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Results: 1 to 20 of 253

1.

Taking structure searches to the next dimension.

Schafferhans A, Rost B.

Structure. 2014 Jul 8;22(7):938-9. doi: 10.1016/j.str.2014.06.007.

PMID:
25007224
[PubMed - in process]
2.

Structural basis for a pH-sensitive calcium leak across membranes.

Chang Y, Bruni R, Kloss B, Assur Z, Kloppmann E, Rost B, Hendrickson WA, Liu Q.

Science. 2014 Jun 6;344(6188):1131-5. doi: 10.1126/science.1252043.

PMID:
24904158
[PubMed - indexed for MEDLINE]
3.

HeatMapViewer: interactive display of 2D data in biology.

Yachdav G, Hecht M, Pasmanik-Chor M, Yeheskel A, Rost B.

F1000Res. 2014 Feb 13;3:48. doi: 10.12688/f1000research.3-48.v1. eCollection 2014.

PMID:
24860644
[PubMed]
Free PMC Article
4.

LocTree3 prediction of localization.

Goldberg T, Hecht M, Hamp T, Karl T, Yachdav G, Ahmed N, Altermann U, Angerer P, Ansorge S, Balasz K, Bernhofer M, Betz A, Cizmadija L, Do KT, Gerke J, Greil R, Joerdens V, Hastreiter M, Hembach K, Herzog M, Kalemanov M, Kluge M, Meier A, Nasir H, Neumaier U, Prade V, Reeb J, Sorokoumov A, Troshani I, Vorberg S, Waldraff S, Zierer J, Nielsen H, Rost B.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W350-5. doi: 10.1093/nar/gku396. Epub 2014 May 21.

PMID:
24848019
[PubMed - in process]
Free Article
5.

PredictProtein-an open resource for online prediction of protein structural and functional features.

Yachdav G, Kloppmann E, Kajan L, Hecht M, Goldberg T, Hamp T, Hönigschmid P, Schafferhans A, Roos M, Bernhofer M, Richter L, Ashkenazy H, Punta M, Schlessinger A, Bromberg Y, Schneider R, Vriend G, Sander C, Ben-Tal N, Rost B.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W337-43. doi: 10.1093/nar/gku366. Epub 2014 May 5.

PMID:
24799431
[PubMed - in process]
Free Article
6.

The impact of iron limitation on the physiology of the Antarctic diatom Chaetoceros simplex.

Petrou K, Trimborn S, Rost B, Ralph PJ, Hassler CS.

Mar Biol. 2014;161:925-937. Epub 2014 Jan 29.

PMID:
24719494
[PubMed]
Free PMC Article
7.

tagtog: interactive and text-mining-assisted annotation of gene mentions in PLOS full-text articles.

Cejuela JM, McQuilton P, Ponting L, Marygold SJ, Stefancsik R, Millburn GH, Rost B; FlyBase Consortium.

Database (Oxford). 2014 Apr 7;2014(0):bau033. doi: 10.1093/database/bau033. Print 2014.

PMID:
24715220
[PubMed - in process]
Free PMC Article
8.

FreeContact: fast and free software for protein contact prediction from residue co-evolution.

Kaján L, Hopf TA, Kalaš M, Marks DS, Rost B.

BMC Bioinformatics. 2014 Mar 26;15:85. doi: 10.1186/1471-2105-15-85.

PMID:
24669753
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Strong shift from HCO3 (-) to CO 2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects.

Kottmeier DM, Rokitta SD, Tortell PD, Rost B.

Photosynth Res. 2014 Sep;121(2-3):265-75. doi: 10.1007/s11120-014-9984-9. Epub 2014 Feb 23.

PMID:
24563097
[PubMed - in process]
10.

Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium.

Eichner M, Kranz SA, Rost B.

Physiol Plant. 2014 Feb 18. doi: 10.1111/ppl.12172. [Epub ahead of print]

PMID:
24547877
[PubMed - as supplied by publisher]
11.

Co-expression and co-localization of hub proteins and their partners are encoded in protein sequence.

Feiglin A, Ashkenazi S, Schlessinger A, Rost B, Ofran Y.

Mol Biosyst. 2014 Apr;10(4):787-94. doi: 10.1039/c3mb70411d. Epub 2014 Jan 23.

PMID:
24457447
[PubMed - in process]
12.

Evolutionary potential of marine phytoplankton under ocean acidification.

Collins S, Rost B, Rynearson TA.

Evol Appl. 2014 Jan;7(1):140-55. doi: 10.1111/eva.12120. Epub 2013 Nov 25.

PMID:
24454553
[PubMed]
Free PMC Article
13.

ISCB: past-present perspective for the International Society for Computational Biology.

Rost B.

Bioinformatics. 2014 Jan 1;30(1):143-5. doi: 10.1093/bioinformatics/btt669.

PMID:
24352412
[PubMed - indexed for MEDLINE]
14.

Differential effects of ocean acidification on carbon acquisition in two bloom-forming dinoflagellate species.

Eberlein T, Van de Waal DB, Rost B.

Physiol Plant. 2013 Dec 9. doi: 10.1111/ppl.12137. [Epub ahead of print]

PMID:
24320746
[PubMed - as supplied by publisher]
15.

Ultrafast endocytosis at mouse hippocampal synapses.

Watanabe S, Rost BR, Camacho-Pérez M, Davis MW, Söhl-Kielczynski B, Rosenmund C, Jorgensen EM.

Nature. 2013 Dec 12;504(7479):242-7. doi: 10.1038/nature12809. Epub 2013 Dec 4.

PMID:
24305055
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Impact of elevated pCO₂ on paralytic shellfish poisoning toxin content and composition in Alexandrium tamarense.

Van de Waal DB, Eberlein T, John U, Wohlrab S, Rost B.

Toxicon. 2014 Feb;78:58-67. doi: 10.1016/j.toxicon.2013.11.011. Epub 2013 Dec 1.

PMID:
24291633
[PubMed - in process]
17.

Iron limitation modulates ocean acidification effects on southern ocean phytoplankton communities.

Hoppe CJ, Hassler CS, Payne CD, Tortell PD, Rost B, Trimborn S.

PLoS One. 2013 Nov 20;8(11):e79890. doi: 10.1371/journal.pone.0079890. eCollection 2013.

PMID:
24278207
[PubMed - in process]
Free PMC Article
18.

ISCB: past-present perspective for the International Society for Computational Biology.

Rost B.

Bioinformatics. 2013 Dec 15;29(24):3243-5. doi: 10.1093/bioinformatics/btt629. Epub 2013 Nov 14.

PMID:
24234004
[PubMed - indexed for MEDLINE]
19.

An estimated 5% of new protein structures solved today represent a new Pfam family.

Mistry J, Kloppmann E, Rost B, Punta M.

Acta Crystallogr D Biol Crystallogr. 2013 Nov;69(Pt 11):2186-93. doi: 10.1107/S0907444913027157. Epub 2013 Oct 12.

PMID:
24189229
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

ISCB computational biology Wikipedia competition.

Bateman A, Kelso J, Mietchen D, Macintyre G, Di Domenico T, Abeel T, Logan DW, Radivojac P, Rost B.

PLoS Comput Biol. 2013;9(9):e1003242. doi: 10.1371/journal.pcbi.1003242. Epub 2013 Sep 19. No abstract available.

PMID:
24068913
[PubMed - indexed for MEDLINE]
Free PMC Article

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