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Results: 1 to 20 of 49

1.

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Plomion C, Aury JM, Amselem J, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Boudet N, Boury C, Canaguier A, Couloux A, Da Silva C, Duplessis S, Ehrenmann F, Estrada-Mairey B, Fouteau S, Francillonne N, Gaspin C, Guichard C, Klopp C, Labadie K, Lalanne C, Le Clainche I, Leplé JC, Le Provost G, Leroy T, Lesur I, Martin F, Mercier J, Michotey C, Murat F, Salin F, Steinbach D, Faivre-Rampant P, Wincker P, Salse J, Quesneville H, Kremer A.

Mol Ecol Resour. 2015 May 6. doi: 10.1111/1755-0998.12425. [Epub ahead of print]

PMID:
25944057
2.

The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release.

Lesur I, Le Provost G, Bento P, Da Silva C, Leplé JC, Murat F, Ueno S, Bartholomé J, Lalanne C, Ehrenmann F, Noirot C, Burban C, Léger V, Amselem J, Belser C, Quesneville H, Stierschneider M, Fluch S, Feldhahn L, Tarkka M, Herrmann S, Buscot F, Klopp C, Kremer A, Salse J, Aury JM, Plomion C.

BMC Genomics. 2015 Feb 21;16:112. doi: 10.1186/s12864-015-1331-9.

3.

Karyotype and gene order evolution from reconstructed extinct ancestors highlight contrasts in genome plasticity of modern rosid crops.

Murat F, Zhang R, Guizard S, Gavranović H, Flores R, Steinbach D, Quesneville H, Tannier E, Salse J.

Genome Biol Evol. 2015 Jan 29;7(3):735-49. doi: 10.1093/gbe/evv014.

4.

GenomicusPlants: a web resource to study genome evolution in flowering plants.

Louis A, Murat F, Salse J, Crollius HR.

Plant Cell Physiol. 2015 Jan;56(1):e4. doi: 10.1093/pcp/pcu177. Epub 2014 Nov 27.

5.

FRIZZY PANICLE drives supernumerary spikelets in bread wheat.

Dobrovolskaya O, Pont C, Sibout R, Martinek P, Badaeva E, Murat F, Chosson A, Watanabe N, Prat E, Gautier N, Gautier V, Poncet C, Orlov YL, Krasnikov AA, Bergès H, Salina E, Laikova L, Salse J.

Plant Physiol. 2015 Jan;167(1):189-99. doi: 10.1104/pp.114.250043. Epub 2014 Nov 14.

PMID:
25398545
6.

A perspective from drug user organisations on 'ECDC and EMCDDA guidance: prevention and control of infectious diseases among people who inject drugs'.

Corbacho A, Rivera M, Trujillo F, Martí M, Carbonell J, Fernández F, Rosselló A, Perramon J, Salse J, Ramos I.

BMC Infect Dis. 2014;14 Suppl 6:S10. doi: 10.1186/1471-2334-14-S6-S10. Epub 2014 Sep 19. No abstract available.

7.

The genome of Eucalyptus grandis.

Myburg AA, Grattapaglia D, Tuskan GA, Hellsten U, Hayes RD, Grimwood J, Jenkins J, Lindquist E, Tice H, Bauer D, Goodstein DM, Dubchak I, Poliakov A, Mizrachi E, Kullan AR, Hussey SG, Pinard D, van der Merwe K, Singh P, van Jaarsveld I, Silva-Junior OB, Togawa RC, Pappas MR, Faria DA, Sansaloni CP, Petroli CD, Yang X, Ranjan P, Tschaplinski TJ, Ye CY, Li T, Sterck L, Vanneste K, Murat F, Soler M, Clemente HS, Saidi N, Cassan-Wang H, Dunand C, Hefer CA, Bornberg-Bauer E, Kersting AR, Vining K, Amarasinghe V, Ranik M, Naithani S, Elser J, Boyd AE, Liston A, Spatafora JW, Dharmwardhana P, Raja R, Sullivan C, Romanel E, Alves-Ferreira M, Külheim C, Foley W, Carocha V, Paiva J, Kudrna D, Brommonschenkel SH, Pasquali G, Byrne M, Rigault P, Tibbits J, Spokevicius A, Jones RC, Steane DA, Vaillancourt RE, Potts BM, Joubert F, Barry K, Pappas GJ, Strauss SH, Jaiswal P, Grima-Pettenati J, Salse J, Van de Peer Y, Rokhsar DS, Schmutz J.

