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Results: 1 to 20 of 21

1.

Tipping elements in the human intestinal ecosystem.

Lahti L, Salojärvi J, Salonen A, Scheffer M, de Vos WM.

Nat Commun. 2014 Jul 8;5:4344. doi: 10.1038/ncomms5344.

PMID:
25003530
[PubMed - in process]
Free PMC Article
2.

Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men.

Salonen A, Lahti L, Salojärvi J, Holtrop G, Korpela K, Duncan SH, Date P, Farquharson F, Johnstone AM, Lobley GE, Louis P, Flint HJ, de Vos WM.

ISME J. 2014 Apr 24. doi: 10.1038/ismej.2014.63. [Epub ahead of print]

PMID:
24763370
[PubMed - as supplied by publisher]
3.

Transcriptomics and functional genomics of ROS-induced cell death regulation by RADICAL-INDUCED CELL DEATH1.

Brosché M, Blomster T, Salojärvi J, Cui F, Sipari N, Leppälä J, Lamminmäki A, Tomai G, Narayanasamy S, Reddy RA, Keinänen M, Overmyer K, Kangasjärvi J.

PLoS Genet. 2014 Feb 13;10(2):e1004112. doi: 10.1371/journal.pgen.1004112. eCollection 2014 Feb.

PMID:
24550736
[PubMed - in process]
Free PMC Article
4.

The Arabidopsis thaliana cysteine-rich receptor-like kinases CRK6 and CRK7 protect against apoplastic oxidative stress.

Idänheimo N, Gauthier A, Salojärvi J, Siligato R, Brosché M, Kollist H, Mähönen AP, Kangasjärvi J, Wrzaczek M.

Biochem Biophys Res Commun. 2014 Mar 7;445(2):457-62. doi: 10.1016/j.bbrc.2014.02.013. Epub 2014 Feb 12.

PMID:
24530916
[PubMed - indexed for MEDLINE]
5.

Faecal microbiota composition and host-microbe cross-talk following gastroenteritis and in postinfectious irritable bowel syndrome.

Jalanka-Tuovinen J, Salojärvi J, Salonen A, Immonen O, Garsed K, Kelly FM, Zaitoun A, Palva A, Spiller RC, de Vos WM.

Gut. 2013 Dec 5. doi: 10.1136/gutjnl-2013-305994. [Epub ahead of print]

PMID:
24310267
[PubMed - as supplied by publisher]
6.

Duodenal microbiota composition and mucosal homeostasis in pediatric celiac disease.

Cheng J, Kalliomäki M, Heilig HG, Palva A, Lähteenoja H, de Vos WM, Salojärvi J, Satokari R.

BMC Gastroenterol. 2013 Jul 11;13:113. doi: 10.1186/1471-230X-13-113.

PMID:
23844808
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Intestinal microbiota in healthy U.S. young children and adults--a high throughput microarray analysis.

Ringel-Kulka T, Cheng J, Ringel Y, Salojärvi J, Carroll I, Palva A, de Vos WM, Satokari R.

PLoS One. 2013 May 23;8(5):e64315. doi: 10.1371/journal.pone.0064315. Print 2013.

PMID:
23717595
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data.

Lahti L, Salonen A, Kekkonen RA, Salojärvi J, Jalanka-Tuovinen J, Palva A, Orešič M, de Vos WM.

PeerJ. 2013 Feb 26;1:e32. doi: 10.7717/peerj.32. Print 2013.

PMID:
23638368
[PubMed]
Free PMC Article
9.

Genome sequencing of the plant pathogen Taphrina deformans, the causal agent of peach leaf curl.

Cissé OH, Almeida JM, Fonseca A, Kumar AA, Salojärvi J, Overmyer K, Hauser PM, Pagni M.

MBio. 2013 Apr 30;4(3):e00055-13. doi: 10.1128/mBio.00055-13.

PMID:
23631913
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Intake of whole-grain and fiber-rich rye bread versus refined wheat bread does not differentiate intestinal microbiota composition in Finnish adults with metabolic syndrome.

Lappi J, Salojärvi J, Kolehmainen M, Mykkänen H, Poutanen K, de Vos WM, Salonen A.

J Nutr. 2013 May;143(5):648-55. doi: 10.3945/jn.112.172668. Epub 2013 Mar 20.

PMID:
23514765
[PubMed - indexed for MEDLINE]
Free Article
11.

Apoplastic and chloroplastic redox signaling networks in plant stress responses.

Sierla M, Rahikainen M, Salojärvi J, Kangasjärvi J, Kangasjärvi S.

