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Results: 18

1.

Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria.

Haft RJ, Keating DH, Schwaegler T, Schwalbach MS, Vinokur J, Tremaine M, Peters JM, Kotlajich MV, Pohlmann EL, Ong IM, Grass JA, Kiley PJ, Landick R.

Proc Natl Acad Sci U S A. 2014 Jun 24;111(25):E2576-85. doi: 10.1073/pnas.1401853111. Epub 2014 Jun 9.

PMID:
24927582
[PubMed - in process]
Free PMC Article
2.

Abundant SAR11 viruses in the ocean.

Zhao Y, Temperton B, Thrash JC, Schwalbach MS, Vergin KL, Landry ZC, Ellisman M, Deerinck T, Sullivan MB, Giovannoni SJ.

Nature. 2013 Feb 21;494(7437):357-60. doi: 10.1038/nature11921. Epub 2013 Feb 13.

PMID:
23407494
[PubMed - indexed for MEDLINE]
3.

Complex physiology and compound stress responses during fermentation of alkali-pretreated corn stover hydrolysate by an Escherichia coli ethanologen.

Schwalbach MS, Keating DH, Tremaine M, Marner WD, Zhang Y, Bothfeld W, Higbee A, Grass JA, Cotten C, Reed JL, da Costa Sousa L, Jin M, Balan V, Ellinger J, Dale B, Kiley PJ, Landick R.

Appl Environ Microbiol. 2012 May;78(9):3442-57. doi: 10.1128/AEM.07329-11. Epub 2012 Mar 2.

PMID:
22389370
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Energy starved Candidatus Pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration.

Steindler L, Schwalbach MS, Smith DP, Chan F, Giovannoni SJ.

PLoS One. 2011 May 9;6(5):e19725. doi: 10.1371/journal.pone.0019725.

PMID:
21573025
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Marine bacterial, archaeal and protistan association networks reveal ecological linkages.

Steele JA, Countway PD, Xia L, Vigil PD, Beman JM, Kim DY, Chow CE, Sachdeva R, Jones AC, Schwalbach MS, Rose JM, Hewson I, Patel A, Sun F, Caron DA, Fuhrman JA.

ISME J. 2011 Sep;5(9):1414-25. doi: 10.1038/ismej.2011.24. Epub 2011 Mar 24.

PMID:
21430787
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Transcriptional and translational regulatory responses to iron limitation in the globally distributed marine bacterium Candidatus pelagibacter ubique.

Smith DP, Kitner JB, Norbeck AD, Clauss TR, Lipton MS, Schwalbach MS, Steindler L, Nicora CD, Smith RD, Giovannoni SJ.

PLoS One. 2010 May 5;5(5):e10487. doi: 10.1371/journal.pone.0010487.

PMID:
20463970
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The presence of the glycolysis operon in SAR11 genomes is positively correlated with ocean productivity.

Schwalbach MS, Tripp HJ, Steindler L, Smith DP, Giovannoni SJ.

Environ Microbiol. 2010 Feb;12(2):490-500. doi: 10.1111/j.1462-2920.2009.02092.x. Epub 2009 Nov 3.

PMID:
19889000
[PubMed - indexed for MEDLINE]
8.

Identification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique'.

Meyer MM, Ames TD, Smith DP, Weinberg Z, Schwalbach MS, Giovannoni SJ, Breaker RR.

BMC Genomics. 2009 Jun 16;10:268. doi: 10.1186/1471-2164-10-268.

PMID:
19531245
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11.

Tripp HJ, Schwalbach MS, Meyer MM, Kitner JB, Breaker RR, Giovannoni SJ.

Environ Microbiol. 2009 Jan;11(1):230-8. doi: 10.1111/j.1462-2920.2008.01758.x.

PMID:
19125817
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

A latitudinal diversity gradient in planktonic marine bacteria.

Fuhrman JA, Steele JA, Hewson I, Schwalbach MS, Brown MV, Green JL, Brown JH.

Proc Natl Acad Sci U S A. 2008 Jun 3;105(22):7774-8. doi: 10.1073/pnas.0803070105. Epub 2008 May 28.

PMID:
18509059
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Proteorhodopsins: an array of physiological roles?

Fuhrman JA, Schwalbach MS, Stingl U.

Nat Rev Microbiol. 2008 Jun;6(6):488-94. doi: 10.1038/nrmicro1893. Epub 2008 May 13. Review.

PMID:
18475306
[PubMed - indexed for MEDLINE]
12.

SAR11 marine bacteria require exogenous reduced sulphur for growth.

Tripp HJ, Kitner JB, Schwalbach MS, Dacey JW, Wilhelm LJ, Giovannoni SJ.

Nature. 2008 Apr 10;452(7188):741-4. doi: 10.1038/nature06776. Epub 2008 Mar 12.

PMID:
18337719
[PubMed - indexed for MEDLINE]
13.

Polyphyletic photosynthetic reaction centre genes in oligotrophic marine Gammaproteobacteria.

Cho JC, Stapels MD, Morris RM, Vergin KL, Schwalbach MS, Givan SA, Barofsky DF, Giovannoni SJ.

Environ Microbiol. 2007 Jun;9(6):1456-63.

PMID:
17504483
[PubMed - indexed for MEDLINE]
14.

Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I.

Patel A, Noble RT, Steele JA, Schwalbach MS, Hewson I, Fuhrman JA.

Nat Protoc. 2007;2(2):269-76.

PMID:
17406585
[PubMed - indexed for MEDLINE]
15.

Annually reoccurring bacterial communities are predictable from ocean conditions.

Fuhrman JA, Hewson I, Schwalbach MS, Steele JA, Brown MV, Naeem S.

Proc Natl Acad Sci U S A. 2006 Aug 29;103(35):13104-9. Epub 2006 Aug 22.

PMID:
16938845
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors.

Ruan Q, Dutta D, Schwalbach MS, Steele JA, Fuhrman JA, Sun F.

Bioinformatics. 2006 Oct 15;22(20):2532-8. Epub 2006 Jul 31.

PMID:
16882654
[PubMed - indexed for MEDLINE]
Free Article
17.

A dynamic programming algorithm for binning microbial community profiles.

Ruan Q, Steele JA, Schwalbach MS, Fuhrman JA, Sun F.

Bioinformatics. 2006 Jun 15;22(12):1508-14. Epub 2006 Mar 27.

PMID:
16567364
[PubMed - indexed for MEDLINE]
Free Article
18.

Coupling 16S-ITS rDNA clone libraries and automated ribosomal intergenic spacer analysis to show marine microbial diversity: development and application to a time series.

Brown MV, Schwalbach MS, Hewson I, Fuhrman JA.

Environ Microbiol. 2005 Sep;7(9):1466-79.

PMID:
16104869
[PubMed - indexed for MEDLINE]

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