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Results: 1 to 20 of 158

1.

Locus heterogeneity disease genes encode proteins with high interconnectivity in the human protein interaction network.

Keith BP, Robertson DL, Hentges KE.

Front Genet. 2014 Dec 9;5:434. doi: 10.3389/fgene.2014.00434. eCollection 2014.

PMID:
25538735
[PubMed]
Free PMC Article
2.

Molecular evolution of nitrogen assimilatory enzymes in marine prasinophytes.

Ghoshroy S, Robertson DL.

J Mol Evol. 2015 Jan;80(1):65-80. doi: 10.1007/s00239-014-9659-3. Epub 2014 Dec 11.

PMID:
25504421
[PubMed - in process]
3.

A logical model of HIV-1 interactions with the T-cell activation signalling pathway.

Oyeyemi OJ, Davies O, Robertson DL, Schwartz J.

Bioinformatics. 2014 Nov 26. pii: btu787. [Epub ahead of print]

PMID:
25431332
[PubMed - as supplied by publisher]
4.

Extracting patterns of database and software usage from the bioinformatics literature.

Duck G, Nenadic G, Brass A, Robertson DL, Stevens R.

Bioinformatics. 2014 Sep 1;30(17):i601-8. doi: 10.1093/bioinformatics/btu471.

PMID:
25161253
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The pain interactome: Connecting pain-specific protein interactions.

Jamieson DG, Moss A, Kennedy M, Jones S, Nenadic G, Robertson DL, Sidders B.

Pain. 2014 Nov;155(11):2243-52. doi: 10.1016/j.pain.2014.06.020. Epub 2014 Jun 28.

PMID:
24978826
[PubMed - in process]
Free PMC Article
6.

The utility of different bioinformatics algorithms for genotypic HIV-1 tropism testing in a large clinical cohort with multiple subtypes.

Bartlett AD, MaCartney MJ, Conibear TC, Feyertag F, Smith CJ, Johnson MA, Hyams C, Garcia-Diaz A, McCormick AL, Booth C, Robertson DL, Webster DP.

AIDS. 2014 Jul 17;28(11):1611-7. doi: 10.1097/QAD.0000000000000288.

PMID:
24785955
[PubMed - in process]
7.

Constraints from protein structure and intra-molecular coevolution influence the fitness of HIV-1 recombinants.

Woo J, Robertson DL, Lovell SC.

Virology. 2014 Apr;454-455:34-9. doi: 10.1016/j.virol.2014.01.029. Epub 2014 Feb 22.

PMID:
24725929
[PubMed - indexed for MEDLINE]
8.

Factors associated with siman immunodeficiency virus transmission in a natural African nonhuman primate host in the wild.

Ma D, Jasinska AJ, Feyertag F, Wijewardana V, Kristoff J, He T, Raehtz K, Schmitt CA, Jung Y, Cramer JD, Dione M, Antonio M, Tracy R, Turner T, Robertson DL, Pandrea I, Freimer N, Apetrei C; International Vervet Research Consortium.

J Virol. 2014 May;88(10):5687-705. doi: 10.1128/JVI.03606-13. Epub 2014 Mar 12.

PMID:
24623416
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Sensitive deep-sequencing-based HIV-1 genotyping assay to simultaneously determine susceptibility to protease, reverse transcriptase, integrase, and maturation inhibitors, as well as HIV-1 coreceptor tropism.

Gibson RM, Meyer AM, Winner D, Archer J, Feyertag F, Ruiz-Mateos E, Leal M, Robertson DL, Schmotzer CL, Quiñones-Mateu ME.

Antimicrob Agents Chemother. 2014;58(4):2167-85. doi: 10.1128/AAC.02710-13. Epub 2014 Jan 27.

PMID:
24468782
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Gene expression studies for the analysis of domoic acid production in the marine diatom Pseudo-nitzschia multiseries.

