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Results: 13

1.

Targeted journal curation as a method to improve data currency at the Comparative Toxicogenomics Database.

Davis AP, Johnson RJ, Lennon-Hopkins K, Sciaky D, Rosenstein MC, Wiegers TC, Mattingly CJ.

Database (Oxford). 2012 Dec 6;2012:bas051. doi: 10.1093/database/bas051. Print 2012.

PMID:
23221299
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Ranking transitive chemical-disease inferences using local network topology in the comparative toxicogenomics database.

King BL, Davis AP, Rosenstein MC, Wiegers TC, Mattingly CJ.

PLoS One. 2012;7(11):e46524. doi: 10.1371/journal.pone.0046524. Epub 2012 Nov 7.

PMID:
23144783
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The Comparative Toxicogenomics Database: update 2013.

Davis AP, Murphy CG, Johnson R, Lay JM, Lennon-Hopkins K, Saraceni-Richards C, Sciaky D, King BL, Rosenstein MC, Wiegers TC, Mattingly CJ.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1104-14. doi: 10.1093/nar/gks994. Epub 2012 Oct 23.

PMID:
23093600
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database.

Davis AP, Wiegers TC, Rosenstein MC, Mattingly CJ.

Database (Oxford). 2012 Mar 20;2012:bar065. doi: 10.1093/database/bar065. Print 2012.

PMID:
22434833
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

DiseaseComps: a metric that discovers similar diseases based upon common toxicogenomic profiles at CTD.

Davis AP, Rosenstein MC, Wiegers TC, Mattingly CJ.

Bioinformation. 2011;7(4):154-6. Epub 2011 Oct 14.

PMID:
22125387
[PubMed]
Free PMC Article
6.

The curation paradigm and application tool used for manual curation of the scientific literature at the Comparative Toxicogenomics Database.

Davis AP, Wiegers TC, Rosenstein MC, Murphy CG, Mattingly CJ.

Database (Oxford). 2011 Sep 20;2011:bar034. doi: 10.1093/database/bar034. Print 2011. Erratum in: Database (Oxford). 2012;2012:bas012. Rosenstein, Michael C [added].

PMID:
21933848
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genetic and environmental pathways to complex diseases.

Gohlke JM, Thomas R, Zhang Y, Rosenstein MC, Davis AP, Murphy C, Becker KG, Mattingly CJ, Portier CJ.

BMC Syst Biol. 2009 May 5;3:46. doi: 10.1186/1752-0509-3-46.

PMID:
19416532
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

GeneComps and ChemComps: a new CTD metric to identify genes and chemicals with shared toxicogenomic profiles.

Davis AP, Murphy CG, Saraceni-Richards CA, Rosenstein MC, Wiegers TC, Hampton TH, Mattingly CJ.

Bioinformation. 2009 Oct 15;4(4):173-4.

PMID:
20198196
[PubMed]
Free PMC Article
9.

The Comparative Toxicogenomics Database facilitates identification and understanding of chemical-gene-disease associations: arsenic as a case study.

Davis AP, Murphy CG, Rosenstein MC, Wiegers TC, Mattingly CJ.

BMC Med Genomics. 2008 Oct 9;1:48. doi: 10.1186/1755-8794-1-48.

PMID:
18845002
[PubMed]
Free PMC Article
10.

Comparative Toxicogenomics Database: a knowledgebase and discovery tool for chemical-gene-disease networks.

Davis AP, Murphy CG, Saraceni-Richards CA, Rosenstein MC, Wiegers TC, Mattingly CJ.

Nucleic Acids Res. 2009 Jan;37(Database issue):D786-92. doi: 10.1093/nar/gkn580. Epub 2008 Sep 9.

PMID:
18782832
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

The Comparative Toxicogenomics Database (CTD): a resource for comparative toxicological studies.

Mattingly CJ, Rosenstein MC, Colby GT, Forrest JN Jr, Boyer JL.

J Exp Zool A Comp Exp Biol. 2006 Sep 1;305(9):689-92. Review.

PMID:
16902965
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The comparative toxicogenomics database: a cross-species resource for building chemical-gene interaction networks.

Mattingly CJ, Rosenstein MC, Davis AP, Colby GT, Forrest JN Jr, Boyer JL.

Toxicol Sci. 2006 Aug;92(2):587-95. Epub 2006 May 4.

PMID:
16675512
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Promoting comparative molecular studies in environmental health research: an overview of the comparative toxicogenomics database (CTD).

Mattingly CJ, Colby GT, Rosenstein MC, Forrest JN Jr, Boyer JL.

Pharmacogenomics J. 2004;4(1):5-8. Review. No abstract available.

PMID:
14735110
[PubMed - indexed for MEDLINE]

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