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Results: 1 to 20 of 24

1.

A minimal model of peptide binding predicts ensemble properties of serum antibodies.

Greiff V, Redestig H, Lück J, Bruni N, Valai A, Hartmann S, Rausch S, Schuchhardt J, Or-Guil M.

BMC Genomics. 2012 Feb 21;13:79. doi: 10.1186/1471-2164-13-79.

PMID:
22353141
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes.

Diaz C, Kusano M, Sulpice R, Araki M, Redestig H, Saito K, Stitt M, Shin R.

BMC Syst Biol. 2011 Nov 21;5:192. doi: 10.1186/1752-0509-5-192.

PMID:
22104211
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics.

Redestig H, Kusano M, Ebana K, Kobayashi M, Oikawa A, Okazaki Y, Matsuda F, Arita M, Fujita N, Saito K.

BMC Syst Biol. 2011 Oct 28;5:176. doi: 10.1186/1752-0509-5-176.

PMID:
22034874
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Detection and interpretation of metabolite-transcript coresponses using combined profiling data.

Redestig H, Costa IG.

Bioinformatics. 2011 Jul 1;27(13):i357-65. doi: 10.1093/bioinformatics/btr231.

PMID:
21685093
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Exploring matrix effects and quantification performance in metabolomics experiments using artificial biological gradients.

Redestig H, Kobayashi M, Saito K, Kusano M.

Anal Chem. 2011 Jul 15;83(14):5645-51. doi: 10.1021/ac200786y. Epub 2011 Jun 28.

PMID:
21630645
[PubMed - indexed for MEDLINE]
6.

Plasma membrane aquaporin AqpZ protein is essential for glucose metabolism during photomixotrophic growth of Synechocystis sp. PCC 6803.

Akai M, Onai K, Kusano M, Sato M, Redestig H, Toyooka K, Morishita M, Miyake H, Hazama A, Checchetto V, Szabò I, Matsuoka K, Saito K, Yasui M, Ishiura M, Uozumi N.

J Biol Chem. 2011 Jul 15;286(28):25224-35. doi: 10.1074/jbc.M111.236380. Epub 2011 May 10.

PMID:
21558269
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Covering chemical diversity of genetically-modified tomatoes using metabolomics for objective substantial equivalence assessment.

Kusano M, Redestig H, Hirai T, Oikawa A, Matsuda F, Fukushima A, Arita M, Watanabe S, Yano M, Hiwasa-Tanase K, Ezura H, Saito K.

PLoS One. 2011 Feb 16;6(2):e16989. doi: 10.1371/journal.pone.0016989.

PMID:
21359231
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Metabolomic approaches toward understanding nitrogen metabolism in plants.

Kusano M, Fukushima A, Redestig H, Saito K.

J Exp Bot. 2011 Feb;62(4):1439-53. doi: 10.1093/jxb/erq417. Epub 2011 Jan 10. Review.

PMID:
21220784
[PubMed - indexed for MEDLINE]
Free Article
9.

Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach.

Fukushima A, Kusano M, Redestig H, Arita M, Saito K.

BMC Syst Biol. 2011 Jan 1;5:1. doi: 10.1186/1752-0509-5-1.

PMID:
21194489
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis.

Redestig H, Kusano M, Fukushima A, Matsuda F, Saito K, Arita M.

BMC Bioinformatics. 2010 Apr 29;11:214. doi: 10.1186/1471-2105-11-214.

PMID:
20426876
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Comparative metabolomics charts the impact of genotype-dependent methionine accumulation in Arabidopsis thaliana.

Kusano M, Fukushima A, Redestig H, Kobayashi M, Otsuki H, Onouchi H, Naito S, Hirai MY, Saito K.

Amino Acids. 2010 Oct;39(4):1013-21. doi: 10.1007/s00726-010-0562-y. Epub 2010 Mar 31.

PMID:
20354740
[PubMed - indexed for MEDLINE]
12.

TargetSearch--a Bioconductor package for the efficient preprocessing of GC-MS metabolite profiling data.

Cuadros-Inostroza A, Caldana C, Redestig H, Kusano M, Lisec J, Peña-Cortés H, Willmitzer L, Hannah MA.

BMC Bioinformatics. 2009 Dec 16;10:428. doi: 10.1186/1471-2105-10-428.

PMID:
20015393
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Integrated omics approaches in plant systems biology.

Fukushima A, Kusano M, Redestig H, Arita M, Saito K.

Curr Opin Chem Biol. 2009 Dec;13(5-6):532-8. doi: 10.1016/j.cbpa.2009.09.022. Review.

PMID:
19837627
[PubMed - indexed for MEDLINE]
14.

Compensation for systematic cross-contribution improves normalization of mass spectrometry based metabolomics data.

Redestig H, Fukushima A, Stenlund H, Moritz T, Arita M, Saito K, Kusano M.

Anal Chem. 2009 Oct 1;81(19):7974-80. doi: 10.1021/ac901143w.

PMID:
19743813
[PubMed - indexed for MEDLINE]
15.

Metabolome-ionome-biomass interactions: What can we learn about salt stress by multiparallel phenotyping?

Sanchez DH, Redestig H, Krämer U, Udvardi MK, Kopka J.

Plant Signal Behav. 2008 Aug;3(8):598-600.

PMID:
19704810
[PubMed]
Free PMC Article
16.

Global mRNA changes in microarray experiments.

Hannah MA, Redestig H, Leisse A, Willmitzer L.

Nat Biotechnol. 2008 Jul;26(7):741-2. doi: 10.1038/nbt0708-741. No abstract available.

PMID:
18612292
[PubMed - indexed for MEDLINE]
17.

Integrative functional genomics of salt acclimatization in the model legume Lotus japonicus.

Sanchez DH, Lippold F, Redestig H, Hannah MA, Erban A, Krämer U, Kopka J, Udvardi MK.

Plant J. 2008 Mar;53(6):973-87. Epub 2007 Nov 29.

PMID:
18047558
[PubMed - indexed for MEDLINE]
18.

Identification of metabolic and biomass QTL in Arabidopsis thaliana in a parallel analysis of RIL and IL populations.

Lisec J, Meyer RC, Steinfath M, Redestig H, Becher M, Witucka-Wall H, Fiehn O, Törjék O, Selbig J, Altmann T, Willmitzer L.

Plant J. 2008 Mar;53(6):960-72. Epub 2007 Nov 28.

PMID:
18047556
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana.

Redestig H, Weicht D, Selbig J, Hannah MA.

BMC Bioinformatics. 2007 Nov 18;8:454.

PMID:
18021423
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Integrating functional knowledge during sample clustering for microarray data using unsupervised decision trees.

Redestig H, Repsilber D, Sohler F, Selbig J.

Biom J. 2007 Apr;49(2):214-29.

PMID:
17476945
[PubMed - indexed for MEDLINE]

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