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Results: 1 to 20 of 25

1.

Towards a global IT system for personalized medicine: the Medicine Safety Code initiative.

Samwald M, Minarro-Giménez JA, Blagec K, Adlassnig KP.

Stud Health Technol Inform. 2014;198:25-31.

PMID:
24825681
[PubMed - in process]
2.

An ontology-based, mobile-optimized system for pharmacogenomic decision support at the point-of-care.

Miñarro-Giménez JA, Blagec K, Boyce RD, Adlassnig KP, Samwald M.

PLoS One. 2014 May 2;9(5):e93769. doi: 10.1371/journal.pone.0093769. eCollection 2014.

PMID:
24787444
[PubMed - in process]
Free PMC Article
3.

The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery.

Dumontier M, Baker CJ, Baran J, Callahan A, Chepelev L, Cruz-Toledo J, Del Rio NR, Duck G, Furlong LI, Keath N, Klassen D, McCusker JP, Queralt-Rosinach N, Samwald M, Villanueva-Rosales N, Wilkinson MD, Hoehndorf R.

J Biomed Semantics. 2014 Mar 6;5(1):14. doi: 10.1186/2041-1480-5-14.

PMID:
24602174
[PubMed]
Free PMC Article
4.

Making data on essential pharmacogenes available for every patient everywhere: the Medicine Safety Code initiative.

Samwald M, Freimuth RR.

Pharmacogenomics. 2013 Oct;14(13):1529-31. doi: 10.2217/pgs.13.121. No abstract available.

PMID:
24088121
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Physicians searching the web for medical question answering: a European survey and local user studies.

Samwald M, Kritz M, Gschwandtner M, Stefanov V, Hanbury A.

Stud Health Technol Inform. 2013;192:1103.

PMID:
23920877
[PubMed - in process]
6.

An RDF/OWL knowledge base for query answering and decision support in clinical pharmacogenetics.

Samwald M, Freimuth R, Luciano JS, Lin S, Powers RL, Marshall MS, Adlassnig KP, Dumontier M, Boyce RD.

Stud Health Technol Inform. 2013;192:539-42.

PMID:
23920613
[PubMed - in process]
Free PMC Article
7.

Utilization and perceived problems of online medical resources and search tools among different groups of European physicians.

Kritz M, Gschwandtner M, Stefanov V, Hanbury A, Samwald M.

J Med Internet Res. 2013 Jun 26;15(6):e122. doi: 10.2196/jmir.2436.

PMID:
23803299
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies.

Katayama T, Wilkinson MD, Micklem G, Kawashima S, Yamaguchi A, Nakao M, Yamamoto Y, Okamoto S, Oouchida K, Chun HW, Aerts J, Afzal H, Antezana E, Arakawa K, Aranda B, Belleau F, Bolleman J, Bonnal RJ, Chapman B, Cock PJ, Eriksson T, Gordon PM, Goto N, Hayashi K, Horn H, Ishiwata R, Kaminuma E, Kasprzyk A, Kawaji H, Kido N, Kim YJ, Kinjo AR, Konishi F, Kwon KH, Labarga A, Lamprecht AL, Lin Y, Lindenbaum P, McCarthy L, Morita H, Murakami K, Nagao K, Nishida K, Nishimura K, Nishizawa T, Ogishima S, Ono K, Oshita K, Park KJ, Prins P, Saito TL, Samwald M, Satagopam VP, Shigemoto Y, Smith R, Splendiani A, Sugawara H, Taylor J, Vos RA, Withers D, Yamasaki C, Zmasek CM, Kawamoto S, Okubo K, Asai K, Takagi T.

J Biomed Semantics. 2013 Feb 11;4(1):6. doi: 10.1186/2041-1480-4-6.

PMID:
23398680
[PubMed]
Free PMC Article
9.

Pharmacogenomics in the pocket of every patient? A prototype based on quick response codes.

Samwald M, Adlassnig KP.

J Am Med Inform Assoc. 2013 May 1;20(3):409-12. doi: 10.1136/amiajnl-2012-001275. Epub 2013 Jan 23.

PMID:
23345409
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

A data-driven living review for pharmacogenomic decision support in cancer treatment.

Karakülah G, Suner A, Adlassnig KP, Samwald M.

Stud Health Technol Inform. 2012;180:688-92.

PMID:
22874279
[PubMed - indexed for MEDLINE]
11.

The Arden Syntax standard for clinical decision support: experiences and directions.

Samwald M, Fehre K, de Bruin J, Adlassnig KP.

J Biomed Inform. 2012 Aug;45(4):711-8. doi: 10.1016/j.jbi.2012.02.001. Epub 2012 Feb 10.

PMID:
22342733
[PubMed - indexed for MEDLINE]
Free Article
12.

Semantically enabling pharmacogenomic data for the realization of personalized medicine.

Samwald M, Coulet A, Huerga I, Powers RL, Luciano JS, Freimuth RR, Whipple F, Pichler E, Prud'hommeaux E, Dumontier M, Marshall MS.

