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Results: 18

1.

The Medicago genome provides insight into the evolution of rhizobial symbioses.

Young ND, Debellé F, Oldroyd GE, Geurts R, Cannon SB, Udvardi MK, Benedito VA, Mayer KF, Gouzy J, Schoof H, Van de Peer Y, Proost S, Cook DR, Meyers BC, Spannagl M, Cheung F, De Mita S, Krishnakumar V, Gundlach H, Zhou S, Mudge J, Bharti AK, Murray JD, Naoumkina MA, Rosen B, Silverstein KA, Tang H, Rombauts S, Zhao PX, Zhou P, Barbe V, Bardou P, Bechner M, Bellec A, Berger A, Bergès H, Bidwell S, Bisseling T, Choisne N, Couloux A, Denny R, Deshpande S, Dai X, Doyle JJ, Dudez AM, Farmer AD, Fouteau S, Franken C, Gibelin C, Gish J, Goldstein S, González AJ, Green PJ, Hallab A, Hartog M, Hua A, Humphray SJ, Jeong DH, Jing Y, Jöcker A, Kenton SM, Kim DJ, Klee K, Lai H, Lang C, Lin S, Macmil SL, Magdelenat G, Matthews L, McCorrison J, Monaghan EL, Mun JH, Najar FZ, Nicholson C, Noirot C, O'Bleness M, Paule CR, Poulain J, Prion F, Qin B, Qu C, Retzel EF, Riddle C, Sallet E, Samain S, Samson N, Sanders I, Saurat O, Scarpelli C, Schiex T, Segurens B, Severin AJ, Sherrier DJ, Shi R, Sims S, Singer SR, Sinharoy S, Sterck L, Viollet A, Wang BB, Wang K, Wang M, Wang X, Warfsmann J, Weissenbach J, White DD, White JD, Wiley GB, Wincker P, Xing Y, Yang L, Yao Z, Ying F, Zhai J, Zhou L, Zuber A, Dénarié J, Dixon RA, May GD, Schwartz DC, Rogers J, Quétier F, Town CD, Roe BA.

Nature. 2011 Nov 16;480(7378):520-4. doi: 10.1038/nature10625.

PMID:
22089132
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Duplication and partitioning in evolution and function of homoeologous Q loci governing domestication characters in polyploid wheat.

Zhang Z, Belcram H, Gornicki P, Charles M, Just J, Huneau C, Magdelenat G, Couloux A, Samain S, Gill BS, Rasmussen JB, Barbe V, Faris JD, Chalhoub B.

Proc Natl Acad Sci U S A. 2011 Nov 15;108(46):18737-42. doi: 10.1073/pnas.1110552108. Epub 2011 Oct 31. Erratum in: Proc Natl Acad Sci U S A. 2012 Jan 24;109(4):1353.

PMID:
22042872
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Patterns of sequence divergence and evolution of the S orthologous regions between Asian and African cultivated rice species.

Guyot R, Garavito A, Gavory F, Samain S, Tohme J, Ghesquière A, Lorieux M.

PLoS One. 2011 Mar 10;6(3):e17726. doi: 10.1371/journal.pone.0017726.

PMID:
21423767
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane.

Garsmeur O, Charron C, Bocs S, Jouffe V, Samain S, Couloux A, Droc G, Zini C, Glaszmann JC, Van Sluys MA, D'Hont A.

New Phytol. 2011 Jan;189(2):629-42. doi: 10.1111/j.1469-8137.2010.03497.x. Epub 2010 Oct 29.

PMID:
21039564
[PubMed - indexed for MEDLINE]
5.

Analysis of virion structural components reveals vestiges of the ancestral ichnovirus genome.

Volkoff AN, Jouan V, Urbach S, Samain S, Bergoin M, Wincker P, Demettre E, Cousserans F, Provost B, Coulibaly F, Legeai F, Béliveau C, Cusson M, Gyapay G, Drezen JM.

