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Results: 19

1.

BioCreative III interactive task: an overview.

Arighi CN, Roberts PM, Agarwal S, Bhattacharya S, Cesareni G, Chatr-Aryamontri A, Clematide S, Gaudet P, Giglio MG, Harrow I, Huala E, Krallinger M, Leser U, Li D, Liu F, Lu Z, Maltais LJ, Okazaki N, Perfetto L, Rinaldi F, Sætre R, Salgado D, Srinivasan P, Thomas PE, Toldo L, Hirschman L, Wu CH.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S4. doi: 10.1186/1471-2105-12-S8-S4.

PMID:
22151968
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

U-Compare bio-event meta-service: compatible BioNLP event extraction services.

Kano Y, Björne J, Ginter F, Salakoski T, Buyko E, Hahn U, Cohen KB, Verspoor K, Roeder C, Hunter LE, Kilicoglu H, Bergler S, Van Landeghem S, Van Parys T, Van de Peer Y, Miwa M, Ananiadou S, Neves M, Pascual-Montano A, Özgür A, Radev DR, Riedel S, Sætre R, Chun HW, Kim JD, Pyysalo S, Ohta T, Tsujii J.

BMC Bioinformatics. 2011 Dec 18;12:481. doi: 10.1186/1471-2105-12-481.

PMID:
22177292
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Terminological resources for text mining over biomedical scientific literature.

Rinaldi F, Kaljurand K, Sætre R.

Artif Intell Med. 2011 Jun;52(2):107-14. doi: 10.1016/j.artmed.2011.04.011. Epub 2011 Jun 11.

PMID:
21652190
[PubMed - indexed for MEDLINE]
4.

AGRA: analysis of gene ranking algorithms.

Kocbek S, Sætre R, Stiglic G, Kim JD, Pernek I, Tsuruoka Y, Kokol P, Ananiadou S, Tsujii J.

Bioinformatics. 2011 Apr 15;27(8):1185-6. doi: 10.1093/bioinformatics/btr097. Epub 2011 Feb 23.

PMID:
21349873
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Improving the inter-corpora compatibility for protein annotations.

Wang Y, Kim JD, Saetre R, Pyysalo S, Ohta T, Tsujii J.

J Bioinform Comput Biol. 2010 Oct;8(5):901-16.

PMID:
20981894
[PubMed - indexed for MEDLINE]
6.

Extracting protein interactions from text with the unified AkaneRE event extraction system.

Saetre R, Yoshida K, Miwa M, Matsuzaki T, Kano Y, Tsujii J.

IEEE/ACM Trans Comput Biol Bioinform. 2010 Jul-Sep;7(3):442-53. doi: 10.1109/TCBB.2010.46.

PMID:
20671316
[PubMed - indexed for MEDLINE]
7.

Event extraction with complex event classification using rich features.

Miwa M, Saetre R, Kim JD, Tsujii J.

J Bioinform Comput Biol. 2010 Feb;8(1):131-46.

PMID:
20183879
[PubMed - indexed for MEDLINE]
8.

Investigating heterogeneous protein annotations toward cross-corpora utilization.

Wang Y, Kim JD, Saetre R, Pyysalo S, Tsujii J.

BMC Bioinformatics. 2009 Dec 9;10:403. doi: 10.1186/1471-2105-10-403.

PMID:
19995463
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Protein-protein interaction extraction by leveraging multiple kernels and parsers.

Miwa M, Saetre R, Miyao Y, Tsujii J.

Int J Med Inform. 2009 Dec;78(12):e39-46. doi: 10.1016/j.ijmedinf.2009.04.010. Epub 2009 Jun 4.

PMID:
19501018
[PubMed - indexed for MEDLINE]
10.

Evaluating contributions of natural language parsers to protein-protein interaction extraction.

Miyao Y, Sagae K, Saetre R, Matsuzaki T, Tsujii J.

Bioinformatics. 2009 Feb 1;25(3):394-400. doi: 10.1093/bioinformatics/btn631. Epub 2008 Dec 9.

PMID:
19073593
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Introducing meta-services for biomedical information extraction.

Leitner F, Krallinger M, Rodriguez-Penagos C, Hakenberg J, Plake C, Kuo CJ, Hsu CN, Tsai RT, Hung HC, Lau WW, Johnson CA, Saetre R, Yoshida K, Chen YH, Kim S, Shin SY, Zhang BT, Baumgartner WA Jr, Hunter L, Haddow B, Matthews M, Wang X, Ruch P, Ehrler F, Ozgür A, Erkan G, Radev DR, Krauthammer M, Luong T, Hoffmann R, Sander C, Valencia A.

Genome Biol. 2008;9 Suppl 2:S6. doi: 10.1186/gb-2008-9-s2-s6. Epub 2008 Sep 1.

PMID:
18834497
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Filling the gaps between tools and users: a tool comparator, using protein-protein interaction as an example.

Kano Y, Nguyen N, Saetre R, Yoshida K, Miyao Y, Tsuruoka Y, Matsubayashi Y, Ananiadou S, Tsujii J.

Pac Symp Biocomput. 2008:616-27.

PMID:
18229720
[PubMed - indexed for MEDLINE]
Free Article
13.

Comments on quantitative analysis of polyethylene blends by Fourier transform infrared spectroscopy.

Saetre R.

Appl Spectrosc. 2004 Jun;58(6):754-5; author reply 755-6. No abstract available.

PMID:
15198831
[PubMed - indexed for MEDLINE]
14.

A rapid, sensitive technique to assay penicillamine levels in blood and urine.

Russell AS, Saetre R, Davis P, Rabenstein DL.

J Rheumatol. 1979 Jan-Feb;6(1):15-9.

PMID:
439105
[PubMed - indexed for MEDLINE]
15.

Determination of cysteine in plasma and urine and homocysteine in plasma by high-pressure liquid chromatography.

Saetre R, Rabenstein DL.

Anal Biochem. 1978 Oct 15;90(2):684-92. No abstract available.

PMID:
727503
[PubMed - indexed for MEDLINE]
16.

Determination of cysteine and glutathione in fruit by high-performance liquid chromatography.

Saetre R, Rabenstein DL.

J Agric Food Chem. 1978 Jul-Aug;26(4):982-3. No abstract available.

PMID:
670579
[PubMed - indexed for MEDLINE]
17.

Analysis for glutathione in blood by high-performance liquid chromatography.

Rabenstein DL, Saetre R.

Clin Chem. 1978 Jul;24(7):1140-3.

PMID:
657492
[PubMed - indexed for MEDLINE]
Free Article
18.

Determination of penicillamine in blood and urine by high performance liquid chromatography.

Saetre R, Rabenstein DL.

Anal Chem. 1978 Feb;50(2):278-80. No abstract available.

PMID:
623383
[PubMed - indexed for MEDLINE]
19.

Mercury-based electrochemical detector of liquid chromatography for the detection of glutathione and other sulfur-containing compounds.

Rabenstein DL, Saetre R.

Anal Chem. 1977 Jun;49(7):1036-9. No abstract available.

PMID:
860829
[PubMed - indexed for MEDLINE]
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