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Items: 1 to 20 of 192


Retention of duplicated ITAM-containing transmembrane signaling subunits in the tetraploid amphibian species Xenopus laevis.

Guselnikov SV, Grayfer L, De Jesús Andino F, Rogozin IB, Robert J, Taranin AV.

Dev Comp Immunol. 2015 Nov;53(1):158-68. doi: 10.1016/j.dci.2015.07.002. Epub 2015 Jul 11.


Transposable Element Insertions in Long Intergenic Non-Coding RNA Genes.

Kannan S, Chernikova D, Rogozin IB, Poliakov E, Managadze D, Koonin EV, Milanesi L.

Front Bioeng Biotechnol. 2015 Jun 9;3:71. doi: 10.3389/fbioe.2015.00071. eCollection 2015.


Disruption of Transcriptional Coactivator Sub1 Leads to Genome-Wide Re-distribution of Clustered Mutations Induced by APOBEC in Active Yeast Genes.

Lada AG, Kliver SF, Dhar A, Polev DE, Masharsky AE, Rogozin IB, Pavlov YI.

PLoS Genet. 2015 May 5;11(5):e1005217. doi: 10.1371/journal.pgen.1005217. eCollection 2015 May.


Genetics in genomic era.

Poliakov E, Cooper DN, Stepchenkova EI, Rogozin IB.

Genet Res Int. 2015;2015:364960. doi: 10.1155/2015/364960. Epub 2015 Mar 25. No abstract available.


Emergence and subsequent functional specialization of kindlins during evolution of cell adhesiveness.

Meller J, Rogozin IB, Poliakov E, Meller N, Bedanov-Pack M, Plow EF, Qin J, Podrez EA, Byzova TV.

Mol Biol Cell. 2015 Feb 15;26(4):786-96. doi: 10.1091/mbc.E14-08-1294. Epub 2014 Dec 24.


MitoCOGs: clusters of orthologous genes from mitochondria and implications for the evolution of eukaryotes.

Kannan S, Rogozin IB, Koonin EV.

BMC Evol Biol. 2014 Nov 25;14:237. doi: 10.1186/s12862-014-0237-5.


Comparative mutational analyses of influenza A viruses.

Cheung PP, Rogozin IB, Choy KT, Ng HY, Peiris JS, Yen HL.

RNA. 2015 Jan;21(1):36-47. doi: 10.1261/rna.045369.114. Epub 2014 Nov 17.


Generalized portrait of cancer metabolic pathways inferred from a list of genes overexpressed in cancer.

Poliakov E, Managadze D, Rogozin IB.

Genet Res Int. 2014;2014:646193. doi: 10.1155/2014/646193. Epub 2014 Aug 27.


Complexity of gene expression evolution after duplication: protein dosage rebalancing.

Rogozin IB.

Genet Res Int. 2014;2014:516508. doi: 10.1155/2014/516508. Epub 2014 Aug 17. Review.


Impairment of translation in neurons as a putative causative factor for autism.

Poliakov E, Koonin EV, Rogozin IB.

Biol Direct. 2014 Jul 10;9:16. doi: 10.1186/1745-6150-9-16.


Gene family level comparative analysis of gene expression in mammals validates the ortholog conjecture.

Rogozin IB, Managadze D, Shabalina SA, Koonin EV.

Genome Biol Evol. 2014 Apr;6(4):754-62. doi: 10.1093/gbe/evu051.


Genetic characterization of feline calicivirus strains associated with varying disease manifestations during an outbreak season in Missouri (1995-1996).

Prikhodko VG, Sandoval-Jaime C, Abente EJ, Bok K, Parra GI, Rogozin IB, Ostlund EN, Green KY, Sosnovtsev SV.

Virus Genes. 2014 Feb;48(1):96-110. doi: 10.1007/s11262-013-1005-0. Epub 2013 Nov 12.


Genome-wide mutation avalanches induced in diploid yeast cells by a base analog or an APOBEC deaminase.

Lada AG, Stepchenkova EI, Waisertreiger IS, Noskov VN, Dhar A, Eudy JD, Boissy RJ, Hirano M, Rogozin IB, Pavlov YI.

PLoS Genet. 2013;9(9):e1003736. doi: 10.1371/journal.pgen.1003736. Epub 2013 Sep 5.


The vast, conserved mammalian lincRNome.

Managadze D, Lobkovsky AE, Wolf YI, Shabalina SA, Rogozin IB, Koonin EV.

PLoS Comput Biol. 2013;9(2):e1002917. doi: 10.1371/journal.pcbi.1002917. Epub 2013 Feb 28.


AID/APOBEC cytosine deaminase induces genome-wide kataegis.

Lada AG, Dhar A, Boissy RJ, Hirano M, Rubel AA, Rogozin IB, Pavlov YI.

Biol Direct. 2012 Dec 18;7:47; discussion 47. doi: 10.1186/1745-6150-7-47.


Origin and evolution of retinoid isomerization machinery in vertebrate visual cycle: hint from jawless vertebrates.

Poliakov E, Gubin AN, Stearn O, Li Y, Campos MM, Gentleman S, Rogozin IB, Redmond TM.

PLoS One. 2012;7(11):e49975. doi: 10.1371/journal.pone.0049975. Epub 2012 Nov 27.


Whence genes in pieces: reconstruction of the exon-intron gene structures of the last eukaryotic common ancestor and other ancestral eukaryotes.

Koonin EV, Csuros M, Rogozin IB.

Wiley Interdiscip Rev RNA. 2013 Jan-Feb;4(1):93-105. doi: 10.1002/wrna.1143. Epub 2012 Nov 8. Review.


Modulation of mutagenesis in eukaryotes by DNA replication fork dynamics and quality of nucleotide pools.

Waisertreiger IS, Liston VG, Menezes MR, Kim HM, Lobachev KS, Stepchenkova EI, Tahirov TH, Rogozin IB, Pavlov YI.

Environ Mol Mutagen. 2012 Dec;53(9):699-724. doi: 10.1002/em.21735. Epub 2012 Oct 10. Review.


Computational prediction of polycomb-associated long non-coding RNAs.

Glazko GV, Zybailov BL, Rogozin IB.

PLoS One. 2012;7(9):e44878. doi: 10.1371/journal.pone.0044878. Epub 2012 Sep 13.


Oncogenic potential is related to activating effect of cancer single and double somatic mutations in receptor tyrosine kinases.

Hashimoto K, Rogozin IB, Panchenko AR.

Hum Mutat. 2012 Nov;33(11):1566-75. doi: 10.1002/humu.22145. Epub 2012 Jul 16.

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