Boissonneault KR, Henningsen BM, Bates SS, Robertson DL, Milton S, Pelletier J, Hogan DA, Housman DE.

BMC Mol Biol. 2013 Nov 1;14:25. doi: 10.1186/1471-2199-14-25.

PMID:
24180290
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

bioNerDS: exploring bioinformatics' database and software use through literature mining.

Duck G, Nenadic G, Brass A, Robertson DL, Stevens R.

BMC Bioinformatics. 2013 Jun 15;14:194. doi: 10.1186/1471-2105-14-194.

PMID:
23768135
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Cataloging the biomedical world of pain through semi-automated curation of molecular interactions.

Jamieson DG, Roberts PM, Robertson DL, Sidders B, Nenadic G.

Database (Oxford). 2013 May 23;2013:bat033. doi: 10.1093/database/bat033. Print 2013.

PMID:
23707966
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Modular biological function is most effectively captured by combining molecular interaction data types.

Ames RM, Macpherson JI, Pinney JW, Lovell SC, Robertson DL.

PLoS One. 2013 May 3;8(5):e62670. doi: 10.1371/journal.pone.0062670. Print 2013.

PMID:
23658761
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The role of protein interactions in mediating essentiality and synthetic lethality.

Talavera D, Robertson DL, Lovell SC.

PLoS One. 2013 Apr 29;8(4):e62866. doi: 10.1371/journal.pone.0062866. Print 2013.

PMID:
23638160
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Alternative splicing and protein interaction data sets.

Talavera D, Robertson DL, Lovell SC.

Nat Biotechnol. 2013 Apr;31(4):292-3. doi: 10.1038/nbt.2540. No abstract available.

PMID:
23563420
[PubMed - indexed for MEDLINE]
16.

Sensitive cell-based assay for determination of human immunodeficiency virus type 1 coreceptor tropism.

Weber J, Vazquez AC, Winner D, Gibson RM, Rhea AM, Rose JD, Wylie D, Henry K, Wright A, King K, Archer J, Poveda E, Soriano V, Robertson DL, Olivo PD, Arts EJ, Quiñones-Mateu ME.

J Clin Microbiol. 2013 May;51(5):1517-27. doi: 10.1128/JCM.00092-13. Epub 2013 Mar 13.

PMID:
23486708
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

SIVagm infection in wild African green monkeys from South Africa: epidemiology, natural history, and evolutionary considerations.

Ma D, Jasinska A, Kristoff J, Grobler JP, Turner T, Jung Y, Schmitt C, Raehtz K, Feyertag F, Martinez Sosa N, Wijewardana V, Burke DS, Robertson DL, Tracy R, Pandrea I, Freimer N, Apetrei C; International Vervet Research Consortium.

PLoS Pathog. 2013 Jan;9(1):e1003011. doi: 10.1371/journal.ppat.1003011. Epub 2013 Jan 17.

PMID:
23349627
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The origins of the evolutionary signal used to predict protein-protein interactions.

Swapna LS, Srinivasan N, Robertson DL, Lovell SC.

BMC Evol Biol. 2012 Dec 6;12:238. doi: 10.1186/1471-2148-12-238.

PMID:
23217198
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Use of four next-generation sequencing platforms to determine HIV-1 coreceptor tropism.

Archer J, Weber J, Henry K, Winner D, Gibson R, Lee L, Paxinos E, Arts EJ, Robertson DL, Mimms L, Quiñones-Mateu ME.

PLoS One. 2012;7(11):e49602. doi: 10.1371/journal.pone.0049602. Epub 2012 Nov 14.

PMID:
23166726
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Towards semi-automated curation: using text mining to recreate the HIV-1, human protein interaction database.

Jamieson DG, Gerner M, Sarafraz F, Nenadic G, Robertson DL.

Database (Oxford). 2012 Apr 23;2012:bas023. doi: 10.1093/database/bas023. Print 2012.

PMID:
22529179
[PubMed - indexed for MEDLINE]
Free PMC Article

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