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Results: 15

1.

Arabidopsis MSH1 mutation alters the epigenome and produces heritable changes in plant growth.

Virdi KS, Laurie JD, Xu YZ, Yu J, Shao MR, Sanchez R, Kundariya H, Wang D, Riethoven JJ, Wamboldt Y, Arrieta-Montiel MP, Shedge V, Mackenzie SA.

Nat Commun. 2015 Feb 27;6:6386. doi: 10.1038/ncomms7386.

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Dehydration stress memory genes of Zea mays; comparison with Arabidopsis thaliana.

Ding Y, Virlouvet L, Liu N, Riethoven JJ, Fromm M, Avramova Z.

BMC Plant Biol. 2014 May 22;14:141. doi: 10.1186/1471-2229-14-141.

4.

Deep RNA sequencing reveals hidden features and dynamics of early gene transcription in Paramecium bursaria chlorella virus 1.

Blanc G, Mozar M, Agarkova IV, Gurnon JR, Yanai-Balser G, Rowe JM, Xia Y, Riethoven JJ, Dunigan DD, Van Etten JL.

PLoS One. 2014 Mar 7;9(3):e90989. doi: 10.1371/journal.pone.0090989. eCollection 2014.

5.

Direct staining with major histocompatibility complex class II dextramers permits detection of antigen-specific, autoreactive CD4 T cells in situ.

Massilamany C, Gangaplara A, Jia T, Elowsky C, Kang G, Riethoven JJ, Li Q, Zhou Y, Reddy J.

PLoS One. 2014 Jan 27;9(1):e87519. doi: 10.1371/journal.pone.0087519. eCollection 2014.

6.

De novo transcriptome assembly from fat body and flight muscles transcripts to identify morph-specific gene expression profiles in Gryllus firmus.

Nanoth Vellichirammal N, Zera AJ, Schilder RJ, Wehrkamp C, Riethoven JJ, Brisson JA.

PLoS One. 2014 Jan 8;9(1):e82129. doi: 10.1371/journal.pone.0082129. eCollection 2014.

7.

Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.

Ding Y, Liu N, Virlouvet L, Riethoven JJ, Fromm M, Avramova Z.

BMC Plant Biol. 2013 Dec 30;13:229. doi: 10.1186/1471-2229-13-229.

8.

Microarray analysis of gene expression profiles in cells transfected with nonviral vectors.

Plautz SA, Boanca G, Riethoven JJ, Pannier AK.

Mol Ther. 2011 Dec;19(12):2144-51. doi: 10.1038/mt.2011.161. Epub 2011 Aug 9.

9.

Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana.

van Dijk K, Ding Y, Malkaram S, Riethoven JJ, Liu R, Yang J, Laczko P, Chen H, Xia Y, Ladunga I, Avramova Z, Fromm M.

BMC Plant Biol. 2010 Nov 5;10:238. doi: 10.1186/1471-2229-10-238.

10.

Weakly positioned nucleosomes enhance the transcriptional competency of chromatin.

Belch Y, Yang J, Liu Y, Malkaram SA, Liu R, Riethoven JJ, Ladunga I.

PLoS One. 2010 Sep 24;5(9):e12984. doi: 10.1371/journal.pone.0012984.

11.

Exon-primed intron-crossing (EPIC) markers for non-model teleost fishes.

Li C, Riethoven JJ, Ma L.

BMC Evol Biol. 2010 Mar 31;10:90. doi: 10.1186/1471-2148-10-90.

12.

The Arabidopsis chromatin modifier ATX1, the myotubularin-like AtMTM and the response to drought.

Ding Y, Lapko H, Ndamukong I, Xia Y, Al-Abdallat A, Lalithambika S, Sadder M, Saleh A, Fromm M, Riethoven JJ, Lu G, Avramova Z.

Plant Signal Behav. 2009 Nov;4(11):1049-58. Epub 2009 Nov 15.

13.

AltTrans: transcript pattern variants annotated for both alternative splicing and alternative polyadenylation.

Le Texier V, Riethoven JJ, Kumanduri V, Gopalakrishnan C, Lopez F, Gautheret D, Thanaraj TA.

BMC Bioinformatics. 2006 Mar 23;7:169.

14.

ASD: a bioinformatics resource on alternative splicing.

Stamm S, Riethoven JJ, Le Texier V, Gopalakrishnan C, Kumanduri V, Tang Y, Barbosa-Morais NL, Thanaraj TA.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D46-55.

15.

ASD: the Alternative Splicing Database.

Thanaraj TA, Stamm S, Clark F, Riethoven JJ, Le Texier V, Muilu J.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D64-9.

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