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Systematic identification and correction of annotation errors in the genetic interaction map of Saccharomyces cerevisiae.

Atias N, Kupiec M, Sharan R.

Nucleic Acids Res. 2015 Nov 23. pii: gkv1284. [Epub ahead of print]


Proteomic analysis of dynein-interacting proteins in Amyotrophic Lateral Sclerosis synaptosomes reveals alterations in the RNA-binding Protein Staufen1.

Gershoni-Emek N, Mazza A, Chein M, Gradus-Pery T, Xiang X, Li KW, Sharan R, Perlson E.

Mol Cell Proteomics. 2015 Nov 23. pii: mcp.M115.049965. [Epub ahead of print]


Comparative evaluation of 0.75% ropivacaine with clonidine and 0.5% bupivacaine with clonidine in infraclavicular brachial plexus block.

Chatrath V, Sharan R, Kheterpal R, Kaur G, Ahuja J, Attri JP.

Anesth Essays Res. 2015 May-Aug;9(2):189-94. doi: 10.4103/0259-1162.153758.


Consensus reference gene(s) for gene expression studies in human cancers: end of the tunnel visible?

Sharan RN, Vaiphei ST, Nongrum S, Keppen J, Ksoo M.

Cell Oncol (Dordr). 2015 Dec;38(6):419-31. doi: 10.1007/s13402-015-0244-6. Epub 2015 Sep 18.


Human protein interaction networks across tissues and diseases.

Yeger-Lotem E, Sharan R.

Front Genet. 2015 Aug 19;6:257. doi: 10.3389/fgene.2015.00257. eCollection 2015. Review.


Introduction. These two issues contain a selected subset of the papers presented at RECOMB 2014.

Sharan R.

J Comput Biol. 2015 May;22(5):335. doi: 10.1089/cmb.2015.030P. No abstract available.


Comparative evaluation of oral flupirtine and oral diclofenac sodium for analgesia and adverse effects in elective abdominal surgeries.

Attri JP, Sandhu GK, Khichy S, Singh H, Singh K, Sharan R.

Anesth Essays Res. 2015 Jan-Apr;9(1):72-8. doi: 10.4103/0259-1162.150681.


Regulation of Sec16 levels and dynamics links proliferation and secretion.

Tillmann KD, Reiterer V, Baschieri F, Hoffmann J, Millarte V, Hauser MA, Mazza A, Atias N, Legler DF, Sharan R, Weiss M, Farhan H.

J Cell Sci. 2015 Feb 15;128(4):670-82. doi: 10.1242/jcs.157115. Epub 2014 Dec 19.


The effects of telomere shortening on cancer cells: a network model of proteomic and microRNA analysis.

Uziel O, Yosef N, Sharan R, Ruppin E, Kupiec M, Kushnir M, Beery E, Cohen-Diker T, Nordenberg J, Lahav M.

Genomics. 2015 Jan;105(1):5-16. doi: 10.1016/j.ygeno.2014.10.013. Epub 2014 Nov 13.


Evaluation of endogenous control gene(s) for gene expression studies in human blood exposed to 60Co γ-rays ex vivo.

Vaiphei ST, Keppen J, Nongrum S, Chaubey RC, Kma L, Sharan RN.

J Radiat Res. 2015 Jan;56(1):177-85. doi: 10.1093/jrr/rru074. Epub 2014 Sep 30.


Experimental design schemes for learning Boolean network models.

Atias N, Gershenzon M, Labazin K, Sharan R.

Bioinformatics. 2014 Sep 1;30(17):i445-52. doi: 10.1093/bioinformatics/btu451.


Anxiety in school students: Role of parenting and gender.

Bakhla AK, Sinha P, Sharan R, Binay Y, Verma V, Chaudhury S.

Ind Psychiatry J. 2013 Jul;22(2):131-7. doi: 10.4103/0972-6748.132927.


Multivalent antiviral XTEN-peptide conjugates with long in vivo half-life and enhanced solubility.

Ding S, Song M, Sim BC, Gu C, Podust VN, Wang CW, McLaughlin B, Shah TP, Lax R, Gast R, Sharan R, Vasek A, Hartman MA, Deniston C, Srinivas P, Schellenberger V.

Bioconjug Chem. 2014 Jul 16;25(7):1351-9. doi: 10.1021/bc500215m. Epub 2014 Jun 23.


A method for predicting protein-protein interaction types.

Silberberg Y, Kupiec M, Sharan R.

PLoS One. 2014 Mar 13;9(3):e90904. doi: 10.1371/journal.pone.0090904. eCollection 2014.


Modelling the yeast interactome.

Janjić V, Sharan R, Pržulj N.

Sci Rep. 2014 Mar 4;4:4273. doi: 10.1038/srep04273.


A minimum-labeling approach for reconstructing protein networks across multiple conditions.

Mazza A, Gat-Viks I, Farhan H, Sharan R.

Algorithms Mol Biol. 2014 Feb 9;9(1):1. doi: 10.1186/1748-7188-9-1.


Network orientation via shortest paths.

Silverbush D, Sharan R.

Bioinformatics. 2014 May 15;30(10):1449-55. doi: 10.1093/bioinformatics/btu043. Epub 2014 Jan 27.


Elucidating influenza inhibition pathways via network reconstruction.

Mazza A, Gat-Viks I, Sharan R.

J Comput Biol. 2014 May;21(5):394-404. doi: 10.1089/cmb.2013.0147. Epub 2014 Jan 22.

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