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Results: 18

1.

Comments on the distribution and phylogeny of type I polyketide synthases and nonribosomal peptide synthetases in eukaryotes.

Sasso S, Shelest E, Hoffmeister D.

Proc Natl Acad Sci U S A. 2014 Sep 23;111(38):E3946. doi: 10.1073/pnas.1412766111. Epub 2014 Sep 2. No abstract available.

PMID:
25197098
[PubMed - in process]
2.

Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial mucorales (Mucoromycotina).

Schwartze VU, Winter S, Shelest E, Marcet-Houben M, Horn F, Wehner S, Linde J, Valiante V, Sammeth M, Riege K, Nowrousian M, Kaerger K, Jacobsen ID, Marz M, Brakhage AA, Gabaldón T, Böcker S, Voigt K.

PLoS Genet. 2014 Aug 14;10(8):e1004496. doi: 10.1371/journal.pgen.1004496. eCollection 2014 Aug.

PMID:
25121733
[PubMed - in process]
Free PMC Article
3.

Terrein biosynthesis in Aspergillus terreus and its impact on phytotoxicity.

Zaehle C, Gressler M, Shelest E, Geib E, Hertweck C, Brock M.

Chem Biol. 2014 Jun 19;21(6):719-31. doi: 10.1016/j.chembiol.2014.03.010. Epub 2014 May 8.

PMID:
24816227
[PubMed - in process]
4.

The fungal α-aminoadipate pathway for lysine biosynthesis requires two enzymes of the aconitase family for the isomerization of homocitrate to homoisocitrate.

Fazius F, Shelest E, Gebhardt P, Brock M.

Mol Microbiol. 2012 Dec;86(6):1508-30. doi: 10.1111/mmi.12076. Epub 2012 Nov 6.

PMID:
23106124
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Evolutionary imprint of catalytic domains in fungal PKS-NRPS hybrids.

Boettger D, Bergmann H, Kuehn B, Shelest E, Hertweck C.

Chembiochem. 2012 Nov 5;13(16):2363-73. doi: 10.1002/cbic.201200449. Epub 2012 Sep 28.

PMID:
23023987
[PubMed - indexed for MEDLINE]
6.

Breaking the silence: protein stabilization uncovers silenced biosynthetic gene clusters in the fungus Aspergillus nidulans.

Gerke J, Bayram O, Feussner K, Landesfeind M, Shelest E, Feussner I, Braus GH.

Appl Environ Microbiol. 2012 Dec;78(23):8234-44. doi: 10.1128/AEM.01808-12. Epub 2012 Sep 21.

PMID:
23001671
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Comparative genome analysis of Trichophyton rubrum and related dermatophytes reveals candidate genes involved in infection.

Martinez DA, Oliver BG, Gräser Y, Goldberg JM, Li W, Martinez-Rossi NM, Monod M, Shelest E, Barton RC, Birch E, Brakhage AA, Chen Z, Gurr SJ, Heiman D, Heitman J, Kosti I, Rossi A, Saif S, Samalova M, Saunders CW, Shea T, Summerbell RC, Xu J, Young S, Zeng Q, Birren BW, Cuomo CA, White TC.

MBio. 2012 Sep 4;3(5):e00259-12. doi: 10.1128/mBio.00259-12. Print 2012.

PMID:
22951933
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Novel traits of Trichoderma predicted through the analysis of its secretome.

Druzhinina IS, Shelest E, Kubicek CP.

FEMS Microbiol Lett. 2012 Dec;337(1):1-9. doi: 10.1111/j.1574-6968.2012.02665.x. Epub 2012 Sep 18. Review.

PMID:
22924408
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

SiTaR: a novel tool for transcription factor binding site prediction.

Fazius E, Shelest V, Shelest E.

Bioinformatics. 2011 Oct 15;27(20):2806-11. doi: 10.1093/bioinformatics/btr492. Epub 2011 Sep 4.

PMID:
21893518
[PubMed - indexed for MEDLINE]
Free Article
10.

Comparative and functional genomics provide insights into the pathogenicity of dermatophytic fungi.

Burmester A, Shelest E, Glöckner G, Heddergott C, Schindler S, Staib P, Heidel A, Felder M, Petzold A, Szafranski K, Feuermann M, Pedruzzi I, Priebe S, Groth M, Winkler R, Li W, Kniemeyer O, Schroeckh V, Hertweck C, Hube B, White TC, Platzer M, Guthke R, Heitman J, Wöstemeyer J, Zipfel PF, Monod M, Brakhage AA.

Genome Biol. 2011;12(1):R7. doi: 10.1186/gb-2011-12-1-r7. Epub 2011 Jan 19.

PMID:
21247460
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Activation of a silent fungal polyketide biosynthesis pathway through regulatory cross talk with a cryptic nonribosomal peptide synthetase gene cluster.

Bergmann S, Funk AN, Scherlach K, Schroeckh V, Shelest E, Horn U, Hertweck C, Brakhage AA.

Appl Environ Microbiol. 2010 Dec;76(24):8143-9. doi: 10.1128/AEM.00683-10. Epub 2010 Oct 15.

PMID:
20952652
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

DistanceScan: a tool for promoter modeling.

Shelest V, Albrecht D, Shelest E.

Bioinformatics. 2010 Jun 1;26(11):1460-2. doi: 10.1093/bioinformatics/btq132. Epub 2010 Mar 25.

PMID:
20360058
[PubMed - indexed for MEDLINE]
Free Article
13.

Intimate bacterial-fungal interaction triggers biosynthesis of archetypal polyketides in Aspergillus nidulans.

Schroeckh V, Scherlach K, Nützmann HW, Shelest E, Schmidt-Heck W, Schuemann J, Martin K, Hertweck C, Brakhage AA.

Proc Natl Acad Sci U S A. 2009 Aug 25;106(34):14558-63. doi: 10.1073/pnas.0901870106. Epub 2009 Aug 6.

PMID:
19666480
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Identification of the novel penicillin biosynthesis gene aatB of Aspergillus nidulans and its putative evolutionary relationship to this fungal secondary metabolism gene cluster.

Spröte P, Hynes MJ, Hortschansky P, Shelest E, Scharf DH, Wolke SM, Brakhage AA.

Mol Microbiol. 2008 Oct;70(2):445-61.

PMID:
18942174
[PubMed - indexed for MEDLINE]
15.

Transcription factors in fungi.

Shelest E.

FEMS Microbiol Lett. 2008 Sep;286(2):145-51. doi: 10.1111/j.1574-6968.2008.01293.x. Review.

PMID:
18789126
[PubMed - indexed for MEDLINE]
16.

Evaluating phylogenetic footprinting for human-rodent comparisons.

Sauer T, Shelest E, Wingender E.

Bioinformatics. 2006 Feb 15;22(4):430-7. Epub 2005 Dec 6.

PMID:
16332706
[PubMed - indexed for MEDLINE]
Free Article
17.

Construction of predictive promoter models on the example of antibacterial response of human epithelial cells.

Shelest E, Wingender E.

Theor Biol Med Model. 2005 Jan 12;2:2.

PMID:
15647113
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Prediction of potential C/EBP/NF-kappaB composite elements using matrix-based search methods.

Shelest E, Kel AE, Göessling E, Wingender E.

In Silico Biol. 2003;3(1-2):71-9. Epub 2002 Dec 8.

PMID:
12762847
[PubMed - indexed for MEDLINE]

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