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Results: 1 to 20 of 177

1.

Cadherin juxtamembrane region derived peptides inhibit TGFβ1 induced gene expression.

Stavropoulos I, Golla K, Moran N, Martin F, Shields DC.

Bioarchitecture. 2014 May 1;4(3):103-110. Epub 2014 Aug 9.

PMID:
25108297
[PubMed - as supplied by publisher]
2.

In silico approaches to predict the potential of milk protein-derived peptides as dipeptidyl peptidase IV (DPP-IV) inhibitors.

Nongonierma AB, Mooney C, Shields DC, FitzGerald RJ.

Peptides. 2014 Jul;57:43-51. doi: 10.1016/j.peptides.2014.04.018. Epub 2014 May 2.

PMID:
24793774
[PubMed - in process]
3.

Reward and reinforcement activity in the nucleus accumbens during learning.

Gale JT, Shields DC, Ishizawa Y, Eskandar EN.

Front Behav Neurosci. 2014 Apr 3;8:114. doi: 10.3389/fnbeh.2014.00114. eCollection 2014.

PMID:
24765069
[PubMed]
Free PMC Article
4.

Predicting the important enzymes in human breast milk digestion.

Khaldi N, Vijayakumar V, Dallas DC, Guerrero A, Wickramasinghe S, Smilowitz JT, Medrano JF, Lebrilla CB, Shields DC, German JB.

J Agric Food Chem. 2014 Jul 23;62(29):7225-32. doi: 10.1021/jf405601e. Epub 2014 Jul 10.

PMID:
24620897
[PubMed - in process]
5.

Potential of known and short prokaryotic protein motifs as a basis for novel peptide-based antibacterial therapeutics: a computational survey.

Ruhanen H, Hurley D, Ghosh A, O'Brien KT, Johnston CR, Shields DC.

Front Microbiol. 2014 Jan 21;5:4. doi: 10.3389/fmicb.2014.00004. eCollection 2014.

PMID:
24478765
[PubMed]
Free PMC Article
6.

Amino acid enrichment and compositional changes among mammalian milk proteins and the resulting nutritional consequences.

Khaldi N, Holton TA, Shields DC.

J Dairy Sci. 2014 Mar;97(3):1248-58. doi: 10.3168/jds.2013-7317. Epub 2014 Jan 25.

PMID:
24472131
[PubMed - in process]
7.

A historical perspective: stereotactic lesions for the treatment of epilepsy.

Leiphart JW, Young RM, Shields DC.

Seizure. 2014 Jan;23(1):1-5. doi: 10.1016/j.seizure.2013.10.006. Epub 2013 Oct 19.

PMID:
24216485
[PubMed - in process]
8.

CPPpred: prediction of cell penetrating peptides.

Holton TA, Pollastri G, Shields DC, Mooney C.

Bioinformatics. 2013 Dec 1;29(23):3094-6. doi: 10.1093/bioinformatics/btt518. Epub 2013 Sep 23.

PMID:
24064418
[PubMed - indexed for MEDLINE]
9.

Predicting binding within disordered protein regions to structurally characterised peptide-binding domains.

Khan W, Duffy F, Pollastri G, Shields DC, Mooney C.

PLoS One. 2013 Sep 3;8(9):e72838. doi: 10.1371/journal.pone.0072838. eCollection 2013.

PMID:
24019881
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Genome-wide analysis of blood pressure variability and ischemic stroke.

Yadav S, Cotlarciuc I, Munroe PB, Khan MS, Nalls MA, Bevan S, Cheng YC, Chen WM, Malik R, McCarthy NS, Holliday EG, Speed D, Hasan N, Pucek M, Rinne PE, Sever P, Stanton A, Shields DC, Maguire JM, McEvoy M, Scott RJ, Ferrucci L, Macleod MJ, Attia J, Markus HS, Sale MM, Worrall BB, Mitchell BD, Dichgans M, Sudlow C, Meschia JF, Rothwell PM, Caulfield M, Sharma P; International Stroke Genetics Consortium.

