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Results: 1 to 20 of 183

1.

Virtual Screening Using Combinatorial Cyclic Peptide Libraries Reveals Protein Interfaces Readily Targetable by Cyclic Peptides.

Duffy FJ, O'Donovan D, Devocelle M, Moran N, O'Connell DJ, Shields DC.

J Chem Inf Model. 2015 Feb 20. [Epub ahead of print]

PMID:
25668361
[PubMed - as supplied by publisher]
2.

Long-term treatment with responsive brain stimulation in adults with refractory partial seizures.

Bergey GK, Morrell MJ, Mizrahi EM, Goldman A, King-Stephens D, Nair D, Srinivasan S, Jobst B, Gross RE, Shields DC, Barkley G, Salanova V, Olejniczak P, Cole A, Cash SS, Noe K, Wharen R, Worrell G, Murro AM, Edwards J, Duchowny M, Spencer D, Smith M, Geller E, Gwinn R, Skidmore C, Eisenschenk S, Berg M, Heck C, Van Ness P, Fountain N, Rutecki P, Massey A, O'Donovan C, Labar D, Duckrow RB, Hirsch LJ, Courtney T, Sun FT, Seale CG.

Neurology. 2015 Feb 24;84(8):810-7. doi: 10.1212/WNL.0000000000001280. Epub 2015 Jan 23.

PMID:
25616485
[PubMed - in process]
Free PMC Article
3.

Computational approaches to developing short cyclic peptide modulators of protein-protein interactions.

Duffy FJ, Devocelle M, Shields DC.

Methods Mol Biol. 2015;1268:241-71. doi: 10.1007/978-1-4939-2285-7_11.

PMID:
25555728
[PubMed - in process]
4.

Following the digestion of milk proteins from mother to baby.

Holton TA, Vijayakumar V, Dallas DC, Guerrero A, Borghese RA, Lebrilla CB, German JB, Barile D, Underwood MA, Shields DC, Khaldi N.

J Proteome Res. 2014 Dec 5;13(12):5777-83. doi: 10.1021/pr5006907. Epub 2014 Nov 11.

PMID:
25385259
[PubMed - in process]
Free PMC Article
5.

Pharmacogenetic meta-analysis of genome-wide association studies of LDL cholesterol response to statins.

Postmus I, Trompet S, Deshmukh HA, Barnes MR, Li X, Warren HR, Chasman DI, Zhou K, Arsenault BJ, Donnelly LA, Wiggins KL, Avery CL, Griffin P, Feng Q, Taylor KD, Li G, Evans DS, Smith AV, de Keyser CE, Johnson AD, de Craen AJ, Stott DJ, Buckley BM, Ford I, Westendorp RG, Slagboom PE, Sattar N, Munroe PB, Sever P, Poulter N, Stanton A, Shields DC, O'Brien E, Shaw-Hawkins S, Chen YD, Nickerson DA, Smith JD, Dubé MP, Boekholdt SM, Hovingh GK, Kastelein JJ, McKeigue PM, Betteridge J, Neil A, Durrington PN, Doney A, Carr F, Morris A, McCarthy MI, Groop L, Ahlqvist E; Welcome Trust Case Control Consortium, Bis JC, Rice K, Smith NL, Lumley T, Whitsel EA, Stürmer T, Boerwinkle E, Ngwa JS, O'Donnell CJ, Vasan RS, Wei WQ, Wilke RA, Liu CT, Sun F, Guo X, Heckbert SR, Post W, Sotoodehnia N, Arnold AM, Stafford JM, Ding J, Herrington DM, Kritchevsky SB, Eiriksdottir G, Launer LJ, Harris TB, Chu AY, Giulianini F, MacFadyen JG, Barratt BJ, Nyberg F, Stricker BH, Uitterlinden AG, Hofman A, Rivadeneira F, Emilsson V, Franco OH, Ridker PM, Gudnason V, Liu Y, Denny JC, Ballantyne CM, Rotter JI, Adrienne Cupples L, Psaty BM, Palmer CN, Tardif JC, Colhoun HM, Hitman G, Krauss RM, Wouter Jukema J, Caulfield MJ.

Nat Commun. 2014 Oct 28;5:5068. doi: 10.1038/ncomms6068.

PMID:
25350695
[PubMed - in process]
Free PMC Article
6.

Computational survey of peptides derived from disulphide-bonded protein loops that may serve as mediators of protein-protein interactions.

Duffy FJ, Devocelle M, Croucher DR, Shields DC.

BMC Bioinformatics. 2014 Sep 17;15:305. doi: 10.1186/1471-2105-15-305.

PMID:
25231912
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Cadherin juxtamembrane region derived peptides inhibit TGFβ1 induced gene expression.

Stavropoulos I, Golla K, Moran N, Martin F, Shields DC.

Bioarchitecture. 2014 May-Jun;4(3):103-10. doi: 10.4161/bioa.32143. Epub 2014 Aug 9.

PMID:
25108297
[PubMed - in process]
8.

In silico approaches to predict the potential of milk protein-derived peptides as dipeptidyl peptidase IV (DPP-IV) inhibitors.