Antioxid Redox Signal. 2013 Jun 1;18(16):2220-39. doi: 10.1089/ars.2012.5016. Epub 2013 Jan 8.

PMID:
23157163
[PubMed - indexed for MEDLINE]
12.

Targeted retrieval of gene expression measurements using regulatory models.

Georgii E, Salojärvi J, Brosché M, Kangasjärvi J, Kaski S.

Bioinformatics. 2012 Sep 15;28(18):2349-56. Epub 2012 Jun 27.

PMID:
22743225
[PubMed - indexed for MEDLINE]
Free Article
13.

Transfer of intestinal microbiota from lean donors increases insulin sensitivity in individuals with metabolic syndrome.

Vrieze A, Van Nood E, Holleman F, Salojärvi J, Kootte RS, Bartelsman JF, Dallinga-Thie GM, Ackermans MT, Serlie MJ, Oozeer R, Derrien M, Druesne A, Van Hylckama Vlieg JE, Bloks VW, Groen AK, Heilig HG, Zoetendal EG, Stroes ES, de Vos WM, Hoekstra JB, Nieuwdorp M.

Gastroenterology. 2012 Oct;143(4):913-6.e7. doi: 10.1053/j.gastro.2012.06.031. Epub 2012 Jun 20. Erratum in: Gastroenterology. 2013 Jan;144(1):250.

PMID:
22728514
[PubMed - indexed for MEDLINE]
14.

The adult intestinal core microbiota is determined by analysis depth and health status.

Salonen A, Salojärvi J, Lahti L, de Vos WM.

Clin Microbiol Infect. 2012 Jul;18 Suppl 4:16-20. doi: 10.1111/j.1469-0691.2012.03855.x.

PMID:
22647042
[PubMed - indexed for MEDLINE]
15.

Comparative metaproteomics and diversity analysis of human intestinal microbiota testifies for its temporal stability and expression of core functions.

Kolmeder CA, de Been M, Nikkilä J, Ritamo I, Mättö J, Valmu L, Salojärvi J, Palva A, Salonen A, de Vos WM.

PLoS One. 2012;7(1):e29913. doi: 10.1371/journal.pone.0029913. Epub 2012 Jan 18.

PMID:
22279554
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Apoplastic reactive oxygen species transiently decrease auxin signaling and cause stress-induced morphogenic response in Arabidopsis.

Blomster T, Salojärvi J, Sipari N, Brosché M, Ahlfors R, Keinänen M, Overmyer K, Kangasjärvi J.

Plant Physiol. 2011 Dec;157(4):1866-83. doi: 10.1104/pp.111.181883. Epub 2011 Oct 17.

PMID:
22007024
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Transcriptional regulation of the CRK/DUF26 group of receptor-like protein kinases by ozone and plant hormones in Arabidopsis.

Wrzaczek M, Brosché M, Salojärvi J, Kangasjärvi S, Idänheimo N, Mersmann S, Robatzek S, Karpiński S, Karpińska B, Kangasjärvi J.

BMC Plant Biol. 2010 May 25;10:95. doi: 10.1186/1471-2229-10-95.

PMID:
20500828
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The RST and PARP-like domain containing SRO protein family: analysis of protein structure, function and conservation in land plants.

Jaspers P, Overmyer K, Wrzaczek M, Vainonen JP, Blomster T, Salojärvi J, Reddy RA, Kangasjärvi J.

BMC Genomics. 2010 Mar 12;11:170. doi: 10.1186/1471-2164-11-170.

PMID:
20226034
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Ozone-triggered rapid stomatal response involves the production of reactive oxygen species, and is controlled by SLAC1 and OST1.

Vahisalu T, Puzõrjova I, Brosché M, Valk E, Lepiku M, Moldau H, Pechter P, Wang YS, Lindgren O, Salojärvi J, Loog M, Kangasjärvi J, Kollist H.

Plant J. 2010 May;62(3):442-53. doi: 10.1111/j.1365-313X.2010.04159.x. Epub 2010 Feb 1.

PMID:
20128877
[PubMed - indexed for MEDLINE]
20.

Unequally redundant RCD1 and SRO1 mediate stress and developmental responses and interact with transcription factors.

Jaspers P, Blomster T, Brosché M, Salojärvi J, Ahlfors R, Vainonen JP, Reddy RA, Immink R, Angenent G, Turck F, Overmyer K, Kangasjärvi J.

Plant J. 2009 Oct;60(2):268-79. doi: 10.1111/j.1365-313X.2009.03951.x. Epub 2009 Jun 22.

PMID:
19548978
[PubMed - indexed for MEDLINE]

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