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Results: 1 to 20 of 23

1.

OntoGene web services for biomedical text mining.

Rinaldi F, Clematide S, Marques H, Ellendorff T, Romacker M, Rodriguez-Esteban R.

BMC Bioinformatics. 2014;15 Suppl 14:S6. doi: 10.1186/1471-2105-15-S14-S6. Epub 2014 Nov 27.

2.

Evolving BioAssay Ontology (BAO): modularization, integration and applications.

Abeyruwan S, Vempati UD, Küçük-McGinty H, Visser U, Koleti A, Mir A, Sakurai K, Chung C, Bittker JA, Clemons PA, Brudz S, Siripala A, Morales AJ, Romacker M, Twomey D, Bureeva S, Lemmon V, Schürer SC.

J Biomed Semantics. 2014 Jun 3;5(Suppl 1 Proceedings of the Bio-Ontologies Spec Interest G):S5. doi: 10.1186/2041-1480-5-S1-S5. eCollection 2014.

3.

Using the OntoGene pipeline for the triage task of BioCreative 2012.

Rinaldi F, Clematide S, Hafner S, Schneider G, Grigonyte G, Romacker M, Vachon T.

Database (Oxford). 2013 Feb 9;2013:bas053. doi: 10.1093/database/bas053. Print 2013.

4.

The gene normalization task in BioCreative III.

Lu Z, Kao HY, Wei CH, Huang M, Liu J, Kuo CJ, Hsu CN, Tsai RT, Dai HJ, Okazaki N, Cho HC, Gerner M, Solt I, Agarwal S, Liu F, Vishnyakova D, Ruch P, Romacker M, Rinaldi F, Bhattacharya S, Srinivasan P, Liu H, Torii M, Matos S, Campos D, Verspoor K, Livingston KM, Wilbur WJ.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S2. doi: 10.1186/1471-2105-12-S8-S2.

5.

OntoGene in BioCreative II.5.

Rinaldi F, Schneider G, Kaljurand K, Clematide S, Vachon T, Romacker M.

IEEE/ACM Trans Comput Biol Bioinform. 2010 Jul-Sep;7(3):472-80. doi: 10.1109/TCBB.2010.50.

PMID:
20671319
6.

OntoGene in BioCreative II.

Rinaldi F, Kappeler T, Kaljurand K, Schneider G, Klenner M, Clematide S, Hess M, von Allmen JM, Parisot P, Romacker M, Vachon T.

Genome Biol. 2008;9 Suppl 2:S13. doi: 10.1186/gb-2008-9-s2-s13. Epub 2008 Sep 1.

7.

An environment for relation mining over richly annotated corpora: the case of GENIA.

Rinaldi F, Schneider G, Kaljurand K, Hess M, Romacker M.

BMC Bioinformatics. 2006 Nov 24;7 Suppl 3:S3.

8.

MEDSYNDIKATE--a natural language system for the extraction of medical information from findings reports.

Hahn U, Romacker M, Schulz S.

Int J Med Inform. 2002 Dec 4;67(1-3):63-74.

PMID:
12460632
9.
10.
11.

Knowledge engineering the UMLS.

Schulz S, Romacker M, Hahn U.

Stud Health Technol Inform. 2000;77:701-5.

PMID:
11187644
12.

Semantic analysis of medical free texts.

Romacker M, Hahn U, Schulz S, Klar R.

Stud Health Technol Inform. 2000;77:438-42.

PMID:
11187590
13.

Modeling anatomical spatial relations with description logics.

Schulz S, Hahn U, Romacker M.

Proc AMIA Symp. 2000:779-83.

14.
15.

Towards a multilingual morpheme thesaurus for medical free-text retrieval.

Schulz S, Romacker M, Franz P, Zaiss A, Klar R, Hahn U.

Stud Health Technol Inform. 1999;68:891-4.

PMID:
10725027
16.

Streamlining semantic interpretation for medical narratives.

Romacker M, Schulz S, Hahn U.

Proc AMIA Symp. 1999:925-9.

17.

Why discourse structures in medical reports matter for the validity of automatically generated text knowledge bases.

Hahn U, Romacker M, Schulz S.

Stud Health Technol Inform. 1998;52 Pt 1:633-8.

PMID:
10384532
19.

How knowledge drives understanding--matching medical ontologies with the needs of medical language processing.

Hahn U, Romacker M, Schulz S.

Artif Intell Med. 1999 Jan;15(1):25-51. Review.

PMID:
9930615
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