PLoS Pathog. 2010 May 27;6(5):e1000923. doi: 10.1371/journal.ppat.1000923.

PMID:
20523890
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A genetic model for the female sterility barrier between Asian and African cultivated rice species.

Garavito A, Guyot R, Lozano J, Gavory F, Samain S, Panaud O, Tohme J, Ghesquière A, Lorieux M.

Genetics. 2010 Aug;185(4):1425-40. doi: 10.1534/genetics.110.116772. Epub 2010 May 10.

PMID:
20457876
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Symbiotic virus at the evolutionary intersection of three types of large DNA viruses; iridoviruses, ascoviruses, and ichnoviruses.

Bigot Y, Renault S, Nicolas J, Moundras C, Demattei MV, Samain S, Bideshi DK, Federici BA.

PLoS One. 2009 Jul 28;4(7):e6397. doi: 10.1371/journal.pone.0006397.

PMID:
19636425
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Features of the ancestral bilaterian inferred from Platynereis dumerilii ParaHox genes.

Hui JH, Raible F, Korchagina N, Dray N, Samain S, Magdelenat G, Jubin C, Segurens B, Balavoine G, Arendt D, Ferrier DE.

BMC Biol. 2009 Jul 23;7:43. doi: 10.1186/1741-7007-7-43.

PMID:
19627570
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

New insights into the origin of the B genome of hexaploid wheat: evolutionary relationships at the SPA genomic region with the S genome of the diploid relative Aegilops speltoides.

Salse J, Chagué V, Bolot S, Magdelenat G, Huneau C, Pont C, Belcram H, Couloux A, Gardais S, Evrard A, Segurens B, Charles M, Ravel C, Samain S, Charmet G, Boudet N, Chalhoub B.

BMC Genomics. 2008 Nov 25;9:555. doi: 10.1186/1471-2164-9-555.

PMID:
19032732
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Replication of nonautonomous retroelements in soybean appears to be both recent and common.

Wawrzynski A, Ashfield T, Chen NW, Mammadov J, Nguyen A, Podicheti R, Cannon SB, Thareau V, Ameline-Torregrosa C, Cannon E, Chacko B, Couloux A, Dalwani A, Denny R, Deshpande S, Egan AN, Glover N, Howell S, Ilut D, Lai H, Del Campo SM, Metcalf M, O'Bleness M, Pfeil BE, Ratnaparkhe MB, Samain S, Sanders I, Ségurens B, Sévignac M, Sherman-Broyles S, Tucker DM, Yi J, Doyle JJ, Geffroy V, Roe BA, Maroof MA, Young ND, Innes RW.

Plant Physiol. 2008 Dec;148(4):1760-71. doi: 10.1104/pp.108.127910. Epub 2008 Oct 24.

PMID:
18952860
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean.

Innes RW, Ameline-Torregrosa C, Ashfield T, Cannon E, Cannon SB, Chacko B, Chen NW, Couloux A, Dalwani A, Denny R, Deshpande S, Egan AN, Glover N, Hans CS, Howell S, Ilut D, Jackson S, Lai H, Mammadov J, Del Campo SM, Metcalf M, Nguyen A, O'Bleness M, Pfeil BE, Podicheti R, Ratnaparkhe MB, Samain S, Sanders I, Ségurens B, Sévignac M, Sherman-Broyles S, Thareau V, Tucker DM, Walling J, Wawrzynski A, Yi J, Doyle JJ, Geffroy V, Roe BA, Maroof MA, Young ND.

Plant Physiol. 2008 Dec;148(4):1740-59. doi: 10.1104/pp.108.127902. Epub 2008 Oct 8.

PMID:
18842825
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Molecular evidence for the evolution of ichnoviruses from ascoviruses by symbiogenesis.

Bigot Y, Samain S, Augé-Gouillou C, Federici BA.

BMC Evol Biol. 2008 Sep 18;8:253. doi: 10.1186/1471-2148-8-253.

PMID:
18801176
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Dynamics and differential proliferation of transposable elements during the evolution of the B and A genomes of wheat.