Nature. 2014 Jun 19;510(7505):356-62. doi: 10.1038/nature13308. Epub 2014 Jun 11.

PMID:
24919147
8.

Genetic and molecular bases of yield-associated traits: a translational biology approach between rice and wheat.

Valluru R, Reynolds MP, Salse J.

Theor Appl Genet. 2014 Jul;127(7):1463-89. doi: 10.1007/s00122-014-2332-9. Epub 2014 Jun 10. Review.

PMID:
24913362
9.

Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication.

Wu GA, Prochnik S, Jenkins J, Salse J, Hellsten U, Murat F, Perrier X, Ruiz M, Scalabrin S, Terol J, Takita MA, Labadie K, Poulain J, Couloux A, Jabbari K, Cattonaro F, Del Fabbro C, Pinosio S, Zuccolo A, Chapman J, Grimwood J, Tadeo FR, Estornell LH, Muñoz-Sanz JV, Ibanez V, Herrero-Ortega A, Aleza P, Pérez-Pérez J, Ramón D, Brunel D, Luro F, Chen C, Farmerie WG, Desany B, Kodira C, Mohiuddin M, Harkins T, Fredrikson K, Burns P, Lomsadze A, Borodovsky M, Reforgiato G, Freitas-Astúa J, Quetier F, Navarro L, Roose M, Wincker P, Schmutz J, Morgante M, Machado MA, Talon M, Jaillon O, Ollitrault P, Gmitter F, Rokhsar D.

Nat Biotechnol. 2014 Jul;32(7):656-62. doi: 10.1038/nbt.2906. Epub 2014 Jun 8.

10.

Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array.

Wang S, Wong D, Forrest K, Allen A, Chao S, Huang BE, Maccaferri M, Salvi S, Milner SG, Cattivelli L, Mastrangelo AM, Whan A, Stephen S, Barker G, Wieseke R, Plieske J; International Wheat Genome Sequencing Consortium, Lillemo M, Mather D, Appels R, Dolferus R, Brown-Guedira G, Korol A, Akhunova AR, Feuillet C, Salse J, Morgante M, Pozniak C, Luo MC, Dvorak J, Morell M, Dubcovsky J, Ganal M, Tuberosa R, Lawley C, Mikoulitch I, Cavanagh C, Edwards KJ, Hayden M, Akhunov E.

Plant Biotechnol J. 2014 Aug;12(6):787-96. doi: 10.1111/pbi.12183. Epub 2014 Mar 20.

11.

Paleo-evolutionary plasticity of plant disease resistance genes.

Zhang R, Murat F, Pont C, Langin T, Salse J.

BMC Genomics. 2014 Mar 12;15:187. doi: 10.1186/1471-2164-15-187.

12.

Shared subgenome dominance following polyploidization explains grass genome evolutionary plasticity from a seven protochromosome ancestor with 16K protogenes.

Murat F, Zhang R, Guizard S, Flores R, Armero A, Pont C, Steinbach D, Quesneville H, Cooke R, Salse J.

Genome Biol Evol. 2014 Jan;6(1):12-33. doi: 10.1093/gbe/evt200.

13.

Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo- and neoduplicated subgenomes.

