversity but increased substitution rate in host mtDNA as a consequence of Wolbachia endosymbiont infection.

Shoemaker DD, Dyer KA, Ahrens M, McAbee K, Jaenike J.

Genetics. 2004 Dec;168(4):2049-58.


A comprehensive transcript index of the human genome generated using microarrays and computational approaches.

Schadt EE, Edwards SW, GuhaThakurta D, Holder D, Ying L, Svetnik V, Leonardson A, Hart KW, Russell A, Li G, Cavet G, Castle J, McDonagh P, Kan Z, Chen R, Kasarskis A, Margarint M, Caceres RM, Johnson JM, Armour CD, Garrett-Engele PW, Tsinoremas NF, Shoemaker DD.

Genome Biol. 2004;5(10):R73. Epub 2004 Sep 23.


Discovering modes of action for therapeutic compounds using a genome-wide screen of yeast heterozygotes.

Lum PY, Armour CD, Stepaniants SB, Cavet G, Wolf MK, Butler JS, Hinshaw JC, Garnier P, Prestwich GD, Leonardson A, Garrett-Engele P, Rush CM, Bard M, Schimmack G, Phillips JW, Roberts CJ, Shoemaker DD.

Cell. 2004 Jan 9;116(1):121-37.


Alternative genetic foundations for a key social polymorphism in fire ants.

Ross KG, Krieger MJ, Shoemaker DD.

Genetics. 2003 Dec;165(4):1853-67.


Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays.

Johnson JM, Castle J, Garrett-Engele P, Kan Z, Loerch PM, Armour CD, Santos R, Schadt EE, Stoughton R, Shoemaker DD.

Science. 2003 Dec 19;302(5653):2141-4.


DNA helicase gene interaction network defined using synthetic lethality analyzed by microarray.

Ooi SL, Shoemaker DD, Boeke JD.

Nat Genet. 2003 Nov;35(3):277-86. Epub 2003 Oct 19.


Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing.

Castle J, Garrett-Engele P, Armour CD, Duenwald SJ, Loerch PM, Meyer MR, Schadt EE, Stoughton R, Parrish ML, Shoemaker DD, Johnson JM.

Genome Biol. 2003;4(10):R66. Epub 2003 Sep 19.


Parallel analysis of tagged deletion mutants efficiently identifies genes involved in endoplasmic reticulum biogenesis.

Wright R, Parrish ML, Cadera E, Larson L, Matson CK, Garrett-Engele P, Armour C, Lum PY, Shoemaker DD.

Yeast. 2003 Jul 30;20(10):881-92.


Microarray standard data set and figures of merit for comparing data processing methods and experiment designs.

He YD, Dai H, Schadt EE, Cavet G, Edwards SW, Stepaniants SB, Duenwald S, Kleinhanz R, Jones AR, Shoemaker DD, Stoughton RB.

Bioinformatics. 2003 May 22;19(8):956-65.

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