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Items: 16

1.

Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin.

Hoadley KA, Yau C, Wolf DM, Cherniack AD, Tamborero D, Ng S, Leiserson MD, Niu B, McLellan MD, Uzunangelov V, Zhang J, Kandoth C, Akbani R, Shen H, Omberg L, Chu A, Margolin AA, Van't Veer LJ, Lopez-Bigas N, Laird PW, Raphael BJ, Ding L, Robertson AG, Byers LA, Mills GB, Weinstein JN, Van Waes C, Chen Z, Collisson EA; Cancer Genome Atlas Research Network, Benz CC, Perou CM, Stuart JM.

Cell. 2014 Aug 14;158(4):929-44. doi: 10.1016/j.cell.2014.06.049. Epub 2014 Aug 7.

2.

Comprehensive molecular characterization of gastric adenocarcinoma.

Cancer Genome Atlas Research Network.

Nature. 2014 Sep 11;513(7517):202-9. doi: 10.1038/nature13480. Epub 2014 Jul 23.

3.

Comprehensive molecular characterization of urothelial bladder carcinoma.

Cancer Genome Atlas Research Network.

Nature. 2014 Mar 20;507(7492):315-22. doi: 10.1038/nature12965. Epub 2014 Jan 29.

4.

The somatic genomic landscape of glioblastoma.

Brennan CW, Verhaak RG, McKenna A, Campos B, Noushmehr H, Salama SR, Zheng S, Chakravarty D, Sanborn JZ, Berman SH, Beroukhim R, Bernard B, Wu CJ, Genovese G, Shmulevich I, Barnholtz-Sloan J, Zou L, Vegesna R, Shukla SA, Ciriello G, Yung WK, Zhang W, Sougnez C, Mikkelsen T, Aldape K, Bigner DD, Van Meir EG, Prados M, Sloan A, Black KL, Eschbacher J, Finocchiaro G, Friedman W, Andrews DW, Guha A, Iacocca M, O'Neill BP, Foltz G, Myers J, Weisenberger DJ, Penny R, Kucherlapati R, Perou CM, Hayes DN, Gibbs R, Marra M, Mills GB, Lander E, Spellman P, Wilson R, Sander C, Weinstein J, Meyerson M, Gabriel S, Laird PW, Haussler D, Getz G, Chin L; TCGA Research Network.

Cell. 2013 Oct 10;155(2):462-77. doi: 10.1016/j.cell.2013.09.034. Erratum in: Cell. 2014 Apr 24;157(3):753.

5.

The Cancer Genome Atlas Pan-Cancer analysis project.

Cancer Genome Atlas Research Network, Weinstein JN, Collisson EA, Mills GB, Shaw KR, Ozenberger BA, Ellrott K, Shmulevich I, Sander C, Stuart JM.

Nat Genet. 2013 Oct;45(10):1113-20. doi: 10.1038/ng.2764.

6.

Fastbreak: a tool for analysis and visualization of structural variations in genomic data.

Bressler R, Lin J, Eakin A, Robinson T, Kreisberg R, Rovira H, Knijnenburg T, Boyle J, Shmulevich I.

EURASIP J Bioinform Syst Biol. 2012 Oct 9;2012(1):15. doi: 10.1186/1687-4153-2012-15.

7.

Increasing coverage of transcription factor position weight matrices through domain-level homology.

Bernard B, Thorsson V, Rovira H, Shmulevich I.

PLoS One. 2012;7(8):e42779. doi: 10.1371/journal.pone.0042779. Epub 2012 Aug 27.

8.

EPEPT: a web service for enhanced P-value estimation in permutation tests.

Knijnenburg TA, Lin J, Rovira H, Boyle J, Shmulevich I.

BMC Bioinformatics. 2011 Oct 24;12:411. doi: 10.1186/1471-2105-12-411.

9.

SEQADAPT: an adaptable system for the tracking, storage and analysis of high throughput sequencing experiments.

Burdick DB, Cavnor CC, Handcock J, Killcoyne S, Lin J, Marzolf B, Ramsey SA, Rovira H, Bressler R, Shmulevich I, Boyle J.

BMC Bioinformatics. 2010 Jul 14;11:377. doi: 10.1186/1471-2105-11-377.

10.

Complicated bronchiolitis: another use for your bedside ultrasound in the emergency department.

Soto F, Soltero R, Rovira H.

Bol Asoc Med P R. 2009 Jul-Sep;101(3):51-3.

PMID:
20120987
11.

Adaptable data management for systems biology investigations.

Boyle J, Rovira H, Cavnor C, Burdick D, Killcoyne S, Shmulevich I.

BMC Bioinformatics. 2009 Mar 6;10:79. doi: 10.1186/1471-2105-10-79.

12.

[Cervicofacial SMAS and its relations with intrapetrous facial nerve].

Attali JP, Rovira H, Philip F, Traissac L.

Rev Laryngol Otol Rhinol (Bord). 1993;114(3):225-9. French. No abstract available.

PMID:
8191070
13.

[Evaluation of the efficacy of the combination amoxicillin-clavulanic acid-tobramycin for the prevention of infections after surgery for ORL cancers].

Philip V, Saux MC, Rovira H, Boutin F, Traissac L.

Ann Otolaryngol Chir Cervicofac. 1992;109(2):87-94. French.

PMID:
1524365
14.

[Our experience with percutaneous endoscopic gastrostomy in pharyngo-laryngeal surgery].

Bertrand B, De Monredon O, Rovira HP, Devars F, Traissac L.

Rev Laryngol Otol Rhinol (Bord). 1992;113(2):125-9. French.

PMID:
1344521
15.

[Electromyography of the larynx in the diagnosis of spontaneous or post-thyroidectomy laryngeal paralysis].

Traissac L, Gioux M, Rovira HP, Henry C, Bertrand B.

Rev Laryngol Otol Rhinol (Bord). 1991;112(3):205-7. French.

PMID:
1896692
16.

[Evaluation of voice quality. Experimental approach and modeling of the prosthetic voice of laryngectomized patients].

Rovira HP, Cazals Y, Traissac L.

Ann Otolaryngol Chir Cervicofac. 1991;108(7):417-23. Review. French.

PMID:
1789615
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