Stroke. 2013 Oct;44(10):2703-9. doi: 10.1161/STROKEAHA.113.002186. Epub 2013 Aug 8.

PMID:
23929743
[PubMed - indexed for MEDLINE]
11.

Critical role of calpain in spinal cord degeneration in Parkinson's disease.

Samantaray S, Knaryan VH, Shields DC, Banik NL.

J Neurochem. 2013 Dec;127(6):880-90. doi: 10.1111/jnc.12374. Epub 2013 Aug 20.

PMID:
23875735
[PubMed - indexed for MEDLINE]
12.

SLiMScape: a protein short linear motif analysis plugin for Cytoscape.

O'Brien KT, Haslam NJ, Shields DC.

BMC Bioinformatics. 2013 Jul 15;14:224. doi: 10.1186/1471-2105-14-224.

PMID:
23855714
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Inhibition of dipeptidyl peptidase IV and xanthine oxidase by amino acids and dipeptides.

Nongonierma AB, Mooney C, Shields DC, Fitzgerald RJ.

Food Chem. 2013 Nov 1;141(1):644-53. doi: 10.1016/j.foodchem.2013.02.115. Epub 2013 Mar 7.

PMID:
23768405
[PubMed - indexed for MEDLINE]
14.

Marked variability in the extent of protein disorder within and between viral families.

Pushker R, Mooney C, Davey NE, Jacqué JM, Shields DC.

PLoS One. 2013 Apr 19;8(4):e60724. doi: 10.1371/journal.pone.0060724. Print 2013.

PMID:
23620725
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Identification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders.

