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Results: 1 to 20 of 31

1.

FineSplice, enhanced splice junction detection and quantification: a novel pipeline based on the assessment of diverse RNA-Seq alignment solutions.

Gatto A, Torroja-Fungairiño C, Mazzarotto F, Cook SA, Barton PJ, Sánchez-Cabo F, Lara-Pezzi E.

Nucleic Acids Res. 2014 Apr;42(8):e71. doi: 10.1093/nar/gku166. Epub 2014 Feb 25.

PMID:
24574529
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Sumoylated hnRNPA2B1 controls the sorting of miRNAs into exosomes through binding to specific motifs.

Villarroya-Beltri C, Gutiérrez-Vázquez C, Sánchez-Cabo F, Pérez-Hernández D, Vázquez J, Martin-Cofreces N, Martinez-Herrera DJ, Pascual-Montano A, Mittelbrunn M, Sánchez-Madrid F.

Nat Commun. 2013;4:2980. doi: 10.1038/ncomms3980.

PMID:
24356509
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Analysis of the DNA-binding profile and function of TALE homeoproteins reveals their specialization and specific interactions with Hox genes/proteins.

Penkov D, Mateos San Martín D, Fernandez-Díaz LC, Rosselló CA, Torroja C, Sánchez-Cabo F, Warnatz HJ, Sultan M, Yaspo ML, Gabrieli A, Tkachuk V, Brendolan A, Blasi F, Torres M.

Cell Rep. 2013 Apr 25;3(4):1321-33. doi: 10.1016/j.celrep.2013.03.029. Epub 2013 Apr 18.

PMID:
23602564
[PubMed - indexed for MEDLINE]
Free Article
4.

Embryological-origin-dependent differences in homeobox expression in adult aorta: role in regional phenotypic variability and regulation of NF-κB activity.

Trigueros-Motos L, González-Granado JM, Cheung C, Fernández P, Sánchez-Cabo F, Dopazo A, Sinha S, Andrés V.

Arterioscler Thromb Vasc Biol. 2013 Jun;33(6):1248-56. doi: 10.1161/ATVBAHA.112.300539. Epub 2013 Feb 28.

PMID:
23448971
[PubMed - indexed for MEDLINE]
Free Article
5.

Aryl hydrocarbon receptor contributes to the MEK/ERK-dependent maintenance of the immature state of human dendritic cells.

Aguilera-Montilla N, Chamorro S, Nieto C, Sánchez-Cabo F, Dopazo A, Fernández-Salguero PM, Rodríguez-Fernández JL, Pello OM, Andrés V, Cuenda A, Alonso B, Domínguez-Soto A, Sánchez-Ramón S, Corbí AL.

Blood. 2013 Apr 11;121(15):e108-17. doi: 10.1182/blood-2012-07-445106. Epub 2013 Feb 21.

PMID:
23430108
[PubMed - indexed for MEDLINE]
Free Article
6.

Spatial and temporal gene expression differences in core and periinfarct areas in experimental stroke: a microarray analysis.

Ramos-Cejudo J, Gutiérrez-Fernández M, Rodríguez-Frutos B, Expósito Alcaide M, Sánchez-Cabo F, Dopazo A, Díez-Tejedor E.

PLoS One. 2012;7(12):e52121. doi: 10.1371/journal.pone.0052121. Epub 2012 Dec 17.

PMID:
23284893
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Procyanidins modulate microRNA expression in pancreatic islets.

Castell-Auví A, Cedó L, Movassat J, Portha B, Sánchez-Cabo F, Pallarès V, Blay M, Pinent M, Ardévol A.

J Agric Food Chem. 2013 Jan 16;61(2):355-63. doi: 10.1021/jf303972f. Epub 2013 Jan 4.

PMID:
23215023
[PubMed - indexed for MEDLINE]
8.

Cooperativity of stress-responsive transcription factors in core hypoxia-inducible factor binding regions.

Villar D, Ortiz-Barahona A, Gómez-Maldonado L, Pescador N, Sánchez-Cabo F, Hackl H, Rodriguez BA, Trajanoski Z, Dopazo A, Huang TH, Yan PS, Del Peso L.

PLoS One. 2012;7(9):e45708. doi: 10.1371/journal.pone.0045708. Epub 2012 Sep 24.

PMID:
23029193
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Caveolar domain organization and trafficking is regulated by Abl kinases and mDia1.

Echarri A, Muriel O, Pavón DM, Azegrouz H, Escolar F, Terrón MC, Sanchez-Cabo F, Martínez F, Montoya MC, Llorca O, Del Pozo MA.

J Cell Sci. 2012 Jul 1;125(Pt 13):3097-113. doi: 10.1242/jcs.090134. Epub 2012 Mar 27. Erratum in: J Cell Sci. 2012 Sep 15;125(Pt 18):4413.

PMID:
22454521
[PubMed - indexed for MEDLINE]
Free Article
10.

Unidirectional transfer of microRNA-loaded exosomes from T cells to antigen-presenting cells.

