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Results: 1 to 20 of 86

1.

Using Genomics To Standardize Population Analysis Profile-Area under the Curve Ratio for Vancomycin-Intermediate Staphylococcus aureus.

Read TD, Satola SW.

J Clin Microbiol. 2014 Oct;52(10):3824-6. doi: 10.1128/JCM.01536-14. Epub 2014 Jul 23. No abstract available.

PMID:
25056326
[PubMed - in process]
2.

Using Crude Whole-Genome Assemblies of Neisseria gonorrhoeae as a Platform for Strain Analysis: Clonal Spread of Gonorrhea Infection in Saskatchewan, Canada.

Vidovic S, Caron C, Taheri A, Thakur SD, Read TD, Kusalik A, Dillon JA.

J Clin Microbiol. 2014 Oct;52(10):3772-6. doi: 10.1128/JCM.01502-14. Epub 2014 Jul 23.

PMID:
25056324
[PubMed - in process]
3.

Direct amplification, sequencing and profiling of Chlamydia trachomatis strains in single and mixed infection clinical samples.

Joseph SJ, Li B, Ghonasgi T, Haase CP, Qin ZS, Dean D, Read TD.

PLoS One. 2014 Jun 27;9(6):e99290. doi: 10.1371/journal.pone.0099290. eCollection 2014.

PMID:
24971628
[PubMed - in process]
Free PMC Article
4.

Development of oxacillin resistance in a patient with recurrent Staphylococcus aureus bacteremia.

Burd EM, Alam MT, Passalacqua KD, Kalokhe AS, Eaton ME, Satola SW, Kraft CS, Read TD.

J Clin Microbiol. 2014 Aug;52(8):3114-7. doi: 10.1128/JCM.00615-14. Epub 2014 May 21.

PMID:
24850355
[PubMed - in process]
5.

Phase-variable expression of lptA modulates the resistance of Neisseria gonorrhoeae to cationic antimicrobial peptides.

Kandler JL, Joseph SJ, Balthazar JT, Dhulipala V, Read TD, Jerse AE, Shafer WM.

Antimicrob Agents Chemother. 2014 Jul;58(7):4230-3. doi: 10.1128/AAC.03108-14. Epub 2014 May 12.

PMID:
24820072
[PubMed - in process]
6.

Functional genomic characterization of virulence factors from necrotizing fasciitis-causing strains of Aeromonas hydrophila.

Grim CJ, Kozlova EV, Ponnusamy D, Fitts EC, Sha J, Kirtley ML, van Lier CJ, Tiner BL, Erova TE, Joseph SJ, Read TD, Shak JR, Joseph SW, Singletary E, Felland T, Baze WB, Horneman AJ, Chopra AK.

Appl Environ Microbiol. 2014 Jul;80(14):4162-83. doi: 10.1128/AEM.00486-14. Epub 2014 May 2.

PMID:
24795370
[PubMed - in process]
7.

Dissecting vancomycin-intermediate resistance in staphylococcus aureus using genome-wide association.

Alam MT, Petit RA 3rd, Crispell EK, Thornton TA, Conneely KN, Jiang Y, Satola SW, Read TD.

Genome Biol Evol. 2014 Apr 30;6(5):1174-85. doi: 10.1093/gbe/evu092.

PMID:
24787619
[PubMed - in process]
Free PMC Article
8.

Predicting the virulence of MRSA from its genome sequence.

Laabei M, Recker M, Rudkin JK, Aldeljawi M, Gulay Z, Sloan TJ, Williams P, Endres JL, Bayles KW, Fey PD, Yajjala VK, Widhelm T, Hawkins E, Lewis K, Parfett S, Scowen L, Peacock SJ, Holden M, Wilson D, Read TD, van den Elsen J, Priest NK, Feil EJ, Hurst LD, Josefsson E, Massey RC.

Genome Res. 2014 May;24(5):839-49. doi: 10.1101/gr.165415.113. Epub 2014 Apr 9.

PMID:
24717264
[PubMed - in process]
Free PMC Article
9.

The complete mitochondrial genome sequence of the world's largest fish, the whale shark (Rhincodon typus), and its comparison with those of related shark species.

Alam MT, Petit RA 3rd, Read TD, Dove AD.

Gene. 2014 Apr 10;539(1):44-9. doi: 10.1016/j.gene.2014.01.064. Epub 2014 Feb 4.

PMID:
24508271
[PubMed - indexed for MEDLINE]
10.

Genetic evidence for the involvement of the S-layer protein gene sap and the sporulation genes spo0A, spo0B, and spo0F in Phage AP50c infection of Bacillus anthracis.

Plaut RD, Beaber JW, Zemansky J, Kaur AP, George M, Biswas B, Henry M, Bishop-Lilly KA, Mokashi V, Hannah RM, Pope RK, Read TD, Stibitz S, Calendar R, Sozhamannan S.

