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Gene discovery by chemical mutagenesis and whole-genome sequencing in Dictyostelium.

Li CF, Santhanam B, Webb AN, Zupan B, Shaulsky G.

Genome Res. 2016 Jun 15. pii: gr.205682.116. [Epub ahead of print]


The GATA transcription factor gene gtaG is required for terminal differentiation in Dictyostelium.

Katoh-Kurasawa M, Santhanam B, Shaulsky G.

J Cell Sci. 2016 Mar 9. pii: jcs.181545. [Epub ahead of print]


Gene Prioritization by Compressive Data Fusion and Chaining.

Žitnik M, Nam EA, Dinh C, Kuspa A, Shaulsky G, Zupan B.

PLoS Comput Biol. 2015 Oct 14;11(10):e1004552. doi: 10.1371/journal.pcbi.1004552. eCollection 2015 Oct.


Allorecognition, via TgrB1 and TgrC1, mediates the transition from unicellularity to multicellularity in the social amoeba Dictyostelium discoideum.

Hirose S, Santhanam B, Katoh-Kurosawa M, Shaulsky G, Kuspa A.

Development. 2015 Oct 15;142(20):3561-70. doi: 10.1242/dev.123281. Epub 2015 Sep 22.


Altered N-glycosylation modulates TgrB1- and TgrC1-mediated development but not allorecognition in Dictyostelium.

Li CL, Chen G, Webb AN, Shaulsky G.

J Cell Sci. 2015 Nov 1;128(21):3990-6. doi: 10.1242/jcs.172882. Epub 2015 Sep 10.


The GATA transcription factor GtaC regulates early developmental gene expression dynamics in Dictyostelium.

Santhanam B, Cai H, Devreotes PN, Shaulsky G, Katoh-Kurasawa M.

Nat Commun. 2015 Jul 6;6:7551. doi: 10.1038/ncomms8551.


Genomic signatures of cooperation and conflict in the social amoeba.

Ostrowski EA, Shen Y, Tian X, Sucgang R, Jiang H, Qu J, Katoh-Kurasawa M, Brock DA, Dinh C, Lara-Garduno F, Lee SL, Kovar CL, Dinh HH, Korchina V, Jackson L, Patil S, Han Y, Chaboub L, Shaulsky G, Muzny DM, Worley KC, Gibbs RA, Richards S, Kuspa A, Strassmann JE, Queller DC.

Curr Biol. 2015 Jun 15;25(12):1661-5. doi: 10.1016/j.cub.2015.04.059. Epub 2015 Jun 4.


A deep coverage Dictyostelium discoideum genomic DNA library replicates stably in Escherichia coli.

Rosengarten RD, Beltran PR, Shaulsky G.

Genomics. 2015 Oct;106(4):249-55. doi: 10.1016/j.ygeno.2015.05.008. Epub 2015 May 29.


Temporal regulation of kin recognition maintains recognition-cue diversity and suppresses cheating.

Ho HI, Shaulsky G.

Nat Commun. 2015 May 28;6:7144. doi: 10.1038/ncomms8144.


TgrC1 Has Distinct Functions in Dictyostelium Development and Allorecognition.

Wang Y, Shaulsky G.

PLoS One. 2015 Apr 20;10(4):e0124270. doi: 10.1371/journal.pone.0124270. eCollection 2015.


Leaps and lulls in the developmental transcriptome of Dictyostelium discoideum.

Rosengarten RD, Santhanam B, Fuller D, Katoh-Kurasawa M, Loomis WF, Zupan B, Shaulsky G.

BMC Genomics. 2015 Apr 13;16:294. doi: 10.1186/s12864-015-1491-7.


The ABC transporter, AbcB3, mediates cAMP export in D. discoideum development.

Miranda ER, Nam EA, Kuspa A, Shaulsky G.

Dev Biol. 2015 Jan 15;397(2):203-11. doi: 10.1016/j.ydbio.2014.11.006. Epub 2014 Nov 20.


Determination and inference of eukaryotic transcription factor sequence specificity.

Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, Walhout AJ, Bouget FY, Ratsch G, Larrondo LF, Ecker JR, Hughes TR.

Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009.


Nucleocytoplasmic shuttling of a GATA transcription factor functions as a development timer.

Cai H, Katoh-Kurasawa M, Muramoto T, Santhanam B, Long Y, Li L, Ueda M, Iglesias PA, Shaulsky G, Devreotes PN.

Science. 2014 Mar 21;343(6177):1249531. doi: 10.1126/science.1249531.


ABC transporters in Dictyostelium discoideum development.

Miranda ER, Zhuchenko O, Toplak M, Santhanam B, Zupan B, Kuspa A, Shaulsky G.

PLoS One. 2013 Aug 14;8(8):e70040. doi: 10.1371/journal.pone.0070040. eCollection 2013.


Kin recognition protects cooperators against cheaters.

Ho HI, Hirose S, Kuspa A, Shaulsky G.

Curr Biol. 2013 Aug 19;23(16):1590-5. doi: 10.1016/j.cub.2013.06.049. Epub 2013 Aug 1.


Bacterial discrimination by dictyostelid amoebae reveals the complexity of ancient interspecies interactions.

Nasser W, Santhanam B, Miranda ER, Parikh A, Juneja K, Rot G, Dinh C, Chen R, Zupan B, Shaulsky G, Kuspa A.

Curr Biol. 2013 May 20;23(10):862-72. doi: 10.1016/j.cub.2013.04.034. Epub 2013 May 9.


Transcriptional profiling of Dictyostelium with RNA sequencing.

Miranda ER, Rot G, Toplak M, Santhanam B, Curk T, Shaulsky G, Zupan B.

Methods Mol Biol. 2013;983:139-71. doi: 10.1007/978-1-62703-302-2_8.


A new social gene in Dictyostelium discoideum, chtB.

Santorelli LA, Kuspa A, Shaulsky G, Queller DC, Strassmann JE.

BMC Evol Biol. 2013 Jan 9;13:4. doi: 10.1186/1471-2148-13-4.


BzpF is a CREB-like transcription factor that regulates spore maturation and stability in Dictyostelium.

Huang E, Talukder S, Hughes TR, Curk T, Zupan B, Shaulsky G, Katoh-Kurasawa M.

Dev Biol. 2011 Oct 1;358(1):137-46. doi: 10.1016/j.ydbio.2011.07.017. Epub 2011 Jul 23.

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