Pharmacogenomics. 2012 Jan;13(2):201-12. doi: 10.2217/pgs.11.179. Review. Erratum in: Pharmacogenomics. 2012 Apr;13(5):628.

PMID:
22256869
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Towards an interoperable information infrastructure providing decision support for genomic medicine.

Samwald M, Stenzhorn H, Dumontier M, Marshall MS, Luciano J, Adlassnig KP.

Stud Health Technol Inform. 2011;169:165-9.

PMID:
21893735
[PubMed - indexed for MEDLINE]
14.

The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside.

Luciano JS, Andersson B, Batchelor C, Bodenreider O, Clark T, Denney CK, Domarew C, Gambet T, Harland L, Jentzsch A, Kashyap V, Kos P, Kozlovsky J, Lebo T, Marshall SM, McCusker JP, McGuinness DL, Ogbuji C, Pichler E, Powers RL, Prud'hommeaux E, Samwald M, Schriml L, Tonellato PJ, Whetzel PL, Zhao J, Stephens S, Dumontier M.

J Biomed Semantics. 2011 May 17;2 Suppl 2:S1. doi: 10.1186/2041-1480-2-S2-S1.

PMID:
21624155
[PubMed]
Free PMC Article
15.

Linked open drug data for pharmaceutical research and development.

Samwald M, Jentzsch A, Bouton C, Kallesøe CS, Willighagen E, Hajagos J, Marshall MS, Prud'hommeaux E, Hassenzadeh O, Pichler E, Stephens S.

J Cheminform. 2011 May 16;3(1):19. doi: 10.1186/1758-2946-3-19.

PMID:
21575203
[PubMed]
Free PMC Article
16.

Integrating findings of traditional medicine with modern pharmaceutical research: the potential role of linked open data.

Samwald M, Dumontier M, Zhao J, Luciano JS, Marshall MS, Cheung K.

Chin Med. 2010 Dec 17;5:43. doi: 10.1186/1749-8546-5-43.

PMID:
21167050
[PubMed]
Free PMC Article
17.

The BioPAX community standard for pathway data sharing.

Demir E, Cary MP, Paley S, Fukuda K, Lemer C, Vastrik I, Wu G, D'Eustachio P, Schaefer C, Luciano J, Schacherer F, Martinez-Flores I, Hu Z, Jimenez-Jacinto V, Joshi-Tope G, Kandasamy K, Lopez-Fuentes AC, Mi H, Pichler E, Rodchenkov I, Splendiani A, Tkachev S, Zucker J, Gopinath G, Rajasimha H, Ramakrishnan R, Shah I, Syed M, Anwar N, Babur O, Blinov M, Brauner E, Corwin D, Donaldson S, Gibbons F, Goldberg R, Hornbeck P, Luna A, Murray-Rust P, Neumann E, Ruebenacker O, Samwald M, van Iersel M, Wimalaratne S, Allen K, Braun B, Whirl-Carrillo M, Cheung KH, Dahlquist K, Finney A, Gillespie M, Glass E, Gong L, Haw R, Honig M, Hubaut O, Kane D, Krupa S, Kutmon M, Leonard J, Marks D, Merberg D, Petri V, Pico A, Ravenscroft D, Ren L, Shah N, Sunshine M, Tang R, Whaley R, Letovksy S, Buetow KH, Rzhetsky A, Schachter V, Sobral BS, Dogrusoz U, McWeeney S, Aladjem M, Birney E, Collado-Vides J, Goto S, Hucka M, Le Novère N, Maltsev N, Pandey A, Thomas P, Wingender E, Karp PD, Sander C, Bader GD.

Nat Biotechnol. 2010 Sep;28(9):935-42. doi: 10.1038/nbt.1666. Epub 2010 Sep 9. Erratum in: Nat Biotechnol. 2010 Dec;28(12):1308. Nat Biotechnol. 2012 Apr;30(4):365. Reubenacker, Oliver [corrected to Ruebenacker, Oliver].

PMID:
20829833
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Structured digital tables on the Semantic Web: toward a structured digital literature.

Cheung KH, Samwald M, Auerbach RK, Gerstein MB.

Mol Syst Biol. 2010 Aug 24;6:403. doi: 10.1038/msb.2010.45.

PMID:
20739925
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Establishing a distributed system for the simple representation and integration of diverse scientific assertions.

Samwald M, Stenzhorn H.

J Biomed Semantics. 2010 Jun 22;1 Suppl 1:S5. doi: 10.1186/2041-1480-1-S1-S5.

PMID:
20626925
[PubMed]
Free PMC Article
20.

Semantic SenseLab: Implementing the vision of the Semantic Web in neuroscience.

Samwald M, Chen H, Ruttenberg A, Lim E, Marenco L, Miller P, Shepherd G, Cheung KH.

Artif Intell Med. 2010 Jan;48(1):21-8. doi: 10.1016/j.artmed.2009.11.003. Epub 2009 Dec 16.

PMID:
20006477
[PubMed - indexed for MEDLINE]
Free PMC Article

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