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Results: 1 to 20 of 43

1.

The genome of Eucalyptus grandis.

Myburg AA, Grattapaglia D, Tuskan GA, Hellsten U, Hayes RD, Grimwood J, Jenkins J, Lindquist E, Tice H, Bauer D, Goodstein DM, Dubchak I, Poliakov A, Mizrachi E, Kullan AR, Hussey SG, Pinard D, van der Merwe K, Singh P, van Jaarsveld I, Silva-Junior OB, Togawa RC, Pappas MR, Faria DA, Sansaloni CP, Petroli CD, Yang X, Ranjan P, Tschaplinski TJ, Ye CY, Li T, Sterck L, Vanneste K, Murat F, Soler M, Clemente HS, Saidi N, Cassan-Wang H, Dunand C, Hefer CA, Bornberg-Bauer E, Kersting AR, Vining K, Amarasinghe V, Ranik M, Naithani S, Elser J, Boyd AE, Liston A, Spatafora JW, Dharmwardhana P, Raja R, Sullivan C, Romanel E, Alves-Ferreira M, Külheim C, Foley W, Carocha V, Paiva J, Kudrna D, Brommonschenkel SH, Pasquali G, Byrne M, Rigault P, Tibbits J, Spokevicius A, Jones RC, Steane DA, Vaillancourt RE, Potts BM, Joubert F, Barry K, Pappas GJ, Strauss SH, Jaiswal P, Grima-Pettenati J, Salse J, Van de Peer Y, Rokhsar DS, Schmutz J.

Nature. 2014 Jun 19;510(7505):356-62. doi: 10.1038/nature13308. Epub 2014 Jun 11.

PMID:
24919147
[PubMed - indexed for MEDLINE]
2.

Genetic and molecular bases of yield-associated traits: a translational biology approach between rice and wheat.

Valluru R, Reynolds MP, Salse J.

Theor Appl Genet. 2014 Jul;127(7):1463-89. doi: 10.1007/s00122-014-2332-9. Epub 2014 Jun 10.

PMID:
24913362
[PubMed - in process]
3.

Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication.

Wu GA, Prochnik S, Jenkins J, Salse J, Hellsten U, Murat F, Perrier X, Ruiz M, Scalabrin S, Terol J, Takita MA, Labadie K, Poulain J, Couloux A, Jabbari K, Cattonaro F, Del Fabbro C, Pinosio S, Zuccolo A, Chapman J, Grimwood J, Tadeo FR, Estornell LH, Muñoz-Sanz JV, Ibanez V, Herrero-Ortega A, Aleza P, Pérez-Pérez J, Ramón D, Brunel D, Luro F, Chen C, Farmerie WG, Desany B, Kodira C, Mohiuddin M, Harkins T, Fredrikson K, Burns P, Lomsadze A, Borodovsky M, Reforgiato G, Freitas-Astúa J, Quetier F, Navarro L, Roose M, Wincker P, Schmutz J, Morgante M, Machado MA, Talon M, Jaillon O, Ollitrault P, Gmitter F, Rokhsar D.

Nat Biotechnol. 2014 Jul;32(7):656-62. doi: 10.1038/nbt.2906. Epub 2014 Jun 8.

PMID:
24908277
[PubMed - in process]
4.

Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array.

Wang S, Wong D, Forrest K, Allen A, Chao S, Huang BE, Maccaferri M, Salvi S, Milner SG, Cattivelli L, Mastrangelo AM, Whan A, Stephen S, Barker G, Wieseke R, Plieske J; International Wheat Genome Sequencing Consortium, Lillemo M, Mather D, Appels R, Dolferus R, Brown-Guedira G, Korol A, Akhunova AR, Feuillet C, Salse J, Morgante M, Pozniak C, Luo MC, Dvorak J, Morell M, Dubcovsky J, Ganal M, Tuberosa R, Lawley C, Mikoulitch I, Cavanagh C, Edwards KJ, Hayden M, Akhunov E.

