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Results: 1 to 20 of 80

1.

DNA methylation is required for the control of stem cell differentiation in the small intestine.

Sheaffer KL, Kim R, Aoki R, Elliott EN, Schug J, Burger L, Schübeler D, Kaestner KH.

Genes Dev. 2014 Mar 15;28(6):652-64. doi: 10.1101/gad.230318.113.

PMID:
24637118
[PubMed - indexed for MEDLINE]
2.

Genomic patterns and context specific interpretation of DNA methylation.

Baubec T, Schübeler D.

Curr Opin Genet Dev. 2014 Apr;25:85-92. doi: 10.1016/j.gde.2013.11.015. Epub 2014 Mar 7.

PMID:
24614011
[PubMed - in process]
3.

DNA sequence explains seemingly disordered methylation levels in partially methylated domains of Mammalian genomes.

Gaidatzis D, Burger L, Murr R, Lerch A, Dessus-Babus S, Schübeler D, Stadler MB.

PLoS Genet. 2014 Feb 13;10(2):e1004143. doi: 10.1371/journal.pgen.1004143. eCollection 2014 Feb.

PMID:
24550741
[PubMed - in process]
Free PMC Article
4.

Ezh2 is required for neural crest-derived cartilage and bone formation.

Schwarz D, Varum S, Zemke M, Schöler A, Baggiolini A, Draganova K, Koseki H, Schübeler D, Sommer L.

Development. 2014 Feb;141(4):867-77. doi: 10.1242/dev.094342.

PMID:
24496623
[PubMed - indexed for MEDLINE]
5.

Transcription factor occupancy can mediate active turnover of DNA methylation at regulatory regions.

Feldmann A, Ivanek R, Murr R, Gaidatzis D, Burger L, Schübeler D.

PLoS Genet. 2013 Dec;9(12):e1003994. doi: 10.1371/journal.pgen.1003994. Epub 2013 Dec 19.

PMID:
24367273
[PubMed - in process]
Free PMC Article
6.

Gene regulation and priming by topoisomerase IIα in embryonic stem cells.

Thakurela S, Garding A, Jung J, Schübeler D, Burger L, Tiwari VK.

Nat Commun. 2013;4:2478. doi: 10.1038/ncomms3478.

PMID:
24072229
[PubMed - indexed for MEDLINE]
7.

Twisting chromatin in stem cells.

Ginno P, Schübeler D.

EMBO J. 2013 Aug 28;32(17):2304-6. doi: 10.1038/emboj.2013.179. Epub 2013 Aug 6. No abstract available.

PMID:
23921555
[PubMed - indexed for MEDLINE]
Free Article
8.

Identification of active regulatory regions from DNA methylation data.

Burger L, Gaidatzis D, Schübeler D, Stadler MB.

Nucleic Acids Res. 2013 Sep;41(16):e155. doi: 10.1093/nar/gkt599. Epub 2013 Jul 4.

PMID:
23828043
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa.

Erkek S, Hisano M, Liang CY, Gill M, Murr R, Dieker J, Schübeler D, van der Vlag J, Stadler MB, Peters AH.

Nat Struct Mol Biol. 2013 Jul;20(7):868-75. doi: 10.1038/nsmb.2599. Epub 2013 Jun 16. Erratum in: Nat Struct Mol Biol. 2013 Oct;20(10):1236.

PMID:
23770822
[PubMed - indexed for MEDLINE]
10.

Sox4 is a master regulator of epithelial-mesenchymal transition by controlling Ezh2 expression and epigenetic reprogramming.

Tiwari N, Tiwari VK, Waldmeier L, Balwierz PJ, Arnold P, Pachkov M, Meyer-Schaller N, Schübeler D, van Nimwegen E, Christofori G.

Cancer Cell. 2013 Jun 10;23(6):768-83. doi: 10.1016/j.ccr.2013.04.020.

PMID:
23764001
[PubMed - indexed for MEDLINE]
Free Article
11.

Protein complex interactor analysis and differential activity of KDM3 subfamily members towards H3K9 methylation.

Brauchle M, Yao Z, Arora R, Thigale S, Clay I, Inverardi B, Fletcher J, Taslimi P, Acker MG, Gerrits B, Voshol J, Bauer A, Schübeler D, Bouwmeester T, Ruffner H.

PLoS One. 2013 Apr 11;8(4):e60549. doi: 10.1371/journal.pone.0060549. Print 2013.

PMID:
23593242
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Methylation-dependent and -independent genomic targeting principles of the MBD protein family.

Baubec T, Ivánek R, Lienert F, Schübeler D.

Cell. 2013 Apr 11;153(2):480-92. doi: 10.1016/j.cell.2013.03.011.