den Hoed M, Eijgelsheim M, Esko T, Brundel BJ, Peal DS, Evans DM, Nolte IM, Segrè AV, Holm H, Handsaker RE, Westra HJ, Johnson T, Isaacs A, Yang J, Lundby A, Zhao JH, Kim YJ, Go MJ, Almgren P, Bochud M, Boucher G, Cornelis MC, Gudbjartsson D, Hadley D, van der Harst P, Hayward C, den Heijer M, Igl W, Jackson AU, Kutalik Z, Luan J, Kemp JP, Kristiansson K, Ladenvall C, Lorentzon M, Montasser ME, Njajou OT, O'Reilly PF, Padmanabhan S, St Pourcain B, Rankinen T, Salo P, Tanaka T, Timpson NJ, Vitart V, Waite L, Wheeler W, Zhang W, Draisma HH, Feitosa MF, Kerr KF, Lind PA, Mihailov E, Onland-Moret NC, Song C, Weedon MN, Xie W, Yengo L, Absher D, Albert CM, Alonso A, Arking DE, de Bakker PI, Balkau B, Barlassina C, Benaglio P, Bis JC, Bouatia-Naji N, Brage S, Chanock SJ, Chines PS, Chung M, Darbar D, Dina C, Dörr M, Elliott P, Felix SB, Fischer K, Fuchsberger C, de Geus EJ, Goyette P, Gudnason V, Harris TB, Hartikainen AL, Havulinna AS, Heckbert SR, Hicks AA, Hofman A, Holewijn S, Hoogstra-Berends F, Hottenga JJ, Jensen MK, Johansson A, Junttila J, Kääb S, Kanon B, Ketkar S, Khaw KT, Knowles JW, Kooner AS, Kors JA, Kumari M, Milani L, Laiho P, Lakatta EG, Langenberg C, Leusink M, Liu Y, Luben RN, Lunetta KL, Lynch SN, Markus MR, Marques-Vidal P, Mateo Leach I, McArdle WL, McCarroll SA, Medland SE, Miller KA, Montgomery GW, Morrison AC, Müller-Nurasyid M, Navarro P, Nelis M, O'Connell JR, O'Donnell CJ, Ong KK, Newman AB, Peters A, Polasek O, Pouta A, Pramstaller PP, Psaty BM, Rao DC, Ring SM, Rossin EJ, Rudan D, Sanna S, Scott RA, Sehmi JS, Sharp S, Shin JT, Singleton AB, Smith AV, Soranzo N, Spector TD, Stewart C, Stringham HM, Tarasov KV, Uitterlinden AG, Vandenput L, Hwang SJ, Whitfield JB, Wijmenga C, Wild SH, Willemsen G, Wilson JF, Witteman JC, Wong A, Wong Q, Jamshidi Y, Zitting P, Boer JM, Boomsma DI, Borecki IB, van Duijn CM, Ekelund U, Forouhi NG, Froguel P, Hingorani A, Ingelsson E, Kivimaki M, Kronmal RA, Kuh D, Lind L, Martin NG, Oostra BA, Pedersen NL, Quertermous T, Rotter JI, van der Schouw YT, Verschuren WM, Walker M, Albanes D, Arnar DO, Assimes TL, Bandinelli S, Boehnke M, de Boer RA, Bouchard C, Caulfield WL, Chambers JC, Curhan G, Cusi D, Eriksson J, Ferrucci L, van Gilst WH, Glorioso N, de Graaf J, Groop L, Gyllensten U, Hsueh WC, Hu FB, Huikuri HV, Hunter DJ, Iribarren C, Isomaa B, Jarvelin MR, Jula A, Kähönen M, Kiemeney LA, van der Klauw MM, Kooner JS, Kraft P, Iacoviello L, Lehtimäki T, Lokki ML, Mitchell BD, Navis G, Nieminen MS, Ohlsson C, Poulter NR, Qi L, Raitakari OT, Rimm EB, Rioux JD, Rizzi F, Rudan I, Salomaa V, Sever PS, Shields DC, Shuldiner AR, Sinisalo J, Stanton AV, Stolk RP, Strachan DP, Tardif JC, Thorsteinsdottir U, Tuomilehto J, van Veldhuisen DJ, Virtamo J, Viikari J, Vollenweider P, Waeber G, Widen E, Cho YS, Olsen JV, Visscher PM, Willer C, Franke L; Global BPgen Consortium; CARDIoGRAM Consortium, Erdmann J, Thompson JR; PR GWAS Consortium, Pfeufer A; QRS GWAS Consortium, Sotoodehnia N; QT-IGC Consortium, Newton-Cheh C; CHARGE-AF Consortium, Ellinor PT, Stricker BH, Metspalu A, Perola M, Beckmann JS, Smith GD, Stefansson K, Wareham NJ, Munroe PB, Sibon OC, Milan DJ, Snieder H, Samani NJ, Loos RJ.

Nat Genet. 2013 Jun;45(6):621-31. doi: 10.1038/ng.2610. Epub 2013 Apr 14.

PMID:
23583979
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

SCL-Epred: a generalised de novo eukaryotic protein subcellular localisation predictor.

Mooney C, Cessieux A, Shields DC, Pollastri G.

Amino Acids. 2013 Aug;45(2):291-9. doi: 10.1007/s00726-013-1491-3. Epub 2013 Apr 9.

PMID:
23568340
[PubMed - indexed for MEDLINE]
17.

PeptideLocator: prediction of bioactive peptides in protein sequences.

Mooney C, Haslam NJ, Holton TA, Pollastri G, Shields DC.

Bioinformatics. 2013 May 1;29(9):1120-6. doi: 10.1093/bioinformatics/btt103. Epub 2013 Mar 16.

PMID:
23505299
[PubMed - indexed for MEDLINE]
Free Article
18.

A genome-wide association study of recipient genotype and medium-term kidney allograft function.

O'Brien RP, Phelan PJ, Conroy J, O'Kelly P, Green A, Keogan M, O'Neill D, Jennings S, Traynor C, Casey J, McCormack M, Conroy R, Chubb A, Ennis S, Shields DC, Cavalleri GL, Conlon PJ.