Plant Biotechnol J. 2014 Mar 20. doi: 10.1111/pbi.12183. [Epub ahead of print]

PMID:
24646323
[PubMed - as supplied by publisher]
5.

Paleo-evolutionary plasticity of plant disease resistance genes.

Zhang R, Murat F, Pont C, Langin T, Salse J.

BMC Genomics. 2014 Mar 12;15:187. doi: 10.1186/1471-2164-15-187.

PMID:
24617999
[PubMed - in process]
Free Article
6.

Shared subgenome dominance following polyploidization explains grass genome evolutionary plasticity from a seven protochromosome ancestor with 16K protogenes.

Murat F, Zhang R, Guizard S, Flores R, Armero A, Pont C, Steinbach D, Quesneville H, Cooke R, Salse J.

Genome Biol Evol. 2014 Jan;6(1):12-33. doi: 10.1093/gbe/evt200.

PMID:
24317974
[PubMed - in process]
Free PMC Article
7.

Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo- and neoduplicated subgenomes.

Pont C, Murat F, Guizard S, Flores R, Foucrier S, Bidet Y, Quraishi UM, Alaux M, Doležel J, Fahima T, Budak H, Keller B, Salvi S, Maccaferri M, Steinbach D, Feuillet C, Quesneville H, Salse J.

Plant J. 2013 Dec;76(6):1030-44. doi: 10.1111/tpj.12366. Epub 2013 Nov 29.

PMID:
24164652
[PubMed - in process]
8.

The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions.

Guo S, Zhang J, Sun H, Salse J, Lucas WJ, Zhang H, Zheng Y, Mao L, Ren Y, Wang Z, Min J, Guo X, Murat F, Ham BK, Zhang Z, Gao S, Huang M, Xu Y, Zhong S, Bombarely A, Mueller LA, Zhao H, He H, Zhang Y, Zhang Z, Huang S, Tan T, Pang E, Lin K, Hu Q, Kuang H, Ni P, Wang B, Liu J, Kou Q, Hou W, Zou X, Jiang J, Gong G, Klee K, Schoof H, Huang Y, Hu X, Dong S, Liang D, Wang J, Wu K, Xia Y, Zhao X, Zheng Z, Xing M, Liang X, Huang B, Lv T, Wang J, Yin Y, Yi H, Li R, Wu M, Levi A, Zhang X, Giovannoni JJ, Wang J, Li Y, Fei Z, Xu Y.

Nat Genet. 2013 Jan;45(1):51-8. doi: 10.1038/ng.2470. Epub 2012 Nov 25.

PMID:
23179023
[PubMed - indexed for MEDLINE]
9.

Identification of glycosyltransferases involved in cell wall synthesis of wheat endosperm.

Suliman M, Chateigner-Boutin AL, Francin-Allami M, Partier A, Bouchet B, Salse J, Pont C, Marion J, Rogniaux H, Tessier D, Guillon F, Larré C.

J Proteomics. 2013 Jan 14;78:508-21. doi: 10.1016/j.jprot.2012.10.021. Epub 2012 Nov 2.

PMID:
23128297
[PubMed - indexed for MEDLINE]
10.

Comparative mapping in the Fagaceae and beyond with EST-SSRs.

Bodénès C, Chancerel E, Gailing O, Vendramin GG, Bagnoli F, Durand J, Goicoechea PG, Soliani C, Villani F, Mattioni C, Koelewijn HP, Murat F, Salse J, Roussel G, Boury C, Alberto F, Kremer A, Plomion C.

BMC Plant Biol. 2012 Aug 29;12:153. doi: 10.1186/1471-2229-12-153.

PMID:
22931513
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Decoding plant and animal genome plasticity from differential paleo-evolutionary patterns and processes.

Murat F, Van de Peer Y, Salse J.