Nongonierma AB, Mooney C, Shields DC, FitzGerald RJ.

Peptides. 2014 Jul;57:43-51. doi: 10.1016/j.peptides.2014.04.018. Epub 2014 May 2.

PMID:
24793774
[PubMed - indexed for MEDLINE]
9.

Reward and reinforcement activity in the nucleus accumbens during learning.

Gale JT, Shields DC, Ishizawa Y, Eskandar EN.

Front Behav Neurosci. 2014 Apr 3;8:114. doi: 10.3389/fnbeh.2014.00114. eCollection 2014.

PMID:
24765069
[PubMed]
Free PMC Article
10.

Predicting the important enzymes in human breast milk digestion.

Khaldi N, Vijayakumar V, Dallas DC, Guerrero A, Wickramasinghe S, Smilowitz JT, Medrano JF, Lebrilla CB, Shields DC, German JB.

J Agric Food Chem. 2014 Jul 23;62(29):7225-32. doi: 10.1021/jf405601e. Epub 2014 Jul 10.

PMID:
24620897
[PubMed - in process]
Free PMC Article
11.

Potential of known and short prokaryotic protein motifs as a basis for novel peptide-based antibacterial therapeutics: a computational survey.

Ruhanen H, Hurley D, Ghosh A, O'Brien KT, Johnston CR, Shields DC.

Front Microbiol. 2014 Jan 21;5:4. doi: 10.3389/fmicb.2014.00004. eCollection 2014.

PMID:
24478765
[PubMed]
Free PMC Article
12.

Amino acid enrichment and compositional changes among mammalian milk proteins and the resulting nutritional consequences.

Khaldi N, Holton TA, Shields DC.

J Dairy Sci. 2014 Mar;97(3):1248-58. doi: 10.3168/jds.2013-7317. Epub 2014 Jan 25.

PMID:
24472131
[PubMed - in process]
13.

A historical perspective: stereotactic lesions for the treatment of epilepsy.

Leiphart JW, Young RM, Shields DC.

Seizure. 2014 Jan;23(1):1-5. doi: 10.1016/j.seizure.2013.10.006. Epub 2013 Oct 19. Review.

PMID:
24216485
[PubMed - indexed for MEDLINE]
Free Article
14.

CPPpred: prediction of cell penetrating peptides.

Holton TA, Pollastri G, Shields DC, Mooney C.

Bioinformatics. 2013 Dec 1;29(23):3094-6. doi: 10.1093/bioinformatics/btt518. Epub 2013 Sep 23.

PMID:
24064418
[PubMed - indexed for MEDLINE]
Free Article
15.

Predicting binding within disordered protein regions to structurally characterised peptide-binding domains.

Khan W, Duffy F, Pollastri G, Shields DC, Mooney C.

PLoS One. 2013 Sep 3;8(9):e72838. doi: 10.1371/journal.pone.0072838. eCollection 2013.

PMID:
24019881
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Genome-wide analysis of blood pressure variability and ischemic stroke.

Yadav S, Cotlarciuc I, Munroe PB, Khan MS, Nalls MA, Bevan S, Cheng YC, Chen WM, Malik R, McCarthy NS, Holliday EG, Speed D, Hasan N, Pucek M, Rinne PE, Sever P, Stanton A, Shields DC, Maguire JM, McEvoy M, Scott RJ, Ferrucci L, Macleod MJ, Attia J, Markus HS, Sale MM, Worrall BB, Mitchell BD, Dichgans M, Sudlow C, Meschia JF, Rothwell PM, Caulfield M, Sharma P; International Stroke Genetics Consortium.

Stroke. 2013 Oct;44(10):2703-9. doi: 10.1161/STROKEAHA.113.002186. Epub 2013 Aug 8.

PMID:
23929743
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Critical role of calpain in spinal cord degeneration in Parkinson's disease.

Samantaray S, Knaryan VH, Shields DC, Banik NL.

J Neurochem. 2013 Dec;127(6):880-90. doi: 10.1111/jnc.12374. Epub 2013 Aug 20.

PMID:
23875735
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

SLiMScape: a protein short linear motif analysis plugin for Cytoscape.

O'Brien KT, Haslam NJ, Shields DC.

BMC Bioinformatics. 2013 Jul 15;14:224. doi: 10.1186/1471-2105-14-224.

PMID:
23855714
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Inhibition of dipeptidyl peptidase IV and xanthine oxidase by amino acids and dipeptides.

Nongonierma AB, Mooney C, Shields DC, Fitzgerald RJ.

Food Chem. 2013 Nov 1;141(1):644-53. doi: 10.1016/j.foodchem.2013.02.115. Epub 2013 Mar 7.

PMID:
23768405
[PubMed - indexed for MEDLINE]
20.

Marked variability in the extent of protein disorder within and between viral families.

Pushker R, Mooney C, Davey NE, Jacqué JM, Shields DC.

PLoS One. 2013 Apr 19;8(4):e60724. doi: 10.1371/journal.pone.0060724. Print 2013.

PMID:
23620725
[PubMed - indexed for MEDLINE]
Free PMC Article
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