Clin Transplant. 2013 May-Jun;27(3):379-87. doi: 10.1111/ctr.12093. Epub 2013 Feb 21.

PMID:
23432519
[PubMed - indexed for MEDLINE]
19.

EnzymePredictor: a tool for predicting and visualizing enzymatic cleavages of digested proteins.

Vijayakumar V, Guerrero AN, Davey N, Lebrilla CB, Shields DC, Khaldi N.

J Proteome Res. 2012 Dec 7;11(12):6056-65. doi: 10.1021/pr300721f. Epub 2012 Nov 9.

PMID:
23098558
[PubMed - indexed for MEDLINE]
20.

Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.

Asselbergs FW, Guo Y, van Iperen EP, Sivapalaratnam S, Tragante V, Lanktree MB, Lange LA, Almoguera B, Appelman YE, Barnard J, Baumert J, Beitelshees AL, Bhangale TR, Chen YD, Gaunt TR, Gong Y, Hopewell JC, Johnson T, Kleber ME, Langaee TY, Li M, Li YR, Liu K, McDonough CW, Meijs MF, Middelberg RP, Musunuru K, Nelson CP, O'Connell JR, Padmanabhan S, Pankow JS, Pankratz N, Rafelt S, Rajagopalan R, Romaine SP, Schork NJ, Shaffer J, Shen H, Smith EN, Tischfield SE, van der Most PJ, van Vliet-Ostaptchouk JV, Verweij N, Volcik KA, Zhang L, Bailey KR, Bailey KM, Bauer F, Boer JM, Braund PS, Burt A, Burton PR, Buxbaum SG, Chen W, Cooper-Dehoff RM, Cupples LA, deJong JS, Delles C, Duggan D, Fornage M, Furlong CE, Glazer N, Gums JG, Hastie C, Holmes MV, Illig T, Kirkland SA, Kivimaki M, Klein R, Klein BE, Kooperberg C, Kottke-Marchant K, Kumari M, LaCroix AZ, Mallela L, Murugesan G, Ordovas J, Ouwehand WH, Post WS, Saxena R, Scharnagl H, Schreiner PJ, Shah T, Shields DC, Shimbo D, Srinivasan SR, Stolk RP, Swerdlow DI, Taylor HA Jr, Topol EJ, Toskala E, van Pelt JL, van Setten J, Yusuf S, Whittaker JC, Zwinderman AH; LifeLines Cohort Study, Anand SS, Balmforth AJ, Berenson GS, Bezzina CR, Boehm BO, Boerwinkle E, Casas JP, Caulfield MJ, Clarke R, Connell JM, Cruickshanks KJ, Davidson KW, Day IN, de Bakker PI, Doevendans PA, Dominiczak AF, Hall AS, Hartman CA, Hengstenberg C, Hillege HL, Hofker MH, Humphries SE, Jarvik GP, Johnson JA, Kaess BM, Kathiresan S, Koenig W, Lawlor DA, März W, Melander O, Mitchell BD, Montgomery GW, Munroe PB, Murray SS, Newhouse SJ, Onland-Moret NC, Poulter N, Psaty B, Redline S, Rich SS, Rotter JI, Schunkert H, Sever P, Shuldiner AR, Silverstein RL, Stanton A, Thorand B, Trip MD, Tsai MY, van der Harst P, van der Schoot E, van der Schouw YT, Verschuren WM, Watkins H, Wilde AA, Wolffenbuttel BH, Whitfield JB, Hovingh GK, Ballantyne CM, Wijmenga C, Reilly MP, Martin NG, Wilson JG, Rader DJ, Samani NJ, Reiner AP, Hegele RA, Kastelein JJ, Hingorani AD, Talmud PJ, Hakonarson H, Elbers CC, Keating BJ, Drenos F.

Am J Hum Genet. 2012 Nov 2;91(5):823-38. doi: 10.1016/j.ajhg.2012.08.032. Epub 2012 Oct 11.

PMID:
23063622
[PubMed - indexed for MEDLINE]
Free PMC Article

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