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Items: 1 to 20 of 52

1.

Evolutionary patterns of Toll-like receptor signaling pathway genes in the Suidae.

Darfour-Oduro KA, Megens HJ, Roca AL, Groenen MA, Schook LB.

BMC Evol Biol. 2016 Feb 9;16(1):33. doi: 10.1186/s12862-016-0602-7.

PMID:
26860534
2.

Episodic Diversifying Selection Shaped the Genomes of Gibbon Ape Leukemia Virus and Related Gammaretroviruses.

Alfano N, Kolokotronis SO, Tsangaras K, Roca AL, Xu W, Eiden MV, Greenwood AD.

J Virol. 2015 Dec 4;90(4):1757-72. doi: 10.1128/JVI.02745-15.

PMID:
26637454
3.

Endogenous murine leukemia retroviral variation across wild European and inbred strains of house mouse.

Hartmann S, Hasenkamp N, Mayer J, Michaux J, Morand S, Mazzoni CJ, Roca AL, Greenwood AD.

BMC Genomics. 2015 Aug 18;16:613. doi: 10.1186/s12864-015-1766-z.

4.

Evolutionary Analyses and Natural Selection of Betaine-Homocysteine S-Methyltransferase (BHMT) and BHMT2 Genes.

Ganu RS, Ishida Y, Koutmos M, Kolokotronis SO, Roca AL, Garrow TA, Schook LB.

PLoS One. 2015 Jul 27;10(7):e0134084. doi: 10.1371/journal.pone.0134084. eCollection 2015.

5.

Evolution: The Island of Misfit Mammoths.

Roca AL.

Curr Biol. 2015 Jun 29;25(13):R549-51. doi: 10.1016/j.cub.2015.05.006.

PMID:
26126277
6.

Variation in koala microbiomes within and between individuals: effect of body region and captivity status.

Alfano N, Courtiol A, Vielgrader H, Timms P, Roca AL, Greenwood AD.

Sci Rep. 2015 May 11;5:10189. doi: 10.1038/srep10189.

7.

Adaptive Evolution of Toll-Like Receptors (TLRs) in the Family Suidae.

Darfour-Oduro KA, Megens HJ, Roca AL, Groenen MA, Schook LB.

PLoS One. 2015 Apr 20;10(4):e0124069. doi: 10.1371/journal.pone.0124069. eCollection 2015.

8.

SmileFinder: a resampling-based approach to evaluate signatures of selection from genome-wide sets of matching allele frequency data in two or more diploid populations.

Guiblet WM, Zhao K, O'Brien SJ, Massey SE, Roca AL, Oleksyk TK.

Gigascience. 2015 Jan 14;4:1. doi: 10.1186/2047-217X-4-1. eCollection 2015.

9.

Elephant natural history: a genomic perspective.

Roca AL, Ishida Y, Brandt AL, Benjamin NR, Zhao K, Georgiadis NJ.

Annu Rev Anim Biosci. 2015;3:139-67. doi: 10.1146/annurev-animal-022114-110838. Epub 2014 Dec 8. Review.

PMID:
25493538
10.

Sequence variation of koala retrovirus transmembrane protein p15E among koalas from different geographic regions.

Ishida Y, McCallister C, Nikolaidis N, Tsangaras K, Helgen KM, Greenwood AD, Roca AL.

Virology. 2015 Jan 15;475:28-36. doi: 10.1016/j.virol.2014.10.036. Epub 2014 Nov 22.

11.

Proliferation of endogenous retroviruses in the early stages of a host germ line invasion.

Ishida Y, Zhao K, Greenwood AD, Roca AL.

Mol Biol Evol. 2015 Jan;32(1):109-20. doi: 10.1093/molbev/msu275. Epub 2014 Sep 25.

12.
13.

Hybridization capture reveals evolution and conservation across the entire Koala retrovirus genome.

Tsangaras K, Siracusa MC, Nikolaidis N, Ishida Y, Cui P, Vielgrader H, Helgen KM, Roca AL, Greenwood AD.

PLoS One. 2014 Apr 21;9(4):e95633. doi: 10.1371/journal.pone.0095633. eCollection 2014.

14.

Reconstruction of the narrow ridge using combined ridge split and guided bone regeneration with rhPDGF-BB growth factor-enhanced allograft.

Chiang T, Roca AL, Rostkowski S, Drew HJ, Simon B.

Int J Periodontics Restorative Dent. 2014 Jan-Feb;34(1):123-30. doi: 10.11607/prd.1633.

PMID:
24396847
15.

The elephants of Gash-Barka, Eritrea: nuclear and mitochondrial genetic patterns.

Brandt AL, Hagos Y, Yacob Y, David VA, Georgiadis NJ, Shoshani J, Roca AL.

J Hered. 2014 Jan-Feb;105(1):82-90. doi: 10.1093/jhered/est078. Epub 2013 Nov 27.

16.

Impact of population expansion on genetic diversity and structure of river otters (Lontra canadensis) in Central North America.

Brandt JR, Brandt AL, Ammer FK, Roca AL, Serfass TL.

J Hered. 2014 Jan-Feb;105(1):39-47. doi: 10.1093/jhered/est069. Epub 2013 Oct 23.

17.

Triangulating the provenance of African elephants using mitochondrial DNA.

Ishida Y, Georgiadis NJ, Hondo T, Roca AL.

Evol Appl. 2013 Feb;6(2):253-65. doi: 10.1111/j.1752-4571.2012.00286.x. Epub 2012 Aug 1.

18.

Evidence for selection at HIV host susceptibility genes in a West Central African human population.

Zhao K, Ishida Y, Oleksyk TK, Winkler CA, Roca AL.

BMC Evol Biol. 2012 Dec 6;12:237. doi: 10.1186/1471-2148-12-237.

19.

Historically low mitochondrial DNA diversity in koalas (Phascolarctos cinereus).

Tsangaras K, Ávila-Arcos MC, Ishida Y, Helgen KM, Roca AL, Greenwood AD.

BMC Genet. 2012 Oct 24;13:92. doi: 10.1186/1471-2156-13-92.

20.

One hundred twenty years of koala retrovirus evolution determined from museum skins.

Ávila-Arcos MC, Ho SY, Ishida Y, Nikolaidis N, Tsangaras K, Hönig K, Medina R, Rasmussen M, Fordyce SL, Calvignac-Spencer S, Willerslev E, Gilbert MT, Helgen KM, Roca AL, Greenwood AD.

Mol Biol Evol. 2013 Feb;30(2):299-304. doi: 10.1093/molbev/mss223. Epub 2012 Sep 14. Erratum in: Mol Biol Evol. 2013 May;30(5):1237.

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