Genome Biol Evol. 2012;4(9):917-28. doi: 10.1093/gbe/evs066. Epub 2012 Jul 24.

PMID:
22833223
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Deciphering the genomic structure, function and evolution of carotenogenesis related phytoene synthases in grasses.

Dibari B, Murat F, Chosson A, Gautier V, Poncet C, Lecomte P, Mercier I, Bergès H, Pont C, Blanco A, Salse J.

BMC Genomics. 2012 Jun 6;13:221. doi: 10.1186/1471-2164-13-221.

PMID:
22672222
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Grass microRNA gene paleohistory unveils new insights into gene dosage balance in subgenome partitioning after whole-genome duplication.

Abrouk M, Zhang R, Murat F, Li A, Pont C, Mao L, Salse J.

Plant Cell. 2012 May;24(5):1776-92. doi: 10.1105/tpc.112.095752. Epub 2012 May 15.

PMID:
22589464
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Translational Genomics in Legumes Allowed Placing In Silico 5460 Unigenes on the Pea Functional Map and Identified Candidate Genes in Pisum sativum L.

Bordat A, Savois V, Nicolas M, Salse J, Chauveau A, Bourgeois M, Potier J, Houtin H, Rond C, Murat F, Marget P, Aubert G, Burstin J.

G3 (Bethesda). 2011 Jul;1(2):93-103. doi: 10.1534/g3.111.000349. Epub 2011 Jul 1.

PMID:
22384322
[PubMed]
Free PMC Article
15.

In silico archeogenomics unveils modern plant genome organisation, regulation and evolution.

Salse J.

Curr Opin Plant Biol. 2012 Apr;15(2):122-30. doi: 10.1016/j.pbi.2012.01.001. Epub 2012 Jan 24. Review.

PMID:
22280839
[PubMed - indexed for MEDLINE]
16.

RNA-seq in grain unveils fate of neo- and paleopolyploidization events in bread wheat (Triticum aestivum L.).

Pont C, Murat F, Confolent C, Balzergue S, Salse J.

Genome Biol. 2011 Dec 2;12(12):R119. doi: 10.1186/gb-2011-12-12-r119.

PMID:
22136458
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Microsatellite mapping of Ae. speltoides and map-based comparative analysis of the S, G, and B genomes of Triticeae species.

Dobrovolskaya O, Boeuf C, Salse J, Pont C, Sourdille P, Bernard M, Salina E.

Theor Appl Genet. 2011 Nov;123(7):1145-57. doi: 10.1007/s00122-011-1655-z. Epub 2011 Jul 27.

PMID:
21792632
[PubMed - indexed for MEDLINE]
18.

Mapping ancestral genomes with massive gene loss: a matrix sandwich problem.

Gavranović H, Chauve C, Salse J, Tannier E.

Bioinformatics. 2011 Jul 1;27(13):i257-65. doi: 10.1093/bioinformatics/btr224.

PMID:
21685079
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Unlocking the barley genome by chromosomal and comparative genomics.

Mayer KF, Martis M, Hedley PE, Simková H, Liu H, Morris JA, Steuernagel B, Taudien S, Roessner S, Gundlach H, Kubaláková M, Suchánková P, Murat F, Felder M, Nussbaumer T, Graner A, Salse J, Endo T, Sakai H, Tanaka T, Itoh T, Sato K, Platzer M, Matsumoto T, Scholz U, Dolezel J, Waugh R, Stein N.

Plant Cell. 2011 Apr;23(4):1249-63. doi: 10.1105/tpc.110.082537. Epub 2011 Apr 5.

PMID:
21467582
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Palaeogenomics in cereals: modeling of ancestors for modern species improvement.

Salse J, Feuillet C.

C R Biol. 2011 Mar;334(3):205-11. doi: 10.1016/j.crvi.2010.12.014. Epub 2011 Jan 31. Review.

PMID:
21377615
[PubMed - indexed for MEDLINE]

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