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Results: 1 to 20 of 81

1.

Uncapped 5' ends of mRNAs targeted by cytoplasmic capping map to the vicinity of downstream CAGE tags.

Kiss DL, Oman K, Bundschuh R, Schoenberg DR.

FEBS Lett. 2015 Jan 30;589(3):279-84. doi: 10.1016/j.febslet.2014.12.009. Epub 2014 Dec 23.

PMID:
25541487
2.

The cytoplasmic capping complex assembles on adapter protein nck1 bound to the proline-rich C-terminus of Mammalian capping enzyme.

Mukherjee C, Bakthavachalu B, Schoenberg DR.

PLoS Biol. 2014 Aug 19;12(8):e1001933. doi: 10.1371/journal.pbio.1001933. eCollection 2014 Aug.

3.

Translation from a DMD exon 5 IRES results in a functional dystrophin isoform that attenuates dystrophinopathy in humans and mice.

Wein N, Vulin A, Falzarano MS, Szigyarto CA, Maiti B, Findlay A, Heller KN, Uhlén M, Bakthavachalu B, Messina S, Vita G, Passarelli C, Gualandi F, Wilton SD, Rodino-Klapac LR, Yang L, Dunn DM, Schoenberg DR, Weiss RB, Howard MT, Ferlini A, Flanigan KM.

Nat Med. 2014 Sep;20(9):992-1000. doi: 10.1038/nm.3628. Epub 2014 Aug 10.

4.

Quantitative analysis of deadenylation-independent mRNA decay by a modified MBRACE assay.

Dougherty JA, Mascarenhas R, Schoenberg DR.

Methods Mol Biol. 2014;1125:353-71. doi: 10.1007/978-1-62703-971-0_28.

5.

Poly(A) polymerase-based poly(A) length assay.

Patil DP, Bakthavachalu B, Schoenberg DR.

Methods Mol Biol. 2014;1125:13-23. doi: 10.1007/978-1-62703-971-0_2.

6.

SMG6 cleavage generates metastable decay intermediates from nonsense-containing β-globin mRNA.

Mascarenhas R, Dougherty JA, Schoenberg DR.

PLoS One. 2013 Sep 25;8(9):e74791. doi: 10.1371/journal.pone.0074791. eCollection 2013.

7.

Identification of cytoplasmic capping targets reveals a role for cap homeostasis in translation and mRNA stability.

Mukherjee C, Patil DP, Kennedy BA, Bakthavachalu B, Bundschuh R, Schoenberg DR.

Cell Rep. 2012 Sep 27;2(3):674-84. doi: 10.1016/j.celrep.2012.07.011. Epub 2012 Aug 23.

8.

Identification of the human PMR1 mRNA endonuclease as an alternatively processed product of the gene for peroxidasin-like protein.

Gu SQ, Bakthavachalu B, Han J, Patil DP, Otsuka Y, Guda C, Schoenberg DR.

RNA. 2012 Jun;18(6):1186-96. doi: 10.1261/rna.031369.111. Epub 2012 Apr 27.

9.

Regulation of cytoplasmic mRNA decay.

Schoenberg DR, Maquat LE.

Nat Rev Genet. 2012 Mar 6;13(4):246-59. doi: 10.1038/nrg3160. Review. Erratum in: Nat Rev Genet. 2012 Jun;13(6):448.

10.

Mycobacterium tuberculosis lipomannan blocks TNF biosynthesis by regulating macrophage MAPK-activated protein kinase 2 (MK2) and microRNA miR-125b.

Rajaram MV, Ni B, Morris JD, Brooks MN, Carlson TK, Bakthavachalu B, Schoenberg DR, Torrelles JB, Schlesinger LS.

Proc Natl Acad Sci U S A. 2011 Oct 18;108(42):17408-13. doi: 10.1073/pnas.1112660108. Epub 2011 Oct 3.

11.

Mechanisms of endonuclease-mediated mRNA decay.

Schoenberg DR.

Wiley Interdiscip Rev RNA. 2011 Jul-Aug;2(4):582-600. doi: 10.1002/wrna.78. Epub 2011 Feb 10. Review.

12.

KSRP-PMR1-exosome association determines parathyroid hormone mRNA levels and stability in transfected cells.

Nechama M, Peng Y, Bell O, Briata P, Gherzi R, Schoenberg DR, Naveh-Many T.

BMC Cell Biol. 2009 Sep 23;10:70. doi: 10.1186/1471-2121-10-70.

13.

Re-capping the message.

Schoenberg DR, Maquat LE.

Trends Biochem Sci. 2009 Sep;34(9):435-42. doi: 10.1016/j.tibs.2009.05.003. Epub 2009 Sep 2. Review.

14.

RNA processing defects associated with diseases of the motor neuron.

Kolb SJ, Sutton S, Schoenberg DR.

Muscle Nerve. 2010 Jan;41(1):5-17. doi: 10.1002/mus.21428. Review.

15.

Identification of a cytoplasmic complex that adds a cap onto 5'-monophosphate RNA.

Otsuka Y, Kedersha NL, Schoenberg DR.

Mol Cell Biol. 2009 Apr;29(8):2155-67. doi: 10.1128/MCB.01325-08. Epub 2009 Feb 17.

16.

The cytoskeleton-associated Ena/VASP proteins are unanticipated partners of the PMR1 mRNA endonuclease.

Peng Y, Murray EL, Sarkar M, Liu X, Schoenberg DR.

RNA. 2009 Apr;15(4):576-87. doi: 10.1261/rna.1206209. Epub 2009 Feb 17.

17.

Assays for determining poly(A) tail length and the polarity of mRNA decay in mammalian cells.

Murray EL, Schoenberg DR.

Methods Enzymol. 2008;448:483-504. doi: 10.1016/S0076-6879(08)02624-4.

18.

Approaches for studying PMR1 endonuclease-mediated mRNA decay.

Otsuka Y, Schoenberg DR.

Methods Enzymol. 2008;448:241-63. doi: 10.1016/S0076-6879(08)02613-X.

19.

Common SNP in pre-miR-146a decreases mature miR expression and predisposes to papillary thyroid carcinoma.

Jazdzewski K, Murray EL, Franssila K, Jarzab B, Schoenberg DR, de la Chapelle A.

Proc Natl Acad Sci U S A. 2008 May 20;105(20):7269-74. doi: 10.1073/pnas.0802682105. Epub 2008 May 12.

20.

Application of the Invader RNA assay to the polarity of vertebrate mRNA decay.

Murray EL, Schoenberg DR.

Methods Mol Biol. 2008;419:259-76. doi: 10.1007/978-1-59745-033-1_18.

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