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A Population Genomics Insight into the Mediterranean Origins of Wine Yeast Domestication.

Almeida P, Barbosa R, Zalar P, Imanishi Y, Shimizu K, Turchetti B, Legras JL, Serra M, Dequin S, Couloux A, Guy J, Bensasson D, Gonçalves P, Sampaio JP.

Mol Ecol. 2015 Aug 6. doi: 10.1111/mec.13341. [Epub ahead of print]


Evolution of Mating Systems in Basidiomycetes and the Genetic Architecture Underlying Mating-Type Determination in the Yeast Leucosporidium scottii.

Maia TM, Lopes ST, Almeida JM, Rosa LH, Sampaio JP, Gonçalves P, Coelho MA.

Genetics. 2015 Jul 14. pii: genetics.115.177717. [Epub ahead of print]


Sex in the cold: taxonomic reorganization of psychrotolerant yeasts in the order Leucosporidiales.

de García V, Coelho MA, Maia TM, Rosa LH, Vaz AM, Rosa CA, Sampaio JP, Gonçalves P, van Broock M, Libkind D.

FEMS Yeast Res. 2015 Jun;15(4):fov019. doi: 10.1093/femsyr/fov019. Epub 2015 Apr 22.


The diversity and extracellular enzymatic activities of yeasts isolated from water tanks of Vriesea minarum, an endangered bromeliad species in Brazil, and the description of Occultifur brasiliensis f.a., sp. nov.

Gomes FC, Safar SV, Marques AR, Medeiros AO, Santos AR, Carvalho C, Lachance MA, Sampaio JP, Rosa CA.

Antonie Van Leeuwenhoek. 2015 Feb;107(2):597-611. doi: 10.1007/s10482-014-0356-4. Epub 2014 Dec 17.


Progressive loss of E-cadherin immunoexpression during cervical carcinogenesis.

Cavalcante JR, Sampaio JP, Maia Filho JT, Vieira RB, Eleutério J Jr, Lima RC Jr, Ribeiro RA, Almeida PR.

Acta Cir Bras. 2014 Oct;29(10):667-74.


Yeasts vectored by migratory birds collected in the Mediterranean island of Ustica and description of Phaffomyces usticensis f.a. sp. nov., a new species related to the cactus ecoclade.

Francesca N, Carvalho C, Sannino C, Guerreiro MA, Almeida PM, Settanni L, Massa B, Sampaio JP, Moschetti G.

FEMS Yeast Res. 2014 Sep;14(6):910-21. doi: 10.1111/1567-1364.12179. Epub 2014 Jul 28.


A Gondwanan imprint on global diversity and domestication of wine and cider yeast Saccharomyces uvarum.

Almeida P, Gonçalves C, Teixeira S, Libkind D, Bontrager M, Masneuf-Pomarède I, Albertin W, Durrens P, Sherman DJ, Marullo P, Hittinger CT, Gonçalves P, Sampaio JP.

Nat Commun. 2014 Jun 2;5:4044. doi: 10.1038/ncomms5044.


A handcrafted tissue microarray for a matrix arrangement of tissue samples.

Sampaio JP, Cavalcante JR, Furtado FN, Lima-Júnior RC, Ribeiro RA, Almeida PR.

J Pharmacol Toxicol Methods. 2014 Jul-Aug;70(1):70-2. doi: 10.1016/j.vascn.2014.05.005. Epub 2014 May 28.


Population structure and reticulate evolution of Saccharomyces eubayanus and its lager-brewing hybrids.

Peris D, Sylvester K, Libkind D, Gonçalves P, Sampaio JP, Alexander WG, Hittinger CT.

Mol Ecol. 2014 Apr;23(8):2031-45. doi: 10.1111/mec.12702. Epub 2014 Apr 3.


Local climatic adaptation in a widespread microorganism.

Leducq JB, Charron G, Samani P, Dubé AK, Sylvester K, James B, Almeida P, Sampaio JP, Hittinger CT, Bell G, Landry CR.

Proc Biol Sci. 2014 Jan 8;281(1777):20132472. doi: 10.1098/rspb.2013.2472. Print 2014 Feb 22.


Global distribution, diversity hot spots and niche transitions of an astaxanthin-producing eukaryotic microbe.

David-Palma M, Libkind D, Sampaio JP.

Mol Ecol. 2014 Feb;23(4):921-32. doi: 10.1111/mec.12642.


Wickerhamomyces sylviae f.a., sp. nov., an ascomycetous yeast species isolated from migratory birds.

Francesca N, Carvalho C, Almeida PM, Sannino C, Settanni L, Sampaio JP, Moschetti G.

Int J Syst Evol Microbiol. 2013 Dec;63(Pt 12):4824-30. doi: 10.1099/ijs.0.056382-0. Epub 2013 Oct 14.


Extensive intra-kingdom horizontal gene transfer converging on a fungal fructose transporter gene.

Coelho MA, Gonçalves C, Sampaio JP, Gonçalves P.

PLoS Genet. 2013 Jun;9(6):e1003587. doi: 10.1371/journal.pgen.1003587. Epub 2013 Jun 20.


Living and thriving on the skin: Malassezia genomes tell the story.

Coelho MA, Sampaio JP, Gonçalves P.

MBio. 2013 Mar 19;4(2):e00117-13. doi: 10.1128/mBio.00117-13.


Xanthophyllomyces dendrorhous (Phaffia rhodozyma) on stromata of Cyttaria hariotii in northwestern Patagonian Nothofagus forests.

Libkind D, Tognetti C, Ruffini A, Sampaio JP, Van Broock M.

Rev Argent Microbiol. 2011 Jul-Sep;43(3):226-32. doi: 10.1590/S0325-75412011000300011.


Evidence for maintenance of sex determinants but not of sexual stages in red yeasts, a group of early diverged basidiomycetes.

Coelho MA, Gonçalves P, Sampaio JP.

BMC Evol Biol. 2011 Aug 31;11:249. doi: 10.1186/1471-2148-11-249.


Microbe domestication and the identification of the wild genetic stock of lager-brewing yeast.

Libkind D, Hittinger CT, Valério E, Gonçalves C, Dover J, Johnston M, Gonçalves P, Sampaio JP.

Proc Natl Acad Sci U S A. 2011 Aug 30;108(35):14539-44. doi: 10.1073/pnas.1105430108. Epub 2011 Aug 22.


Phylogenetic distribution of fungal mycosporines within the Pucciniomycotina (Basidiomycota).

Libkind D, Moliné M, Sommaruga R, Sampaio JP, van Broock M.

Yeast. 2011 Aug;28(8):619-27. doi: 10.1002/yea.1891. Epub 2011 Jul 11.


Evidence for divergent evolution of growth temperature preference in sympatric Saccharomyces species.

Gonçalves P, Valério E, Correia C, de Almeida JM, Sampaio JP.

PLoS One. 2011;6(6):e20739. doi: 10.1371/journal.pone.0020739. Epub 2011 Jun 2.


Evidence of a significant role for Fas-mediated apoptosis in HCV clearance during pegylated interferon plus ribavirin combination therapy.

Schiavon LL, Narciso-Schiavon JL, Carvalho-Filho RJ, Sampaio JP, El Batah PN, Silva GA, Carvente CT, Silva AE, Ferraz ML.

Antivir Ther. 2011;16(3):291-8. doi: 10.3851/IMP1768.

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