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Results: 1 to 20 of 23

1.

A pangenomic analysis of the Nannochloropsis organellar genomes reveals novel genetic variations in key metabolic genes.

Starkenburg SR, Kwon KJ, Jha RK, McKay C, Jacobs M, Chertkov O, Twary S, Rocap G, Cattolico RA.

BMC Genomics. 2014 Mar 19;15:212. doi: 10.1186/1471-2164-15-212.

PMID:
24646409
[PubMed - in process]
Free PMC Article
2.

Effects of phosphorus starvation versus limitation on the marine cyanobacterium Prochlorococcus MED4 II: gene expression.

Reistetter EN, Krumhardt K, Callnan K, Roache-Johnson K, Saunders JK, Moore LR, Rocap G.

Environ Microbiol. 2013 Jul;15(7):2129-43. doi: 10.1111/1462-2920.12129. Epub 2013 May 6.

PMID:
23647921
[PubMed - indexed for MEDLINE]
3.

Biogeography of the uncultured marine picoeukaryote MAST-4: temperature-driven distribution patterns.

Rodríguez-Martínez R, Rocap G, Salazar G, Massana R.

ISME J. 2013 Aug;7(8):1531-43. doi: 10.1038/ismej.2013.53. Epub 2013 Apr 18.

PMID:
23598792
[PubMed - indexed for MEDLINE]
4.

Effects of phosphorus starvation versus limitation on the marine cyanobacterium Prochlorococcus MED4 I: uptake physiology.

Krumhardt KM, Callnan K, Roache-Johnson K, Swett T, Robinson D, Reistetter EN, Saunders JK, Rocap G, Moore LR.

Environ Microbiol. 2013 Jul;15(7):2114-28. doi: 10.1111/1462-2920.12079. Epub 2013 Feb 6.

PMID:
23387819
[PubMed - indexed for MEDLINE]
5.

Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs.

Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, Maruyama S, Arias MC, Ball SG, Gile GH, Hirakawa Y, Hopkins JF, Kuo A, Rensing SA, Schmutz J, Symeonidi A, Elias M, Eveleigh RJ, Herman EK, Klute MJ, Nakayama T, Oborník M, Reyes-Prieto A, Armbrust EV, Aves SJ, Beiko RG, Coutinho P, Dacks JB, Durnford DG, Fast NM, Green BR, Grisdale CJ, Hempel F, Henrissat B, Höppner MP, Ishida K, Kim E, Kořený L, Kroth PG, Liu Y, Malik SB, Maier UG, McRose D, Mock T, Neilson JA, Onodera NT, Poole AM, Pritham EJ, Richards TA, Rocap G, Roy SW, Sarai C, Schaack S, Shirato S, Slamovits CH, Spencer DF, Suzuki S, Worden AZ, Zauner S, Barry K, Bell C, Bharti AK, Crow JA, Grimwood J, Kramer R, Lindquist E, Lucas S, Salamov A, McFadden GI, Lane CE, Keeling PJ, Gray MW, Grigoriev IV, Archibald JM.

Nature. 2012 Dec 6;492(7427):59-65. doi: 10.1038/nature11681. Epub 2012 Nov 28.

PMID:
23201678
[PubMed - indexed for MEDLINE]
6.
7.

Low evolutionary diversification in a widespread and abundant uncultured protist (MAST-4).

Rodríguez-Martínez R, Rocap G, Logares R, Romac S, Massana R.

Mol Biol Evol. 2012 May;29(5):1393-406. doi: 10.1093/molbev/msr303. Epub 2011 Dec 13.

PMID:
22319144
[PubMed - indexed for MEDLINE]
Free Article
8.

Persistence of bacterial and archaeal communities in sea ice through an Arctic winter.

Collins RE, Rocap G, Deming JW.

Environ Microbiol. 2010 Jul;12(7):1828-41. doi: 10.1111/j.1462-2920.2010.02179.x. Epub 2010 Feb 25.

PMID:
20192970
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction.

Morris RM, Nunn BL, Frazar C, Goodlett DR, Ting YS, Rocap G.

ISME J. 2010 May;4(5):673-85. doi: 10.1038/ismej.2010.4. Epub 2010 Feb 18.

PMID:
20164862
[PubMed - indexed for MEDLINE]
10.

INTER- AND INTRASPECIFIC COMMUNITY STRUCTURE WITHIN THE DIATOM GENUS PSEUDO-NITZSCHIA (BACILLARIOPHYCEAE).

Hubbard KA, Rocap G, Armbrust EV.

J Phycol. 2008 Jun;44(3). doi: 10.1111/j.1529-8817.2008.00518.x.

PMID:
24376283
[PubMed]
Free PMC Article
11.

Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES293 (West Pacific) strains.

Cattolico RA, Jacobs MA, Zhou Y, Chang J, Duplessis M, Lybrand T, McKay J, Ong HC, Sims E, Rocap G.

BMC Genomics. 2008 May 8;9:211. doi: 10.1186/1471-2164-9-211.

PMID:
18462506
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

REPK: an analytical web server to select restriction endonucleases for terminal restriction fragment length polymorphism analysis.

Collins RE, Rocap G.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W58-62.

PMID:
17631616
[PubMed - indexed for MEDLINE]
Free PMC Article
13.
14.

Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies.

Ahlgren NA, Rocap G.

Appl Environ Microbiol. 2006 Nov;72(11):7193-204. Epub 2006 Aug 25.

PMID:
16936060
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Sulfolipids dramatically decrease phosphorus demand by picocyanobacteria in oligotrophic marine environments.

Van Mooy BA, Rocap G, Fredricks HF, Evans CT, Devol AH.

Proc Natl Acad Sci U S A. 2006 Jun 6;103(23):8607-12. Epub 2006 May 26.

PMID:
16731626
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Measurement of Prochlorococcus ecotypes using real-time polymerase chain reaction reveals different abundances of genotypes with similar light physiologies.

Ahlgren NA, Rocap G, Chisholm SW.

Environ Microbiol. 2006 Mar;8(3):441-54.

PMID:
16478451
[PubMed - indexed for MEDLINE]
17.

The photosynthetic apparatus of Prochlorococcus: Insights through comparative genomics.

Hess WR, Rocap G, Ting CS, Larimer F, Stilwagen S, Lamerdin J, Chisholm SW.

Photosynth Res. 2001;70(1):53-71.

PMID:
16228362
[PubMed - as supplied by publisher]
18.

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation.

Rocap G, Larimer FW, Lamerdin J, Malfatti S, Chain P, Ahlgren NA, Arellano A, Coleman M, Hauser L, Hess WR, Johnson ZI, Land M, Lindell D, Post AF, Regala W, Shah M, Shaw SL, Steglich C, Sullivan MB, Ting CS, Tolonen A, Webb EA, Zinser ER, Chisholm SW.

Nature. 2003 Aug 28;424(6952):1042-7. Epub 2003 Aug 13.

PMID:
12917642
[PubMed - indexed for MEDLINE]
Free Article
19.

Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences.

Rocap G, Distel DL, Waterbury JB, Chisholm SW.

Appl Environ Microbiol. 2002 Mar;68(3):1180-91.

PMID:
11872466
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Cyanobacterial photosynthesis in the oceans: the origins and significance of divergent light-harvesting strategies.

Ting CS, Rocap G, King J, Chisholm SW.

Trends Microbiol. 2002 Mar;10(3):134-42. Review.

PMID:
11864823
[PubMed - indexed for MEDLINE]

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