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Items: 1 to 20 of 32

1.

MHC diversity is positively associated with stream water temperatures in proximate populations of sockeye salmon.

Larson WA, Lisi PJ, Seeb JE, Seeb LW, Schindler DE.

J Evol Biol. 2016 Jun 24. doi: 10.1111/jeb.12926. [Epub ahead of print]

PMID:
27341174
2.

Sorting duplicated loci disentangles complexities of polyploid genomes masked by genotyping by sequencing.

Limborg MT, Seeb LW, Seeb JE.

Mol Ecol. 2016 May;25(10):2117-29. doi: 10.1111/mec.13601. Epub 2016 Apr 20.

PMID:
26939067
3.

Identification of Multiple QTL Hotspots in Sockeye Salmon (Oncorhynchus nerka) Using Genotyping-by-Sequencing and a Dense Linkage Map.

Larson WA, McKinney GJ, Limborg MT, Everett MV, Seeb LW, Seeb JE.

J Hered. 2016 Mar;107(2):122-33. doi: 10.1093/jhered/esv099. Epub 2015 Dec 28.

PMID:
26712859
4.

Recombination patterns reveal information about centromere location on linkage maps.

Limborg MT, McKinney GJ, Seeb LW, Seeb JE.

Mol Ecol Resour. 2016 May;16(3):655-61. doi: 10.1111/1755-0998.12484. Epub 2015 Dec 6.

PMID:
26561199
5.

Temporal Genetic Variance and Propagule-Driven Genetic Structure Characterize Naturalized Rainbow Trout (Oncorhynchus mykiss) from a Patagonian Lake Impacted by Trout Farming.

Benavente JN, Seeb LW, Seeb JE, Arismendi I, Hernández CE, Gajardo G, Galleguillos R, Cádiz MI, Musleh SS, Gomez-Uchida D.

PLoS One. 2015 Nov 6;10(11):e0142040. doi: 10.1371/journal.pone.0142040. eCollection 2015.

6.

An integrated linkage map reveals candidate genes underlying adaptive variation in Chinook salmon (Oncorhynchus tshawytscha).

McKinney GJ, Seeb LW, Larson WA, Gomez-Uchida D, Limborg MT, Brieuc MS, Everett MV, Naish KA, Waples RK, Seeb JE.

Mol Ecol Resour. 2016 May;16(3):769-83. doi: 10.1111/1755-0998.12479. Epub 2015 Nov 25.

PMID:
26490135
7.

Response to May and Delany: We Never Said Wright was Wrong.

Allendorf FW, Bassham S, Cresko WA, Limborg MT, Seeb LW, Seeb JE.

J Hered. 2015 Nov-Dec;106(6):767-8. doi: 10.1093/jhered/esv072. Epub 2015 Aug 29. No abstract available.

PMID:
26320245
8.

Effects of crossovers between homeologs on inheritance and population genomics in polyploid-derived salmonid fishes.

Allendorf FW, Bassham S, Cresko WA, Limborg MT, Seeb LW, Seeb JE.

J Hered. 2015 May-Jun;106(3):217-27. doi: 10.1093/jhered/esv015. Epub 2015 Apr 2. Review.

9.

Linkage mapping with paralogs exposes regions of residual tetrasomic inheritance in chum salmon (Oncorhynchus keta).

Waples RK, Seeb LW, Seeb JE.

Mol Ecol Resour. 2016 Jan;16(1):17-28. doi: 10.1111/1755-0998.12394. Epub 2015 Mar 11.

PMID:
25712438
10.

Temporally isolated lineages of pink salmon reveal unique signatures of selection on distinct pools of standing genetic variation.

Limborg MT, Waples RK, Seeb JE, Seeb LW.

J Hered. 2014 Nov-Dec;105(6):741-51. doi: 10.1093/jhered/esu063. Epub 2014 Oct 6. Erratum in: J Hered. 2015 Nov-Dec;106(6):769.

11.

Signals of heterogeneous selection at an MHC locus in geographically proximate ecotypes of sockeye salmon.

Larson WA, Seeb JE, Dann TH, Schindler DE, Seeb LW.

Mol Ecol. 2014 Nov;23(22):5448-61. doi: 10.1111/mec.12949. Epub 2014 Nov 5.

PMID:
25283474
12.

Parallel signatures of selection in temporally isolated lineages of pink salmon.

Seeb LW, Waples RK, Limborg MT, Warheit KI, Pascal CE, Seeb JE.

Mol Ecol. 2014 May;23(10):2473-85. doi: 10.1111/mec.12769.

PMID:
24762204
13.

Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon (Oncorhynchus tshawytscha).

Larson WA, Seeb LW, Everett MV, Waples RK, Templin WD, Seeb JE.

Evol Appl. 2014 Mar;7(3):355-69. doi: 10.1111/eva.12128. Epub 2014 Jan 2.

14.

Secondary contact and changes in coastal habitat availability influence the nonequilibrium population structure of a salmonid (Oncorhynchus keta).

Petrou EL, Hauser L, Waples RS, Seeb JE, Templin WD, Gomez-Uchida D, Seeb LW.

Mol Ecol. 2013 Dec;22(23):5848-60. doi: 10.1111/mec.12543. Epub 2013 Nov 8.

15.

How stock of origin affects performance of individuals across a meta-ecosystem: an example from sockeye salmon.

Griffiths JR, Schindler DE, Seeb LW.

PLoS One. 2013;8(3):e58584. doi: 10.1371/journal.pone.0058584. Epub 2013 Mar 7.

16.

Rank and order: evaluating the performance of SNPs for individual assignment in a non-model organism.

Storer CG, Pascal CE, Roberts SB, Templin WD, Seeb LW, Seeb JE.

PLoS One. 2012;7(11):e49018. doi: 10.1371/journal.pone.0049018. Epub 2012 Nov 20.

17.

Signatures of natural selection among lineages and habitats in Oncorhynchus mykiss.

Limborg MT, Blankenship SM, Young SF, Utter FM, Seeb LW, Hansen MH, Seeb JE.

Ecol Evol. 2012 Jan;2(1):1-18. doi: 10.1002/ece3.59.

18.

Development of genomic resources for Pacific Herring through targeted transcriptome pyrosequencing.

Roberts SB, Hauser L, Seeb LW, Seeb JE.

PLoS One. 2012;7(2):e30908. doi: 10.1371/journal.pone.0030908. Epub 2012 Feb 27.

19.

Multiplex preamplification PCR and microsatellite validation enables accurate single nucleotide polymorphism genotyping of historical fish scales.

Smith MJ, Pascal CE, Grauvogel Z, Habicht C, Seeb JE, Seeb LW.

Mol Ecol Resour. 2011 Mar;11 Suppl 1:268-77. doi: 10.1111/j.1755-0998.2010.02965.x.

PMID:
21429180
20.

Genetic differentiation of Alaska Chinook salmon: the missing link for migratory studies.

Templin WD, Seeb JE, Jasper JR, Barclay AW, Seeb LW.

Mol Ecol Resour. 2011 Mar;11 Suppl 1:226-46. doi: 10.1111/j.1755-0998.2010.02968.x.

PMID:
21429177
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