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Items: 16

1.

Multiplex sequencing of bacterial artificial chromosomes for assembling complex plant genomes.

Beier S, Himmelbach A, Schmutzer T, Felder M, Taudien S, Mayer KF, Platzer M, Stein N, Scholz U, Mascher M.

Plant Biotechnol J. 2016 Jan 23. doi: 10.1111/pbi.12511. [Epub ahead of print]

PMID:
26801048
2.

Species-wide genome sequence and nucleotide polymorphisms from the model allopolyploid plant Brassica napus.

Schmutzer T, Samans B, Dyrszka E, Ulpinnis C, Weise S, Stengel D, Colmsee C, Lespinasse D, Micic Z, Abel S, Duchscherer P, Breuer F, Abbadi A, Leckband G, Snowdon R, Scholz U.

Sci Data. 2015 Dec 8;2:150072. doi: 10.1038/sdata.2015.72.

3.

Cytogenetic mapping with centromeric bacterial artificial chromosomes contigs shows that this recombination-poor region comprises more than half of barley chromosome 3H.

Aliyeva-Schnorr L, Beier S, Karafiátová M, Schmutzer T, Scholz U, Doležel J, Stein N, Houben A.

Plant J. 2015 Oct;84(2):385-94. doi: 10.1111/tpj.13006.

PMID:
26332657
4.

Metatranscriptome analysis reveals host-microbiome interactions in traps of carnivorous Genlisea species.

Cao HX, Schmutzer T, Scholz U, Pecinka A, Schubert I, Vu GT.

Front Microbiol. 2015 Jul 14;6:526. doi: 10.3389/fmicb.2015.00526. eCollection 2015.

5.

Targeted Sequencing Reveals Large-Scale Sequence Polymorphism in Maize Candidate Genes for Biomass Production and Composition.

Muraya MM, Schmutzer T, Ulpinnis C, Scholz U, Altmann T.

PLoS One. 2015 Jul 7;10(7):e0132120. doi: 10.1371/journal.pone.0132120. eCollection 2015.

6.

Heterotic Haplotype Capture: precision breeding for hybrid performance.

Snowdon RJ, Abbadi A, Kox T, Schmutzer T, Leckband G.

Trends Plant Sci. 2015 Jul;20(7):410-3. doi: 10.1016/j.tplants.2015.04.013. Epub 2015 May 29.

PMID:
26027461
7.

BARLEX - the Barley Draft Genome Explorer.

Colmsee C, Beier S, Himmelbach A, Schmutzer T, Stein N, Scholz U, Mascher M.

Mol Plant. 2015 Jun;8(6):964-6. doi: 10.1016/j.molp.2015.03.009. Epub 2015 Mar 21. No abstract available.

8.

FISH mapping for physical map improvement in the large genome of barley: a case study on chromosome 2H.

Poursarebani N, Ma L, Schmutzer T, Houben A, Stein N.

Cytogenet Genome Res. 2014;143(4):275-9. doi: 10.1159/000366028. Epub 2014 Sep 3.

PMID:
25195637
9.

Kmasker--a tool for in silico prediction of single-copy FISH probes for the large-genome species Hordeum vulgare.

Schmutzer T, Ma L, Pousarebani N, Bull F, Stein N, Houben A, Scholz U.

Cytogenet Genome Res. 2014;142(1):66-78. doi: 10.1159/000356460. Epub 2013 Dec 6.

PMID:
24335088
10.

A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms.

Ariyadasa R, Mascher M, Nussbaumer T, Schulte D, Frenkel Z, Poursarebani N, Zhou R, Steuernagel B, Gundlach H, Taudien S, Felder M, Platzer M, Himmelbach A, Schmutzer T, Hedley PE, Muehlbauer GJ, Scholz U, Korol A, Mayer KF, Waugh R, Langridge P, Graner A, Stein N.

Plant Physiol. 2014 Jan;164(1):412-23. doi: 10.1104/pp.113.228213. Epub 2013 Nov 15.

11.

Asexual genome evolution in the apomictic Ranunculus auricomus complex: examining the effects of hybridization and mutation accumulation.

Pellino M, Hojsgaard D, Schmutzer T, Scholz U, Hörandl E, Vogel H, Sharbel TF.

Mol Ecol. 2013 Dec;22(23):5908-21. doi: 10.1111/mec.12533. Epub 2013 Nov 6.

PMID:
24118210
12.

Reticulate evolution of the rye genome.

Martis MM, Zhou R, Haseneyer G, Schmutzer T, Vrána J, Kubaláková M, König S, Kugler KG, Scholz U, Hackauf B, Korzun V, Schön CC, Dolezel J, Bauer E, Mayer KF, Stein N.

Plant Cell. 2013 Oct;25(10):3685-98. doi: 10.1105/tpc.113.114553. Epub 2013 Oct 8.

13.

A putative role for amino acid permeases in sink-source communication of barley tissues uncovered by RNA-seq.

Kohl S, Hollmann J, Blattner FR, Radchuk V, Andersch F, Steuernagel B, Schmutzer T, Scholz U, Krupinska K, Weber H, Weschke W.

BMC Plant Biol. 2012 Aug 30;12:154. doi: 10.1186/1471-2229-12-154.

14.

Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences.

Martis MM, Klemme S, Banaei-Moghaddam AM, Blattner FR, Macas J, Schmutzer T, Scholz U, Gundlach H, Wicker T, Šimková H, Novák P, Neumann P, Kubaláková M, Bauer E, Haseneyer G, Fuchs J, Doležel J, Stein N, Mayer KF, Houben A.

Proc Natl Acad Sci U S A. 2012 Aug 14;109(33):13343-6. doi: 10.1073/pnas.1204237109. Epub 2012 Jul 30.

15.

Sequencing of BAC pools by different next generation sequencing platforms and strategies.

Taudien S, Steuernagel B, Ariyadasa R, Schulte D, Schmutzer T, Groth M, Felder M, Petzold A, Scholz U, Mayer KF, Stein N, Platzer M.

BMC Res Notes. 2011 Oct 14;4:411. doi: 10.1186/1756-0500-4-411.

16.

From RNA-seq to large-scale genotyping - genomics resources for rye (Secale cereale L.).

Haseneyer G, Schmutzer T, Seidel M, Zhou R, Mascher M, Schön CC, Taudien S, Scholz U, Stein N, Mayer KF, Bauer E.

BMC Plant Biol. 2011 Sep 28;11:131. doi: 10.1186/1471-2229-11-131.

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