Mittelbrunn M, Gutiérrez-Vázquez C, Villarroya-Beltri C, González S, Sánchez-Cabo F, González MÁ, Bernad A, Sánchez-Madrid F.

Nat Commun. 2011;2:282. doi: 10.1038/ncomms1285.

PMID:
21505438
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Insights into global mechanisms and disease by gene expression profiling.

Sánchez-Cabo F, Rainer J, Dopazo A, Trajanoski Z, Hackl H.

Methods Mol Biol. 2011;719:269-98. doi: 10.1007/978-1-61779-027-0_13.

PMID:
21370089
[PubMed - indexed for MEDLINE]
12.

Statistical analysis principles for Omics data.

Dunkler D, Sánchez-Cabo F, Heinze G.

Methods Mol Biol. 2011;719:113-31. doi: 10.1007/978-1-61779-027-0_5.

PMID:
21370081
[PubMed - indexed for MEDLINE]
13.

PGC-1α regulates translocated in liposarcoma activity: role in oxidative stress gene expression.

Sánchez-Ramos C, Tierrez A, Fabregat-Andrés O, Wild B, Sánchez-Cabo F, Arduini A, Dopazo A, Monsalve M.

Antioxid Redox Signal. 2011 Jul 15;15(2):325-37. doi: 10.1089/ars.2010.3643. Epub 2011 May 21.

PMID:
21338289
[PubMed - indexed for MEDLINE]
14.

A genome-wide shRNA screen for new OxPhos related genes.

Bayona-Bafaluy MP, Sánchez-Cabo F, Fernández-Silva P, Pérez-Martos A, Enríquez JA.

Mitochondrion. 2011 May;11(3):467-75. doi: 10.1016/j.mito.2011.01.007. Epub 2011 Feb 1.

PMID:
21292037
[PubMed - indexed for MEDLINE]
15.

Assessment of a six gene panel for the molecular detection of circulating tumor cells in the blood of female cancer patients.

Obermayr E, Sanchez-Cabo F, Tea MK, Singer CF, Krainer M, Fischer MB, Sehouli J, Reinthaller A, Horvat R, Heinze G, Tong D, Zeillinger R.

BMC Cancer. 2010 Dec 3;10:666. doi: 10.1186/1471-2407-10-666.

PMID:
21129172
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Adaptive trimmed t-statistics for identifying predominantly high expression in a microarray experiment.

Gleiss A, Sanchez-Cabo F, Perco P, Tong D, Heinze G.

Stat Med. 2011 Jan 15;30(1):52-61. doi: 10.1002/sim.4093. Epub 2010 Oct 20.

PMID:
20963766
[PubMed - indexed for MEDLINE]
17.

The novel RUNX3/p33 isoform is induced upon monocyte-derived dendritic cell maturation and downregulates IL-8 expression.

Puig-Kröger A, Aguilera-Montilla N, Martínez-Nuñez R, Domínguez-Soto A, Sánchez-Cabo F, Martín-Gayo E, Zaballos A, Toribio ML, Groner Y, Ito Y, Dopazo A, Corcuera MT, Alonso Martín MJ, Vega MA, Corbí AL.

Immunobiology. 2010 Sep-Oct;215(9-10):812-20. doi: 10.1016/j.imbio.2010.05.018. Epub 2010 Jun 20.

PMID:
20615577
[PubMed - indexed for MEDLINE]
18.

Reconstruction of gene association network reveals a transmembrane protein required for adipogenesis and targeted by PPARγ.

Bogner-Strauss JG, Prokesch A, Sanchez-Cabo F, Rieder D, Hackl H, Duszka K, Krogsdam A, Di Camillo B, Walenta E, Klatzer A, Lass A, Pinent M, Wong WC, Eisenhaber F, Trajanoski Z.

Cell Mol Life Sci. 2010 Dec;67(23):4049-64. doi: 10.1007/s00018-010-0424-5. Epub 2010 Jun 15.

PMID:
20552250
[PubMed - indexed for MEDLINE]
19.

Data integration and exploration for the identification of molecular mechanisms in tumor-immune cells interaction.

Mlecnik B, Sanchez-Cabo F, Charoentong P, Bindea G, Pagès F, Berger A, Galon J, Trajanoski Z.

BMC Genomics. 2010 Feb 10;11 Suppl 1:S7. doi: 10.1186/1471-2164-11-S1-S7.

PMID:
20158878
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Comparative transcriptomics of human multipotent stem cells during adipogenesis and osteoblastogenesis.

Scheideler M, Elabd C, Zaragosi LE, Chiellini C, Hackl H, Sanchez-Cabo F, Yadav S, Duszka K, Friedl G, Papak C, Prokesch A, Windhager R, Ailhaud G, Dani C, Amri EZ, Trajanoski Z.

BMC Genomics. 2008 Jul 17;9:340. doi: 10.1186/1471-2164-9-340.

PMID:
18637193
[PubMed - indexed for MEDLINE]
Free PMC Article

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