Pont C, Murat F, Guizard S, Flores R, Foucrier S, Bidet Y, Quraishi UM, Alaux M, Doležel J, Fahima T, Budak H, Keller B, Salvi S, Maccaferri M, Steinbach D, Feuillet C, Quesneville H, Salse J.

Plant J. 2013 Dec;76(6):1030-44. doi: 10.1111/tpj.12366. Epub 2013 Nov 29.

PMID:
24164652
14.

The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions.

Guo S, Zhang J, Sun H, Salse J, Lucas WJ, Zhang H, Zheng Y, Mao L, Ren Y, Wang Z, Min J, Guo X, Murat F, Ham BK, Zhang Z, Gao S, Huang M, Xu Y, Zhong S, Bombarely A, Mueller LA, Zhao H, He H, Zhang Y, Zhang Z, Huang S, Tan T, Pang E, Lin K, Hu Q, Kuang H, Ni P, Wang B, Liu J, Kou Q, Hou W, Zou X, Jiang J, Gong G, Klee K, Schoof H, Huang Y, Hu X, Dong S, Liang D, Wang J, Wu K, Xia Y, Zhao X, Zheng Z, Xing M, Liang X, Huang B, Lv T, Wang J, Yin Y, Yi H, Li R, Wu M, Levi A, Zhang X, Giovannoni JJ, Wang J, Li Y, Fei Z, Xu Y.

Nat Genet. 2013 Jan;45(1):51-8. doi: 10.1038/ng.2470. Epub 2012 Nov 25.

PMID:
23179023
15.

Identification of glycosyltransferases involved in cell wall synthesis of wheat endosperm.

Suliman M, Chateigner-Boutin AL, Francin-Allami M, Partier A, Bouchet B, Salse J, Pont C, Marion J, Rogniaux H, Tessier D, Guillon F, Larré C.

J Proteomics. 2013 Jan 14;78:508-21. doi: 10.1016/j.jprot.2012.10.021. Epub 2012 Nov 2.

PMID:
23128297
16.

Comparative mapping in the Fagaceae and beyond with EST-SSRs.

Bodénès C, Chancerel E, Gailing O, Vendramin GG, Bagnoli F, Durand J, Goicoechea PG, Soliani C, Villani F, Mattioni C, Koelewijn HP, Murat F, Salse J, Roussel G, Boury C, Alberto F, Kremer A, Plomion C.

BMC Plant Biol. 2012 Aug 29;12:153. doi: 10.1186/1471-2229-12-153.

17.

Decoding plant and animal genome plasticity from differential paleo-evolutionary patterns and processes.

Murat F, Van de Peer Y, Salse J.

Genome Biol Evol. 2012;4(9):917-28. doi: 10.1093/gbe/evs066. Epub 2012 Jul 24.

18.

Deciphering the genomic structure, function and evolution of carotenogenesis related phytoene synthases in grasses.

Dibari B, Murat F, Chosson A, Gautier V, Poncet C, Lecomte P, Mercier I, Bergès H, Pont C, Blanco A, Salse J.

BMC Genomics. 2012 Jun 6;13:221. doi: 10.1186/1471-2164-13-221.

19.

Grass microRNA gene paleohistory unveils new insights into gene dosage balance in subgenome partitioning after whole-genome duplication.

Abrouk M, Zhang R, Murat F, Li A, Pont C, Mao L, Salse J.

Plant Cell. 2012 May;24(5):1776-92. doi: 10.1105/tpc.112.095752. Epub 2012 May 15.

20.

Translational Genomics in Legumes Allowed Placing In Silico 5460 Unigenes on the Pea Functional Map and Identified Candidate Genes in Pisum sativum L.

Bordat A, Savois V, Nicolas M, Salse J, Chauveau A, Bourgeois M, Potier J, Houtin H, Rond C, Murat F, Marget P, Aubert G, Burstin J.

G3 (Bethesda). 2011 Jul;1(2):93-103. doi: 10.1534/g3.111.000349. Epub 2011 Jul 1.

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