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Results: 1 to 20 of 27

1.

Characterization of the Staphylococcus aureus rRNA methyltransferase encoded by orfX, the gene containing the staphylococcal chromosome Cassette mec (SCCmec) insertion site.

Boundy S, Safo MK, Wang L, Musayev FN, O'Farrell HC, Rife JP, Archer GL.

J Biol Chem. 2013 Jan 4;288(1):132-40. doi: 10.1074/jbc.M112.385138. Epub 2012 Nov 13.

PMID:
23150671
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Staphylococcus aureus and Escherichia coli have disparate dependences on KsgA for growth and ribosome biogenesis.

O'Farrell HC, Rife JP.

BMC Microbiol. 2012 Oct 24;12:244. doi: 10.1186/1471-2180-12-244.

PMID:
23095113
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Structural insights into methyltransferase KsgA function in 30S ribosomal subunit biogenesis.

Boehringer D, O'Farrell HC, Rife JP, Ban N.

J Biol Chem. 2012 Mar 23;287(13):10453-9. doi: 10.1074/jbc.M111.318121. Epub 2012 Feb 3.

PMID:
22308031
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Control of substrate specificity by a single active site residue of the KsgA methyltransferase.

O'Farrell HC, Musayev FN, Scarsdale JN, Rife JP.

Biochemistry. 2012 Jan 10;51(1):466-74. doi: 10.1021/bi201539j. Epub 2011 Dec 22.

PMID:
22142337
[PubMed - indexed for MEDLINE]
5.

The aminoglycoside resistance methyltransferases from the ArmA/Rmt family operate late in the 30S ribosomal biogenesis pathway.

Zarubica T, Baker MR, Wright HT, Rife JP.

RNA. 2011 Feb;17(2):346-55. doi: 10.1261/rna.2314311. Epub 2010 Dec 22.

PMID:
21177880
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Site-directed mutants of 16S rRNA reveal important RNA domains for KsgA function and 30S subunit assembly.

Desai PM, Culver GM, Rife JP.

Biochemistry. 2011 Feb 8;50(5):854-63. doi: 10.1021/bi101005r. Epub 2011 Jan 11.

PMID:
21142019
[PubMed - indexed for MEDLINE]
7.

Binding of adenosine-based ligands to the MjDim1 rRNA methyltransferase: implications for reaction mechanism and drug design.

O'Farrell HC, Musayev FN, Scarsdale JN, Rife JP.

Biochemistry. 2010 Mar 30;49(12):2697-704. doi: 10.1021/bi901875x.

PMID:
20163168
[PubMed - indexed for MEDLINE]
8.

Structural and functional divergence within the Dim1/KsgA family of rRNA methyltransferases.

Pulicherla N, Pogorzala LA, Xu Z, O Farrell HC, Musayev FN, Scarsdale JN, Sia EA, Culver GM, Rife JP.

J Mol Biol. 2009 Sep 4;391(5):884-93. doi: 10.1016/j.jmb.2009.06.015. Epub 2009 Jun 9.

PMID:
19520088
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Scintillation proximity assay for measurement of RNA methylation.

Baker MR, Zarubica T, Wright HT, Rife JP.

Nucleic Acids Res. 2009 Mar;37(4):e32. doi: 10.1093/nar/gkn1038. Epub 2009 Jan 30.

PMID:
19181706
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Mechanistic insight into the ribosome biogenesis functions of the ancient protein KsgA.

Connolly K, Rife JP, Culver G.

Mol Microbiol. 2008 Dec;70(5):1062-75. doi: 10.1111/j.1365-2958.2008.06485.x.

PMID:
18990185
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Sequence and structural evolution of the KsgA/Dim1 methyltransferase family.

O'Farrell HC, Xu Z, Culver GM, Rife JP.

BMC Res Notes. 2008 Oct 29;1:108. doi: 10.1186/1756-0500-1-108.

PMID:
18959795
[PubMed]
Free PMC Article
12.

A conserved rRNA methyltransferase regulates ribosome biogenesis.

Xu Z, O'Farrell HC, Rife JP, Culver GM.

Nat Struct Mol Biol. 2008 May;15(5):534-6. doi: 10.1038/nsmb.1408. Epub 2008 Apr 6.

PMID:
18391965
[PubMed - indexed for MEDLINE]
13.

Breaking the cycle of translation.

Rife JP, Culver GM.

Mol Cell. 2007 Nov 30;28(4):517-9.

PMID:
18042447
[PubMed - indexed for MEDLINE]
Free Article
14.

The adenosine dimethyltransferase KsgA recognizes a specific conformational state of the 30S ribosomal subunit.

Desai PM, Rife JP.

Arch Biochem Biophys. 2006 May 15;449(1-2):57-63. Epub 2006 Mar 29.

PMID:
16620761
[PubMed - indexed for MEDLINE]
15.

Recognition of a complex substrate by the KsgA/Dim1 family of enzymes has been conserved throughout evolution.

O'Farrell HC, Pulicherla N, Desai PM, Rife JP.

RNA. 2006 May;12(5):725-33. Epub 2006 Mar 15.

PMID:
16540698
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Sulfonamide cross-reactivity: fact or fiction?

Johnson KK, Green DL, Rife JP, Limon L.

Ann Pharmacother. 2005 Feb;39(2):290-301. Epub 2005 Jan 11. Review. Erratum in: Ann Pharmacother. 2005 Jul-Aug;39(7-8):1373.

PMID:
15644481
[PubMed - indexed for MEDLINE]
17.

Crystal structure of KsgA, a universally conserved rRNA adenine dimethyltransferase in Escherichia coli.

O'Farrell HC, Scarsdale JN, Rife JP.

J Mol Biol. 2004 May 28;339(2):337-53.

PMID:
15136037
[PubMed - indexed for MEDLINE]
18.

Crystallization and preliminary X-ray diffraction analysis of KsgA, a universally conserved RNA adenine dimethyltransferase in Escherichia coli.

O'Farrell HC, Musayev FN, Scarsdale JN, Wright HT, Rife JP.

Acta Crystallogr D Biol Crystallogr. 2003 Aug;59(Pt 8):1490-2. Epub 2003 Jul 23.

PMID:
12876362
[PubMed - indexed for MEDLINE]
19.

Crystal structures of r(GGUCACAGCCC)2.

Kacer V, Scaringe SA, Scarsdale JN, Rife JP.

Acta Crystallogr D Biol Crystallogr. 2003 Mar;59(Pt 3):423-32. Epub 2003 Feb 21.

PMID:
12595698
[PubMed - indexed for MEDLINE]
20.

The structure of helix III in Xenopus oocyte 5 S rRNA: an RNA stem containing a two-nucleotide bulge.

Huber PW, Rife JP, Moore PB.

J Mol Biol. 2001 Sep 28;312(4):823-32.

PMID:
11575935
[PubMed - indexed for MEDLINE]

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