J Bacteriol. 2014 Mar;196(6):1143-54. doi: 10.1128/JB.00739-13. Epub 2013 Dec 20.

PMID:
24363347
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

IsdB-dependent hemoglobin binding is required for acquisition of heme by Staphylococcus aureus.

Pishchany G, Sheldon JR, Dickson CF, Alam MT, Read TD, Gell DA, Heinrichs DE, Skaar EP.

J Infect Dis. 2014 Jun 1;209(11):1764-72. doi: 10.1093/infdis/jit817. Epub 2013 Dec 13.

PMID:
24338348
[PubMed - indexed for MEDLINE]
12.

Genome Sequencing of Four Strains of Rickettsia prowazekii, the Causative Agent of Epidemic Typhus, Including One Flying Squirrel Isolate.

Bishop-Lilly KA, Ge H, Butani A, Osborne B, Verratti K, Mokashi V, Nagarajan N, Pop M, Read TD, Richards AL.

Genome Announc. 2013 Jun 27;1(3). pii: e00399-13. doi: 10.1128/genomeA.00399-13.

PMID:
23814035
[PubMed]
Free PMC Article
13.

Characterization of Aeromonas hydrophila wound pathotypes by comparative genomic and functional analyses of virulence genes.

Grim CJ, Kozlova EV, Sha J, Fitts EC, van Lier CJ, Kirtley ML, Joseph SJ, Read TD, Burd EM, Tall BD, Joseph SW, Horneman AJ, Chopra AK, Shak JR.

MBio. 2013 Apr 23;4(2):e00064-13. doi: 10.1128/mBio.00064-13.

PMID:
23611906
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Comparative analysis of Chlamydia psittaci genomes reveals the recent emergence of a pathogenic lineage with a broad host range.

Read TD, Joseph SJ, Didelot X, Liang B, Patel L, Dean D.

MBio. 2013 Mar 26;4(2). pii: e00604-12. doi: 10.1128/mBio.00604-12.

PMID:
23532978
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A multiplexed microfluidic PCR assay for sensitive and specific point-of-care detection of Chlamydia trachomatis.

Dean D, Turingan RS, Thomann HU, Zolotova A, Rothschild J, Joseph SJ, Read TD, Tan E, Selden RF.

PLoS One. 2012;7(12):e51685. doi: 10.1371/journal.pone.0051685. Epub 2012 Dec 14.

PMID:
23272140
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Whole genome sequencing of phage resistant Bacillus anthracis mutants reveals an essential role for cell surface anchoring protein CsaB in phage AP50c adsorption.

Bishop-Lilly KA, Plaut RD, Chen PE, Akmal A, Willner KM, Butani A, Dorsey S, Mokashi V, Mateczun AJ, Chapman C, George M, Luu T, Read TD, Calendar R, Stibitz S, Sozhamannan S.

Virol J. 2012 Oct 26;9:246. doi: 10.1186/1743-422X-9-246.

PMID:
23098174
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Strand-specific RNA-seq reveals ordered patterns of sense and antisense transcription in Bacillus anthracis.

Passalacqua KD, Varadarajan A, Weist C, Ondov BD, Byrd B, Read TD, Bergman NH.

PLoS One. 2012;7(8):e43350. doi: 10.1371/journal.pone.0043350. Epub 2012 Aug 22.

PMID:
22937038
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Population genomics of Chlamydia trachomatis: insights on drift, selection, recombination, and population structure.

Joseph SJ, Didelot X, Rothschild J, de Vries HJ, Morré SA, Read TD, Dean D.

Mol Biol Evol. 2012 Dec;29(12):3933-46. doi: 10.1093/molbev/mss198. Epub 2012 Aug 13.

PMID:
22891032
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

A mutation in the PP2C phosphatase gene in a Staphylococcus aureus USA300 clinical isolate with reduced susceptibility to vancomycin and daptomycin.

Passalacqua KD, Satola SW, Crispell EK, Read TD.

Antimicrob Agents Chemother. 2012 Oct;56(10):5212-23. doi: 10.1128/AAC.05770-11. Epub 2012 Jul 30.

PMID:
22850507
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Genomic characterization of the Bacillus cereus sensu lato species: backdrop to the evolution of Bacillus anthracis.

Zwick ME, Joseph SJ, Didelot X, Chen PE, Bishop-Lilly KA, Stewart AC, Willner K, Nolan N, Lentz S, Thomason MK, Sozhamannan S, Mateczun AJ, Du L, Read TD.

Genome Res. 2012 Aug;22(8):1512-24. doi: 10.1101/gr.134437.111. Epub 2012 May 29.

PMID:
22645259
[PubMed - indexed for MEDLINE]
Free PMC Article

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