PMID:
23582333
[PubMed - indexed for MEDLINE]
Free Article
13.

Molecular biology. Epigenetic islands in a genetic ocean.

Schübeler D.

Science. 2012 Nov 9;338(6108):756-7. doi: 10.1126/science.1227243. No abstract available.

PMID:
23139324
[PubMed - indexed for MEDLINE]
14.

Tracking the evolution of cancer methylomes.

Krebs AR, Schübeler D.

Nat Genet. 2012 Nov;44(11):1173-4. doi: 10.1038/ng.2451.

PMID:
23104061
[PubMed - indexed for MEDLINE]
15.

Identification of Dlk1-Dio3 imprinted gene cluster noncoding RNAs as novel candidate biomarkers for liver tumor promotion.

Lempiäinen H, Couttet P, Bolognani F, Müller A, Dubost V, Luisier R, Del Rio Espinola A, Vitry V, Unterberger EB, Thomson JP, Treindl F, Metzger U, Wrzodek C, Hahne F, Zollinger T, Brasa S, Kalteis M, Marcellin M, Giudicelli F, Braeuning A, Morawiec L, Zamurovic N, Längle U, Scheer N, Schübeler D, Goodman J, Chibout SD, Marlowe J, Theil D, Heard DJ, Grenet O, Zell A, Templin MF, Meehan RR, Wolf RC, Elcombe CR, Schwarz M, Moulin P, Terranova R, Moggs JG.

Toxicol Sci. 2013 Feb;131(2):375-86. doi: 10.1093/toxsci/kfs303. Epub 2012 Oct 22.

PMID:
23091169
[PubMed - indexed for MEDLINE]
Free Article
16.

Non-genotoxic carcinogen exposure induces defined changes in the 5-hydroxymethylome.

Thomson JP, Lempiäinen H, Hackett JA, Nestor CE, Müller A, Bolognani F, Oakeley EJ, Schübeler D, Terranova R, Reinhardt D, Moggs JG, Meehan RR.

Genome Biol. 2012 Oct 3;13(10):R93. [Epub ahead of print]

PMID:
23034186
[PubMed - as supplied by publisher]
Free PMC Article
17.

Modeling of epigenome dynamics identifies transcription factors that mediate Polycomb targeting.

Arnold P, Schöler A, Pachkov M, Balwierz PJ, Jørgensen H, Stadler MB, van Nimwegen E, Schübeler D.

Genome Res. 2013 Jan;23(1):60-73. doi: 10.1101/gr.142661.112. Epub 2012 Sep 10.

PMID:
22964890
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Chromatin measurements reveal contributions of synthesis and decay to steady-state mRNA levels.

Tippmann SC, Ivanek R, Gaidatzis D, Schöler A, Hoerner L, van Nimwegen E, Stadler PF, Stadler MB, Schübeler D.

Mol Syst Biol. 2012 Jul 17;8:593. doi: 10.1038/msb.2012.23.

PMID:
22806141
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Target genes of Topoisomerase IIβ regulate neuronal survival and are defined by their chromatin state.

Tiwari VK, Burger L, Nikoletopoulou V, Deogracias R, Thakurela S, Wirbelauer C, Kaut J, Terranova R, Hoerner L, Mielke C, Boege F, Murr R, Peters AH, Barde YA, Schübeler D.

Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):E934-43. doi: 10.1073/pnas.1119798109. Epub 2012 Apr 2.

PMID:
22474351
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

BLUEPRINT to decode the epigenetic signature written in blood.

Adams D, Altucci L, Antonarakis SE, Ballesteros J, Beck S, Bird A, Bock C, Boehm B, Campo E, Caricasole A, Dahl F, Dermitzakis ET, Enver T, Esteller M, Estivill X, Ferguson-Smith A, Fitzgibbon J, Flicek P, Giehl C, Graf T, Grosveld F, Guigo R, Gut I, Helin K, Jarvius J, Küppers R, Lehrach H, Lengauer T, Lernmark Å, Leslie D, Loeffler M, Macintyre E, Mai A, Martens JH, Minucci S, Ouwehand WH, Pelicci PG, Pendeville H, Porse B, Rakyan V, Reik W, Schrappe M, Schübeler D, Seifert M, Siebert R, Simmons D, Soranzo N, Spicuglia S, Stratton M, Stunnenberg HG, Tanay A, Torrents D, Valencia A, Vellenga E, Vingron M, Walter J, Willcocks S.

Nat Biotechnol. 2012 Mar 7;30(3):224-6. doi: 10.1038/nbt.2153. No abstract available.

PMID:
22398613
[PubMed - indexed for MEDLINE]

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