Charles M, Belcram H, Just J, Huneau C, Viollet A, Couloux A, Segurens B, Carter M, Huteau V, Coriton O, Appels R, Samain S, Chalhoub B.

Genetics. 2008 Oct;180(2):1071-86. doi: 10.1534/genetics.108.092304. Epub 2008 Sep 9.

PMID:
18780739
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Chaetognath transcriptome reveals ancestral and unique features among bilaterians.

Marlétaz F, Gilles A, Caubit X, Perez Y, Dossat C, Samain S, Gyapay G, Wincker P, Le Parco Y.

Genome Biol. 2008;9(6):R94. doi: 10.1186/gb-2008-9-6-r94. Epub 2008 Jun 4.

PMID:
18533022
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The Dogfish Scyliorhinus canicula: A Reference in Jawed Vertebrates.

Coolen M, Menuet A, Chassoux D, Compagnucci C, Henry S, Lévèque L, Da Silva C, Gavory F, Samain S, Wincker P, Thermes C, D'Aubenton-Carafa Y, Rodriguez-Moldes I, Naylor G, Depew M, Sourdaine P, Mazan S.

CSH Protoc. 2008 Dec 1;2008:pdb.emo111. doi: 10.1101/pdb.emo111.

PMID:
21356737
[PubMed]
16.

Bacteriophage prevalence in the genus Azospirillum and analysis of the first genome sequence of an Azospirillum brasilense integrative phage.

Boyer M, Haurat J, Samain S, Segurens B, Gavory F, González V, Mavingui P, Rohr R, Bally R, Wisniewski-Dyé F.

Appl Environ Microbiol. 2008 Feb;74(3):861-74. Epub 2007 Dec 7.

PMID:
18065619
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

The Xist RNA gene evolved in eutherians by pseudogenization of a protein-coding gene.

Duret L, Chureau C, Samain S, Weissenbach J, Avner P.

Science. 2006 Jun 16;312(5780):1653-5.

PMID:
16778056
[PubMed - indexed for MEDLINE]
Free Article
18.

The DNA sequence and analysis of human chromosome 14.

Heilig R, Eckenberg R, Petit JL, Fonknechten N, Da Silva C, Cattolico L, Levy M, Barbe V, de Berardinis V, Ureta-Vidal A, Pelletier E, Vico V, Anthouard V, Rowen L, Madan A, Qin S, Sun H, Du H, Pepin K, Artiguenave F, Robert C, Cruaud C, Brüls T, Jaillon O, Friedlander L, Samson G, Brottier P, Cure S, Ségurens B, Anière F, Samain S, Crespeau H, Abbasi N, Aiach N, Boscus D, Dickhoff R, Dors M, Dubois I, Friedman C, Gouyvenoux M, James R, Madan A, Mairey-Estrada B, Mangenot S, Martins N, Ménard M, Oztas S, Ratcliffe A, Shaffer T, Trask B, Vacherie B, Bellemere C, Belser C, Besnard-Gonnet M, Bartol-Mavel D, Boutard M, Briez-Silla S, Combette S, Dufossé-Laurent V, Ferron C, Lechaplais C, Louesse C, Muselet D, Magdelenat G, Pateau E, Petit E, Sirvain-Trukniewicz P, Trybou A, Vega-Czarny N, Bataille E, Bluet E, Bordelais I, Dubois M, Dumont C, Guérin T, Haffray S, Hammadi R, Muanga J, Pellouin V, Robert D, Wunderle E, Gauguet G, Roy A, Sainte-Marthe L, Verdier J, Verdier-Discala C, Hillier L, Fulton L, McPherson J, Matsuda F, Wilson R, Scarpelli C, Gyapay G, Wincker P, Saurin W, Quétier F, Waterston R, Hood L, Weissenbach J.

Nature. 2003 Feb 6;421(6923):601-7. Epub 2003 Jan 1.

PMID:
12508121
[PubMed - indexed for MEDLINE]

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