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Results: 1 to 20 of 24

1.

Linkage mapping with paralogs exposes regions of residual tetrasomic inheritance in chum salmon (Oncorhynchus keta).

Waples RK, Seeb LW, Seeb JE.

Mol Ecol Resour. 2015 Feb 25. doi: 10.1111/1755-0998.12394. [Epub ahead of print]

PMID:
25712438
2.

Temporally isolated lineages of pink salmon reveal unique signatures of selection on distinct pools of standing genetic variation.

Limborg MT, Waples RK, Seeb JE, Seeb LW.

J Hered. 2014 Nov-Dec;105(6):741-51. doi: 10.1093/jhered/esu063. Epub 2014 Oct 6.

PMID:
25292170
3.

Signals of heterogeneous selection at an MHC locus in geographically proximate ecotypes of sockeye salmon.

Larson WA, Seeb JE, Dann TH, Schindler DE, Seeb LW.

Mol Ecol. 2014 Nov;23(22):5448-61. doi: 10.1111/mec.12949. Epub 2014 Nov 5.

PMID:
25283474
4.

Parallel signatures of selection in temporally isolated lineages of pink salmon.

Seeb LW, Waples RK, Limborg MT, Warheit KI, Pascal CE, Seeb JE.

Mol Ecol. 2014 May;23(10):2473-85. doi: 10.1111/mec.12769.

PMID:
24762204
5.

Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon (Oncorhynchus tshawytscha).

Larson WA, Seeb LW, Everett MV, Waples RK, Templin WD, Seeb JE.

Evol Appl. 2014 Mar;7(3):355-69. doi: 10.1111/eva.12128. Epub 2014 Jan 2.

6.

Secondary contact and changes in coastal habitat availability influence the nonequilibrium population structure of a salmonid (Oncorhynchus keta).

Petrou EL, Hauser L, Waples RS, Seeb JE, Templin WD, Gomez-Uchida D, Seeb LW.

Mol Ecol. 2013 Dec;22(23):5848-60. doi: 10.1111/mec.12543. Epub 2013 Nov 8.

7.

How stock of origin affects performance of individuals across a meta-ecosystem: an example from sockeye salmon.

Griffiths JR, Schindler DE, Seeb LW.

PLoS One. 2013;8(3):e58584. doi: 10.1371/journal.pone.0058584. Epub 2013 Mar 7.

8.

Rank and order: evaluating the performance of SNPs for individual assignment in a non-model organism.

Storer CG, Pascal CE, Roberts SB, Templin WD, Seeb LW, Seeb JE.

PLoS One. 2012;7(11):e49018. doi: 10.1371/journal.pone.0049018. Epub 2012 Nov 20.

9.

Signatures of natural selection among lineages and habitats in Oncorhynchus mykiss.

Limborg MT, Blankenship SM, Young SF, Utter FM, Seeb LW, Hansen MH, Seeb JE.

Ecol Evol. 2012 Jan;2(1):1-18. doi: 10.1002/ece3.59.

10.

Development of genomic resources for Pacific Herring through targeted transcriptome pyrosequencing.

Roberts SB, Hauser L, Seeb LW, Seeb JE.

PLoS One. 2012;7(2):e30908. doi: 10.1371/journal.pone.0030908. Epub 2012 Feb 27.

11.

Multiplex preamplification PCR and microsatellite validation enables accurate single nucleotide polymorphism genotyping of historical fish scales.

Smith MJ, Pascal CE, Grauvogel Z, Habicht C, Seeb JE, Seeb LW.

Mol Ecol Resour. 2011 Mar;11 Suppl 1:268-77. doi: 10.1111/j.1755-0998.2010.02965.x.

PMID:
21429180
12.

Genetic differentiation of Alaska Chinook salmon: the missing link for migratory studies.

Templin WD, Seeb JE, Jasper JR, Barclay AW, Seeb LW.

Mol Ecol Resour. 2011 Mar;11 Suppl 1:226-46. doi: 10.1111/j.1755-0998.2010.02968.x.

PMID:
21429177
13.

Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon.

Seeb LW, Templin WD, Sato S, Abe S, Warheit K, Park JY, Seeb JE.

Mol Ecol Resour. 2011 Mar;11 Suppl 1:195-217. doi: 10.1111/j.1755-0998.2010.02966.x.

PMID:
21429175
14.

An empirical comparison of SNPs and microsatellites for parentage and kinship assignment in a wild sockeye salmon (Oncorhynchus nerka) population.

Hauser L, Baird M, Hilborn R, Seeb LW, Seeb JE.

Mol Ecol Resour. 2011 Mar;11 Suppl 1:150-61. doi: 10.1111/j.1755-0998.2010.02961.x.

PMID:
21429171
15.

Single-nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms.

Seeb JE, Carvalho G, Hauser L, Naish K, Roberts S, Seeb LW.

Mol Ecol Resour. 2011 Mar;11 Suppl 1:1-8. doi: 10.1111/j.1755-0998.2010.02979.x. No abstract available.

PMID:
21429158
16.

Transcriptome sequencing and high-resolution melt analysis advance single nucleotide polymorphism discovery in duplicated salmonids.

Seeb JE, Pascal CE, Grau ED, Seeb LW, Templin WD, Harkins T, Roberts SB.

Mol Ecol Resour. 2011 Mar;11(2):335-48. doi: 10.1111/j.1755-0998.2010.02936.x. Epub 2010 Nov 24.

PMID:
21429141
17.

Single nucleotide polymorphisms unravel hierarchical divergence and signatures of selection among Alaskan sockeye salmon (Oncorhynchus nerka) populations.

Gomez-Uchida D, Seeb JE, Smith MJ, Habicht C, Quinn TP, Seeb LW.

BMC Evol Biol. 2011 Feb 18;11:48. doi: 10.1186/1471-2148-11-48.

18.

The influence of hydrology and waterway distance on population structure of Chinook salmon Oncorhynchus tshawytscha in a large river.

Olsen JB, Beacham TD, Wetklo M, Seeb LW, Smith CT, Flannery BG, Wenburg JK.

J Fish Biol. 2010 Apr;76(5):1128-48. doi: 10.1111/j.1095-8649.2010.02554.x.

PMID:
20409166
19.

SNP genotyping by the 5'-nuclease reaction: advances in high-throughput genotyping with nonmodel organisms.

Seeb JE, Pascal CE, Ramakrishnan R, Seeb LW.

Methods Mol Biol. 2009;578:277-92. doi: 10.1007/978-1-60327-411-1_18.

PMID:
19768601
20.

Differentiating salmon populations at broad and fine geographical scales with microsatellites and single nucleotide polymorphisms.

Narum SR, Banks M, Beacham TD, Bellinger MR, Campbell MR, Dekoning J, Elz A, Guthrie CM 3rd, Kozfkay C, Miller KM, Moran P, Phillips R, Seeb LW, Smith CT, Warheit K, Young SF, Garza JC.

Mol Ecol. 2008 Aug;17(15):3464-77.

PMID:
19160476
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